Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02669
- Subject:
- XM_011240074.1
- Aligned Length:
- 1711
- Identities:
- 1015
- Gaps:
- 602
Alignment
Query 1 ATGAACGTGGTTTTTGCTGTGAAGCAGTACATTTCCAAAATGATAGAGGACAGCGGGCCTGGTATGAAAGTACT 74
|||||.|||||.|||||||||||||||||.|||||||||||||||||||||||||||||.||.|||||.|||||
Sbjct 1 ATGAATGTGGTCTTTGCTGTGAAGCAGTATATTTCCAAAATGATAGAGGACAGCGGGCCGGGCATGAAGGTACT 74
Query 75 TCTCATGGATAAAGAGACGACTGGCATAGTGAGTATGGTATACACACAATCGGAGATTCTACAGAAGGAAGTGT 148
|||||||||||||||.||||||||.||||||||||||||.||||||||.||.||||||||.|||||||||||.|
Sbjct 75 TCTCATGGATAAAGAAACGACTGGTATAGTGAGTATGGTCTACACACAGTCAGAGATTCTTCAGAAGGAAGTAT 148
Query 149 ACCTCTTTGAACGCATTGATTCTCAAAATCGAGAGATCATGAAACACCTGAAGGCAATTTGTTTTCTTCGACCT 222
|||||||.|||||.|||||||||||||||||||||||||||||||||||.||.|||||||||||.||||||||.
Sbjct 149 ACCTCTTCGAACGAATTGATTCTCAAAATCGAGAGATCATGAAACACCTAAAAGCAATTTGTTTCCTTCGACCC 222
Query 223 ACAAAGGAGAATGTGGATTATATTATTCAGGAGCTCCGAAGACCCAAATACACTATATATTTCATTTATTTCAG 296
|||||||||||||||||.|||.|.||.||||||||||||||||||||.||||..||||||||.|||||||||||
Sbjct 223 ACAAAGGAGAATGTGGAATATCTGATCCAGGAGCTCCGAAGACCCAAGTACAGCATATATTTTATTTATTTCAG 296
Query 297 TAATGTGATCAGCAAGAGTGACGTGAAGTCATTGGCTGAAGCTGATGAACAGGAAGTTGTGGCTGAGGTTCAGG 370
|||||||||||||||||||||||||||||||.|||||||||||||.||.|||||||||||||||||.|||||||
Sbjct 297 TAATGTGATCAGCAAGAGTGACGTGAAGTCACTGGCTGAAGCTGACGAGCAGGAAGTTGTGGCTGAAGTTCAGG 370
Query 371 AATTTTATGGTGATTACATTGCTGTGAACCCACATTTGTTTTCCCTCAATATTTTGGGTTGCTGCCAGGGTCGA 444
||||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||.|||||||||
Sbjct 371 AATTTTATGGTGATTACATTGCGGTGAATCCACATTTGTTTTCTCTCAATATTTTGGGTTGCTGTCAGGGTCGA 444
Query 445 AATTGGGATCCAGCCCAGCTATCTAGAACAACTCAAGGGCTTACAGCTCTCCTTTTATCTCTGAAGAAGTGTCC 518
|||||||||||||||||||||||.|||||.|||||||||||.||||||||||||||.||||||||||||||.||
Sbjct 445 AATTGGGATCCAGCCCAGCTATCAAGAACGACTCAAGGGCTGACAGCTCTCCTTTTGTCTCTGAAGAAGTGCCC 518
Query 519 CATGATTCGTTATCAGCTCTCATCAGAGGCAGCAAAGAGACTTGCAGAGTGCGTTAAGCAAGTGATAACTAAAG 592
||||||||||||||||||.|||||||||||.|||||||||||.|.|||.||.||||||||||||||||.|||||
Sbjct 519 CATGATTCGTTATCAGCTTTCATCAGAGGCTGCAAAGAGACTGGGAGAATGTGTTAAGCAAGTGATAAGTAAAG 592
Query 593 AATATGAACTGTTTGAATTCCGTCGGACAGAGGTTCCTCCATTGCTCCTTATTTTAGATCGCTGTGATGATGCC 666
|.||.|||||.|||||||||||.|||||||||||||||||..|.||.||.|||.|.||||||||.|||||.|||
Sbjct 593 AGTACGAACTCTTTGAATTCCGGCGGACAGAGGTTCCTCCGCTACTTCTCATTCTGGATCGCTGCGATGACGCC 666
Query 667 ATCACCCCATTGCTAAACCAGTGGACATATCAGGCCATGGTCCACGAACTACTAGGCATAAACAACAATCGGAT 740
||.|||||..||||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||.|||||
Sbjct 667 ATTACCCCGCTGCTCAACCAGTGGACATATCAGGCCATGGTCCATGAACTACTGGGCATAAACAACAACCGGAT 740
Query 741 TGATCTTTCCAGAGTGCCGGGAATCAGTAAAGACTTAAGAGAAGTGGTCCTATCTGCTGAAAATGATGAATTCT 814
