Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02616
Subject:
XM_006501921.3
Aligned Length:
1011
Identities:
599
Gaps:
345

Alignment

Query    1  ATGGGGAAAGACTATTATTGCATTTTGGGAATTGAGAAAGGAGCTTCAGATGAAGATATTAAAAAGGCTTACCG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AAAACAAGCCCTCAAATTTCATCCGGACAAGAACAAATCTCCTCAGGCAGAGGAAAAATTTAAAGAGGTCGCAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AAGCTTATGAAGTATTGAGTGATCCTAAAAAGAGAGAAATATATGATCAGTTTGGGGAGGAAGGGTTGAAAGGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GGAGCAGGAGGTACTGATGGACAAGGAGGTACCTTCCGGTACACCTTTCATGGCGATCCTCATGCTACATTTGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGCATTTTTCGGAGGGTCCAACCCCTTTGAAATTTTCTTTGGAAGACGAATGGGTGGTGGTAGAGATTCTGAAG  370
                                                             ||||||||.|||.||||||||||||
Sbjct    1  -------------------------------------------------ATGGGTGGAGGTCGAGATTCTGAAG  25

Query  371  AAATGGAAATAGATGGTGATCCTTTTAGTGCCTTTGGTTTCAGCATGAATGGATATCCAAGAGACAGGAATTCT  444
            ||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct   26  AAATGGAAATAGATGGAGATCCCTTTAGTGCCTTTGGATTCAGCATGAATGGATATCCAAGAGACAGGAATTCT  99

Query  445  GTGGGGCCATCCCGCCTCAAACAAGATCCTCCAGTTATTCATGAACTTAGAGTATCACTTGAAGAGATATATAG  518
            |||||.||.|||||.|||||||||||.|||||..|||||||||||||||.||||||.||||||||.||||||||
Sbjct  100  GTGGGACCCTCCCGTCTCAAACAAGACCCTCCCATTATTCATGAACTTAAAGTATCGCTTGAAGAAATATATAG  173

Query  519  TGGTTGTACCAAACGGATGAAGATTTCTCGAAAAAGGCTAAACGCTGATGGAAGGAGTTACAGATCTGAGGACA  592
            |||.||.|||||||||||||||||||||||||||||..||||..||||.|||||||||||||||||||||||||
Sbjct  174  TGGCTGCACCAAACGGATGAAGATTTCTCGAAAAAGATTAAATCCTGACGGAAGGAGTTACAGATCTGAGGACA  247

Query  593  AAATTCTTACCATTGAGATTAAAAAAGGGTGGAAAGAAGGCACCAAAATTACTTTTCCAAGAGAAGGAGATGAA  666
            |||||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||.||.|||||.||||||
Sbjct  248  AAATTCTCACCATTGAGATCAAAAAAGGGTGGAAAGAAGGCACCAAAATCACTTTTCCGAGGGAAGGCGATGAA  321

Query  667  ACACCAAATAGTATTCCAGCAGACATTGTTTTTATCATTAAAGACAAAGATCATCCAAAATTTAAAAGGGATGG  740
            ||||||||||||||.||||||||||||||||||.|.||||||||||||||.|||||.||.||||||||.||.||
Sbjct  322  ACACCAAATAGTATCCCAGCAGACATTGTTTTTGTTATTAAAGACAAAGAACATCCCAAGTTTAAAAGAGACGG  395

Query  741  ATCAAATATAATTTATACTGCTAAAATTAGTTTACGAGAGGCATTGTGTGGCTGCTCAATTAATGTACCAACAC  814
            ||||||||||.|||||||||||||||||||||||||.|||||||||||||||||||||.|||||||.||||||.
Sbjct  396  ATCAAATATAGTTTATACTGCTAAAATTAGTTTACGGGAGGCATTGTGTGGCTGCTCACTTAATGTGCCAACAA  469

Query  815  TGGATGGAAGAAACATACCTATGTCAGTAAATGATATTGTGAAACCCGGAATGAGGAGAAGAATTATTGGATAT  888
            ||||.|||||||||.|||||||||||||.|.|||||||||||||||.||.||||||||||||.|||||||||||
Sbjct  470  TGGACGGAAGAAACCTACCTATGTCAGTCACTGATATTGTGAAACCTGGGATGAGGAGAAGAGTTATTGGATAT  543

Query  889  GGGCTGCCATTTCCAAAAAATCCTGACCAACGTGGTGACCTTCTAATAGAATTTGAGGTGTCCTTCCCAGATAC  962
            ||||||||||||||||||||.||||||||.|||||.|||||.||.|||||||||||.||||||||||||||...
Sbjct  544  GGGCTGCCATTTCCAAAAAACCCTGACCAGCGTGGCGACCTACTGATAGAATTTGATGTGTCCTTCCCAGACGT  617

Query  963  TATATCTTCTTCATCCAAAGAAGTACTTAGGAAACATCTTCCTGCCTCA  1011
            .||||||.|..||||||||||..|.||.|||||.|||||.||||||||.
Sbjct  618  CATATCTGCAGCATCCAAAGAGATCCTGAGGAAGCATCTCCCTGCCTCC  666