Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_02790
• Subject: XM_006521571.3
• Aligned Length: 1499
• Identities: 909
• Gaps: 487

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  ---------------------------------------------------------ATGGAGAAAAAGAAA--  15
                                                                     |||||.....||.||  
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG  222

Query   16  -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT  88
             ||||    .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  223  GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT  292

Query   89  TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC  162
            |.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct  293  TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC  366

Query  163  GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC  235
            .||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct  367  AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC  439

Query  236  AAAATGGATCTCTTAC---GACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAA  306
            |.|||||||||||.||   |||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct  440  AGAATGGATCTCTCACGCAGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAA  513

Query  307  AATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCT  380
            ||||||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  514  AATTCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCT  587

Query  381  CCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGAAATAATCTTTAATGAACGTGGCTCTAAGGGAT  454
            |||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||        
Sbjct  588  CCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTGGAAATAATCTTTAATGAGCGCGGCTC--------  653

Query  455  TCGGGTTCGTAACTTTCGAGAATAGTGCTGATGCAGACAGGGCCAGGGAGAAATTACACGGCACCGTGGTAGAG  528
                                                                                      
Sbjct  654  --------------------------------------------------------------------------  653

Query  529  GGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCACACCATATGCAAA  602
                       |.|||||||||||||.||||||||.||.||||||||.||||||||||||||.|||||||||||
Sbjct  654  -----------CAAGGTGAATAATGCAACAGCACGGGTCATGACCAACAAGAAGATGGTCACGCCATATGCAAA  716

Query  603  TGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCAGCTTTCAAGCAG  676
            |||.|||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||||||||.|
Sbjct  717  TGGCTGGAAGTTAAGCCCAGTAGTTGGAGCTGTGTATGGTCCTGAGTTATATGCAGCATCCAGCTTTCAAGCTG  790

Query  677  ATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTACATTCCTTTAATC  750
            |||||||||||||||||||.||.||.||||||.|.|||||||||||.||.||||||||||||||.|||.|||||
Sbjct  791  ATGTGTCCCTAGGCAATGAGGCGGCTGTGCCCTTGTCAGGAAGAGGAGGCATCAACACTTACATCCCTCTAATC  864

Query  751  AGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAGAGGAGCCCATTT  824
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||||.|||||||||||.|
Sbjct  865  AGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCAACTGCAGCCACCACGGCAGCTGCTTTCCGAGGAGCCCATCT  938

Query  825  GAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTG  898
            |||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  939  GAGGGGCAGAGGGCGGACAGTGTATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCGCCTATCCAGGTG  1012

Query  899  TGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTAT---GGTG--GATATG---------CAGCCTA-----  953
            ||||||||||||||||||||||||||||||||||||||   |.||  ||.|||         ||..|||     
Sbjct 1013  TGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATTCAGCTGAAGAAATGTTAACATCTCACTCTAAATCT  1086

Query  954  -------------------------CAGATATGCACAGCCT--GCTACTGC--------------AACCGCA--  984
                                     |.||||| .|||| .|  |.||||||              ||   ||  
Sbjct 1087  CTCAGTGGAGTCTCTGTTCCCTTCTCTGATAT-AACAG-ATGGGTTACTGCTTGTTATAATTATTAA---CATT  1155

Query  985  ---------GCCACCGCTGCTGCAGCCGCTGCAGCCGC-----TTAC------------------AGTGAC---  1023
                     ||||..|||       |.|.||    .||     ||||                  ||.|||   
Sbjct 1156  GTGGTATGGGCCAGGGCT-------CGGGTG----GGCAAGATTTACTCCTCCTTTGGGCTGGGGAGGGACCAG  1218

Query 1024  -GGTTATGGCAGGG--TGT--ACACA---GCCGAC---------CC---CTACCATGCCCTTGCCCCTGC-CGC  1076
             .||||.||.|.||  |||  ||.||   |..|||         ||   .|||||.|.|.|||...|||| |||
Sbjct 1219  TTGTTAGGGTATGGAATGTTAACTCAAGTGGTGACTGACTGTTTCCGTAATACCAGGTCGTTGTGGCTGCACGC  1292

Query 1077  TAGCTATGGAGTTGGCGCTGTGGCGAGTTTA---TACCGAG---GTGGCTACAG-----------CCGATTTGC  1133
            |  ||| |.|.|||..||||||       ||   .||||||   |||| ||.||           |||.|.|  
Sbjct 1293  T--CTA-GTAATTGAGGCTGTG-------TACTTCACCGAGCTTGTGG-TAGAGCCTAGGGCAAACCGCTGT--  1353

Query 1134  CCCCTAC------------  1140
             |||.|.            
Sbjct 1354  -CCCAAGAGAATGCTGGGA  1371