||||||||||||||||||.||||||||.||||||||||||||.||||||||.||.|||||||||||||||||||
Sbjct 741 TGATCTTTCCAGAGTGCCAGGAATCAGCAAAGACTTAAGAGAGGTGGTCCTGTCCGCTGAAAATGATGAATTCT 814
Query 815 ATGCTAATAATATGTACCTGAACTTTGCTGAGATTGGTAGCAATATAAAGAATCTCATGGAAGATTTTCAGAAG 888
||||||||||.|||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||
Sbjct 815 ATGCTAATAACATGTACCTGAACTTTGCCGAGATTGGTAGCAATATAAAGAATCTCATGGAAGACTTCCAGAAG 888
Query 889 AAGAAACCAAAAGAACAGCAAAAACTAGAATCAATAGCAGACATGAAGGCGTTTGTTGAGAATTATCCACAGTT 962
||||.|||||||||.||||||||.||.|||||.|||||||||||||||||.||||||||.||||||||||||||
Sbjct 889 AAGAGACCAAAAGAGCAGCAAAAGCTGGAATCCATAGCAGACATGAAGGCCTTTGTTGAAAATTATCCACAGTT 962
Query 963 CAAGAAAATGTCTGGGACTGTTTCAAAGCATGTGACAGTGGTTGGAGAACTGTCTCGATTGGTCAGTGAACGGA 1036
|||.||.||||||||||||||.||||||||.|||||||||||.||.|||||||||||.|||||||||||.||||
Sbjct 963 CAAAAAGATGTCTGGGACTGTCTCAAAGCACGTGACAGTGGTCGGGGAACTGTCTCGGTTGGTCAGTGAGCGGA 1036
Query 1037 ATCTGCTGGAGGTTTCAGAGGTTGAGCAAGAACTGGCCTGTCAAAATGACCATTCTAGTGCTCTCCAGA-ATAT 1109
|||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||.|||| ||
Sbjct 1037 ATCTGCTGGAGGTTTCAGAAGTTGAGCAAGAACTGGCCTGTCAGAATGACCATTCTAGTGCTCTTCAGACAT-- 1108
Query 1110 AAAAAGGCTTCTGCAGAACCCCAAAGTGACAGAGTTTGATGCTGCCCGCCTGGTGATGCTTTATGCTTTACATT 1183
||
Sbjct 1109 ------GC------------------------------------------------------------------ 1110
Query 1184 ATGAGCGACACAGCAGCAATAGCCTGCCAGGACTAATGATGGACCTCAGGAATAAAGGTGTTTCTGAGAAGTAT 1257
Sbjct 1111 -------------------------------------------------------------------------- 1110
Query 1258 CGAAAGCTCGTGTCTGCAGTTGTTGAATATGGTGGTAAACGAGTCAGAGGAAGTGACCTCTTCAGCCCCAAAGA 1331
Sbjct 1111 -------------------------------------------------------------------------- 1110
Query 1332 TGCTGTGGCTATCACCAAACAATTCCTCAAAGGACTGAAGGGAGTAGAAAATGTATATACACAGCATCAACCTT 1405
Sbjct 1111 -------------------------------------------------------------------------- 1110
Query 1406 TCCTACATGAAACCCTGGATCATCTCATCAAAGGAAGGCTTAAGGAAAACCTATATCCTTATTTAGGCCCCAGC 1479
Sbjct 1111 -------------------------------------------------------------------------- 1110
Query 1480 ACACTCAGAGACAGACCTCAGGATATCATTGTGTTTGTAATTGGAGGAGCCACCTATGAAGAGGCTCTAACAGT 1553
Sbjct 1111 -------------------------------------------------------------------------- 1110
Query 1554 TTATAACCTGAACCGCACCACTCCTGGAGTGAGGATTGTCCTGGGAGGCACCACAGTGCACAACACGAAAAGTT 1627
Sbjct 1111 -------------------------------------------------------------------------- 1110
Query 1628 TCCTAGAGGAAGTTCTGGCTTCTGGACTGCACAGCCGAAGCAAGGAGAGCTCTCAAGTCACATCAAGGTCAGCG 1701
Sbjct 1111 -------------------------------------------------------------------------- 1110
Query 1702 AGCAGAAGA 1710
Sbjct 1111 --------- 1110
