Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_02790
• Subject: XM_006521567.3
• Aligned Length: 1465
• Identities: 991
• Gaps: 377

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  --------------------------ATGGAGAAAAAGAAAATGGTAACTCAGGGTAACCAGGAGCCGACAACA  48
                                      |||                     |||||||||||||||||.||||||
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATG---------------------CAGGGTAACCAGGAGCCAACAACA  201

Query   49  ACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCATTTCCACCACCTCCGCAGAATGGAATTCCCACAGA  122
            ||||||||||||||||||||||||||||||||||||||.||.|||||||||||.||.|||||||||||||||||
Sbjct  202  ACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGTTCCCACCACCTCCACAAAATGGAATTCCCACAGA  275

Query  123  GTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACCGGTGAGCATAACCTGACACTCTACGGAAGTACGC  196
            .|||||.||||||||||||||.||||||||||||||||||.||||.|||||||||||.||||||||.|||||||
Sbjct  276  ATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACCAGTGAACATAACCTGACCCTCTACGGGAGTACGC  349

Query  197  AAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACACAAAATGGATCTCTTAC---GACAGAAGGTGGAGC  266
             |||| ||.||.||.|||||.|||||.||||||||||..||.|||||||||||.||   |||||||||||||||
Sbjct  350  -AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACCAGAATGGATCTCTCACGCAGACAGAAGGTGGAGC  422

Query  267  ACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAAAATTCAGAGAGTAAATCTACCCCGAAACGGCTGC  340
            ||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||.||.||.||.||.|
Sbjct  423  ACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAAAATTCAGAGAGTAAATCTACGCCCAAGCGACTAC  496

Query  341  ATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTA  414
            ||||||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  497  ATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCTCCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTA  570

Query  415  GATGTAGAAATAATCTTTAATGAACGTGGCTCTAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGC  488
            |||||.|||||||||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct  571  GATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGGATTCGGGTTCGTAACTTTCGAGAATAGTGCTGATGC  644

Query  489  AGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCAC  562
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  645  AGACAGGGCCAGGGAGAAATTGCACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCAACAGCAC  718

Query  563  GTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTA  636
            |.||.||||||||.||||||||||||||.||||||||||||||.|||||.|||||||||||||||||||||||.
Sbjct  719  GGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAATGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTG  792

Query  637  TATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCT  710
            ||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||.||.||.||||||.|
Sbjct  793  TATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTGATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTT  866

Query  711  ATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCTA  784
            .|||||||||||.||.||||||||||||||.|||.|||||||||||||||||||||||||||||||||||||.|
Sbjct  867  GTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAA  940

Query  785  CTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTC  858
            |||||||||||||||||||.||||||.|||||||||||.||||||||||||||||||||||.||||||||||||
Sbjct  941  CTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCTGAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTC  1014

Query  859  CGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCT  932
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015  CGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCT  1088

Query  933  CTAT---GGTG--GATATG---------CAGCCTA------------------------------CAGATATGC  962
            ||||   |.||  ||.|||         ||..|||                              |.||||| .
Sbjct 1089  CTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCTCTCAGTGGAGTCTCTGTTCCCTTCTCTGATAT-A  1161

Query  963  ACAGCCT--GCTACTGC--------------AACCGCA-----------GCCACCGCTGCTGCAGCCGCTGCAG  1009
            |||| .|  |.||||||              ||   ||           ||||..|||       |.|.||   
Sbjct 1162  ACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATTGTGGTATGGGCCAGGGCT-------CGGGTG---  1221

Query 1010  CCGC-----TTAC------------------AGTGAC----GGTTATGGCAGGG--TGT--ACACA---GCCGA  1049
             .||     ||||                  ||.|||    .||||.||.|.||  |||  ||.||   |..||
Sbjct 1222  -GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAGTTGTTAGGGTATGGAATGTTAACTCAAGTGGTGA  1294

Query 1050  C---------CC---CTACCATGCCCTTGCCCCTGC-CGCTAGCTATGGAGTTGGCGCTGTGGCGAGTTTA---  1107
            |         ||   .|||||.|.|.|||...|||| ||||  ||| |.|.|||..||||||       ||   
Sbjct 1295  CTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGCT--CTA-GTAATTGAGGCTGTG-------TACTT  1358

Query 1108  TACCGAG---GTGGCTACAG-----------CCGATTTGCCCCCTAC------------  1140
            .||||||   |||| ||.||           |||.|.|   |||.|.            
Sbjct 1359  CACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT---CCCAAGAGAATGCTGGGA  1413