Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02790
- Subject:
- XM_006521564.3
- Aligned Length:
- 1499
- Identities:
- 1001
- Gaps:
- 394
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC 148
Query 1 ---------------------------------------------------------ATGGAGAAAAAGAAA-- 15
|||||.....||.||
Sbjct 149 GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG 222
Query 16 -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT 88
|||| .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 223 GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT 292
Query 89 TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC 162
|.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct 293 TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC 366
Query 163 GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC 235
.||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct 367 AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC 439
Query 236 AAAATGGATCTCTTAC---GACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAA 306
|.|||||||||||.|| |||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct 440 AGAATGGATCTCTCACGCAGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAA 513
Query 307 AATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCT 380
||||||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct 514 AATTCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCT 587
Query 381 CCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGAAATAATCTTTAATGAACGTGGCTCTAAGGGAT 454
|||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||.|||||||
Sbjct 588 CCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGAT 661
Query 455 TCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAG 528
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 662 TCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAG 735
Query 529 GGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAA 602
||||||||||||||||||||||||||.||||||||.||.||||||||.||||||||||||||.|||||||||||
Sbjct 736 GGCCGTAAAATCGAGGTGAATAATGCAACAGCACGGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAA 809
Query 603 TGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAG 676
|||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|
Sbjct 810 TGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTG 883
Query 677 ATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATC 750
|||||||||||||||||||.||.||.||||||.|.|||||||||||.||.||||||||||||||.|||.|||||
Sbjct 884 ATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATC 957
Query 751 AGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTT 824
||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||.|||||||||||.|
Sbjct 958 AGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAACTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCT 1031
Query 825 GAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTG 898
|||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 GAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTG 1105
Query 899 TGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTAT---GGTG--GATATG---------CAGCCTA----- 953
|||||||||||||||||||||||||||||||||||||| |.|| ||.||| ||..|||
Sbjct 1106 TGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCT 1179
Query 954 -------------------------CAGATATGCACAGCCT--GCTACTGC--------------AACCGCA-- 984
|.||||| .|||| .| |.|||||| || ||
Sbjct 1180 CTCAGTGGAGTCTCTGTTCCCTTCTCTGATAT-AACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATT 1248
Query 985 ---------GCCACCGCTGCTGCAGCCGCTGCAGCCGC-----TTAC------------------AGTGAC--- 1023
||||..||| |.|.|| .|| |||| ||.|||
Sbjct 1249 GTGGTATGGGCCAGGGCT-------CGGGTG----GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAG 1311
Query 1024 -GGTTATGGCAGGG--TGT--ACACA---GCCGAC---------CC---CTACCATGCCCTTGCCCCTGC-CGC 1076
.||||.||.|.|| ||| ||.|| |..||| || .|||||.|.|.|||...|||| |||
Sbjct 1312 TTGTTAGGGTATGGAATGTTAACTCAAGTGGTGACTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGC 1385
Query 1077 TAGCTATGGAGTTGGCGCTGTGGCGAGTTTA---TACCGAG---GTGGCTACAG-----------CCGATTTGC 1133
| ||| |.|.|||..|||||| || .|||||| |||| ||.|| |||.|.|
Sbjct 1386 T--CTA-GTAATTGAGGCTGTG-------TACTTCACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT-- 1446
Query 1134 CCCCTAC------------ 1140
|||.|.
Sbjct 1447 -CCCAAGAGAATGCTGGGA 1464