Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02790
Subject:
NM_001286418.1
Aligned Length:
1141
Identities:
796
Gaps:
293

Alignment

Query    1  ATGGAGAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTT  74
            |||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct    1  ATGGAGAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTT  74

Query   75  TACTACCATCCCATTTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACT  148
            ||||||||||||.||.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||
Sbjct   75  TACTACCATCCCGTTCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACT  148

Query  149  ATGCCGGCCAGACCGGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAA  221
            ||||||||||||||.||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||
Sbjct  149  ATGCCGGCCAGACCAGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAA  221

Query  222  CTCACCCAGCACACAAAATGGATCTCTTACGACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACAC  295
            .||||||||||..||.|||||||||||.||                                            
Sbjct  222  TTCACCCAGCAACCAGAATGGATCTCTCAC--------------------------------------------  251

Query  296  AAAGTAGTGAAAATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGG  369
                                                                                      
Sbjct  252  --------------------------------------------------------------------------  251

Query  370  GACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGAAATAATCTTTAATGAACGTGG  443
                                                                                      
Sbjct  252  --------------------------------------------------------------------------  251

Query  444  CTCTAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTACACGGCA  517
                                                                                      
Sbjct  252  --------------------------------------------------------------------------  251

Query  518  CCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCACA  591
                                     ||||||||||||.||||||||.||.||||||||.||||||||||||||.
Sbjct  252  -------------------------GGTGAATAATGCAACAGCACGGGTCATGACCAACAAGAAGATGGTCACG  300

Query  592  CCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCAG  665
            ||||||||||||||.|||||.|||||||||||||||||||||||.||||||||.||||||||||||||||||||
Sbjct  301  CCATATGCAAATGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCTGAGTTATATGCAGCATCCAG  374

Query  666  CTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTACA  739
            |||||||||.||||||||||||||||||||.||.||.||||||.|.|||||||||||.||.|||||||||||||
Sbjct  375  CTTTCAAGCTGATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAGAGGAGGCATCAACACTTACA  448

Query  740  TTCCTTTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGA  813
            |.|||.|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||.||
Sbjct  449  TCCCTCTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAACTGCAGCCACCACGGCAGCTGCTTTCCGA  522

Query  814  GGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGC  887
            |||||||||.||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  523  GGAGCCCATCTGAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGC  596

Query  888  CTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATGGTGGATATGCAGCCTACAGATATG  961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  597  CTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATGGTGGATATGCAGCCTACAGATATG  670

Query  962  CACAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGACGGTTATGGCAGG  1035
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||.||||||
Sbjct  671  CACAGCCTGCTACTGCAACCGCAGCCACAGCTGCTGCAGCCGCTGCAGCCGCTTACAGCGACGGTTACGGCAGG  744

Query 1036  GTGTACACAGCCGACCCCTACCATGCCCTTGCCCCTGCCGCTAGCTATGGAGTTGGCGCTGTGGCGAGTTTATA  1109
            |||||||||||.|||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||.||
Sbjct  745  GTGTACACAGCTGACCCCTACCATGCCCTCGCCCCTGCCGCCAGCTATGGAGTTGGCGCTGTGGCGAGTTTGTA  818

Query 1110  CCGAGGTGGCTACAGCCGATTTGCCCCCTAC  1140
            |||||||||||||||||||||||||||||||
Sbjct  819  CCGAGGTGGCTACAGCCGATTTGCCCCCTAC  849

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