Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02742
- Subject:
- NM_001109684.1
- Aligned Length:
- 1278
- Identities:
- 901
- Gaps:
- 300
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGGAAGACAATAAGCAGCTCGCGCTCCGCATCGATGGGGCGGTCCAGTCGGCCAGCCAGGAGGTGACCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGCGAGCCGAACTCACGGCCACCAACCGGAGACTGGCGGAATTGAGCGGCGGAGGCGGCGGCCCCGGCTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCGGGAGCTGCGACCAGCGCCTCGGCAGCAGCGGTGACGGTGGCTGACTCGGCAGTGGCGACCATGGAGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATCAGCACGGAGCTCAAGTGCTCCTGCGGGAGGAAGTGGTCCAGCTTCAAGAGGAAGTGCACCTTCTCCGGCA 296
Query 1 -ATGAAGGAGATGTTGGCGAAGGACCTGGAGGAGTCGCAGGGCGGCAAGTCCTCTGAGGTCCTCTCGGCCACCG 73
||||||||.|||.||||||||||||||||||||||.|||||||||||||.|||||||||||||||.|||||.|
Sbjct 297 GATGAAGGAAATGCTGGCGAAGGACCTGGAGGAGTCACAGGGCGGCAAGTGCTCTGAGGTCCTCTCAGCCACTG 370
Query 74 AGCTCAGGGTCCAGCTGGCCCAGAAGGAGCAGGAGCTAGCCAGAGCCAAAGAAGCCTTGCAGGCCATGAAAGCT 147
|||||.||||.|||||||..||||||||||||||.||.|||||||||||||||||||||||.||||||||||||
Sbjct 371 AGCTCCGGGTGCAGCTGGTACAGAAGGAGCAGGAACTGGCCAGAGCCAAAGAAGCCTTGCAAGCCATGAAAGCT 444
Query 148 GATCGGAAGCGCTTAAAGGGCGAGAAGACAGACCTGGTGAGCCAGATGCAGCAGCTGTATGCCACACTGGAGAG 221
||.||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.||||||||
Sbjct 445 GACCGGAAGCGCTTAAAGGGCGAGAAGACTGACCTGGTGAGCCAGATGCAGCAGCTGTACGCCACGCTGGAGAG 518
Query 222 CCGCGAGGAGCAGCTCCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGCGAGGATGCGGTCAAAG 295
|||||||||||||.|.|||||||||||||||||||||||||||||||||||||||||.||.||.||.|||||||
Sbjct 519 CCGCGAGGAGCAGTTGCGAGACTTCATCCGCAACTATGAGCAGCACCGCAAGGAGAGTGAAGACGCAGTCAAAG 592
Query 296 CGCTGGCCAAGGAGAAGGACCTGCTGGAGCGTGAGAAGTGGGAGCTGCGGCGCCAAGCCAAGGAGGCCACAGAC 369
|.|||||||||||||||||||||||||||||.||||||||||||||.||.||.||.||||||||.|||||||||
Sbjct 593 CACTGGCCAAGGAGAAGGACCTGCTGGAGCGAGAGAAGTGGGAGCTTCGACGGCAGGCCAAGGAAGCCACAGAC 666
Query 370 CACGCCACGGCACTGCGCTCCCAGCTGGACCTCAAGGACAACCGGATGAAGGAGCTGGAGGCCGAGCTGGCCAT 443
||.||..||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||.|||||
Sbjct 667 CATGCTGCGGCCCTGCGCTCCCAGCTGGACCTCAAGGACAACCGCATGAAGGAGCTGGAGGCGGAGCTCGCCAT 740
Query 444 GGCCAAACAGTCCTTAGCTACGCTGACCAAGGACGTCCCCAAGCGGCATTCCCTCGCCATGCCGGGCGAGACGG 517
||||||.|||||||||||.||.|||||||||||.|||||||||.|||||||||||||||||||.||.|||||||
Sbjct 741 GGCCAAGCAGTCCTTAGCCACTCTGACCAAGGATGTCCCCAAGAGGCATTCCCTCGCCATGCCCGGTGAGACGG 814
Query 518 TGCTCAATGGCAACCAGGAGTGGGTGGTGCAGGCGGACCTCCCGCTGACCGCAGCCATCCGGCAGAGTCAACAG 591
|||||||||||||||||||.||||||||||||||.||||||||.|||||.||.|||||||||||.||.||||||
Sbjct 815 TGCTCAATGGCAACCAGGAATGGGTGGTGCAGGCTGACCTCCCACTGACTGCTGCCATCCGGCAAAGCCAACAG 888
Query 592 ACTCTCTACCACTCACACCCCCCTCACCCTGCGGACCGGCAAGCGGTCAGGGTGAGCCCCTGCCACTCCCGGCA 665
||||||||||||||||||||.||.||||||||.||||||||| |||||||||||||||||||||||..|.||
Sbjct 889 ACTCTCTACCACTCACACCCTCCCCACCCTGCAGACCGGCAA---GTCAGGGTGAGCCCCTGCCACTCAAGACA 959
Query 666 GCCCTCTGTCATCTCCGACGCATCTGCCGCCGAAGGCGACCGGTCGTCCACACCGAGCGACATCAACTCCCCTC 739
||||||.||||||||.||.||.|||||.||.|||||.||||||||.||.|||||.|||||||||||||||||..
Sbjct 960 GCCCTCCGTCATCTCTGATGCTTCTGCTGCTGAAGGTGACCGGTCATCTACACCAAGCGACATCAACTCCCCAA 1033
Query 740 GACACCGGACACACTCCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAACCTGCACAACCCTATTGTA 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||||
Sbjct 1034 GACACCGGACACACTCCCTCTGCAACGGCGACAGTCCCGGCCCAGTTCAGAAGAGCCTACACAACCCTATTGTA 1107
Query 814 CAGTCACTAGAGGATCTTGAAGACCAAAAACGGAAAAAGAAGAAAGAGAAGATGGGATTCGGCTCCATCTCCCG 887
||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct 1108 CAGTCACTAGAGGATCTTGAAGACCAAAAACGGAAAAAGAAGAAGGAGAAGATGGGATTCGGCTCCATCTCTCG 1181
Query 888 CGTCTTCGCCAGAGGGAAGCAGCGGAAGTCCCTCGACCCCGGCCTCTTTGATGGTACCGCCCCTGATTATTACA 961
.||||||||||||||||||||.|||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1182 AGTCTTCGCCAGAGGGAAGCAACGGAAGTCCCTCGACCCGGGCCTCTTTGATGGTACCGCCCCTGATTATTACA 1255
Query 962 TAGAGGAGGACGCGGACTGG 981
|||||||.||||||||||||
Sbjct 1256 TAGAGGAAGACGCGGACTGG 1275