Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02790
Subject:
XM_006521596.3
Aligned Length:
1364
Identities:
428
Gaps:
886

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCGGAAGGCGGCCAGGCGCAGCAGCAGCCGCCTCAGCTCGGGCCCGGCGCTGCCGCCCGGGGCATGAAGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGTCGGAGGTGGAGTTGCCGGTGCCCGGAGCGGGGGCAGACGGACCCGAGCCCGGCCTGAGCAAGCGGCCAC  148

Query    1  ---------------------------------------------------------ATGGAGAAAAAGAAA--  15
                                                                     |||||.....||.||  
Sbjct  149  GCACAGAGGAGGCGGCCGACGGCGGGATGCAGAACGAGCCACTGACCCCGGGTTATCATGGATTCCCAGCAAGG  222

Query   16  -ATGGTAACTCAGGGTAACCAGGAGCCGACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCAT  88
             ||||    .|||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  223  GATGG----CCAGGGTAACCAGGAGCCAACAACAACTCCTGACGCAATGGTTCAGCCTTTTACTACCATCCCGT  292

Query   89  TTCCACCACCTCCGCAGAATGGAATTCCCACAGAGTATGGGGTGCCACACACTCAAGACTATGCCGGCCAGACC  162
            |.|||||||||||.||.|||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||
Sbjct  293  TCCCACCACCTCCACAAAATGGAATTCCCACAGAATATGGAGTGCCACACACTCAGGACTATGCCGGCCAGACC  366

Query  163  GGTGAGCATAACCTGACACTCTACGGAAGTACGCAAGCC-CACGGGGAGCAGAGCAGCAACTCACCCAGCACAC  235
            .||||.|||||||||||.||||||||.||||||| |||| ||.||.||.|||||.|||||.||||||||||..|
Sbjct  367  AGTGAACATAACCTGACCCTCTACGGGAGTACGC-AGCCTCATGGAGAACAGAGTAGCAATTCACCCAGCAACC  439

Query  236  AAAATGGATCTCTTAC---GACAGAAGGTGGAGCACAGACAGACGGCCAGCAGTCACAGACACAAAGTAGTGAA  306
            |.|||||||||||.||   |||||||||||||||||||||||||||.||.||||||||||||||||||||||||
Sbjct  440  AGAATGGATCTCTCACGCAGACAGAAGGTGGAGCACAGACAGACGGACAACAGTCACAGACACAAAGTAGTGAA  513

Query  307  AATTCAGAGAGTAAATCTACCCCGAAACGGCTGCATGTCTCTAATATTCCTTTCCGCTTCCGGGACCCTGACCT  380
            ||||||||||||||||||||.||.||.||.||.|||||||||||||||||.|||||||||||.|||||||||||
Sbjct  514  AATTCAGAGAGTAAATCTACGCCCAAGCGACTACATGTCTCTAATATTCCCTTCCGCTTCCGAGACCCTGACCT  587

Query  381  CCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTAGAAATAATCTTTAATGAACGTGGCTCTAAGG-GA  453
            |||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||.|||| ||
Sbjct  588  CCGGCAGATGTTTGGGCAGTTTGGCAAAATCCTAGATGTGGAAATAATCTTTAATGAGCGCGGCTCCAAGGAGA  661

Query  454  ----------TTCGGGTTCGTAACTTTCGAGAATAGTGCT-GATGCAGACAGGGCCAGGGAGAAATTACACGGC  516
                      ||.|..||| |..||||     |.|||  | .|||||..                         
Sbjct  662  TCCATCTGCTTTTGATTTC-TCCCTTT-----AAAGT--TACATGCATT-------------------------  702

Query  517  ACCGTGGTAGAGGGCCGTAAAATCGAGGTGAATAATGCTACAGCACGTGTAATGACCAATAAGAAGATGGTCAC  590
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  591  ACCATATGCAAATGGTTGGAAATTAAGCCCAGTAGTTGGAGCTGTATATGGTCCGGAGTTATATGCAGCATCCA  664
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  665  GCTTTCAAGCAGATGTGTCCCTAGGCAATGATGCAGCAGTGCCCCTATCAGGAAGAGGGGGTATCAACACTTAC  738
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  739  ATTCCTTTAATCAGTCTCCCTTTAGTTCCTGGCTTCCCTTACCCTACTGCAGCCACCACGGCAGCCGCTTTCAG  812
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  813  AGGAGCCCATTTGAGGGGCAGAGGGCGGACAGTATATGGTGCAGTCCGAGCGGTACCTCCAACAGCCATCCCCG  886
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  887  CCTATCCAGGTGTGGTTTACCAGGACGGATTTTACGGTGCTGACCTCTATGGTGGATATGCAGCCTACAGATAT  960
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query  961  GCACAGCCTGCTACTGCAACCGCAGCCACCGCTGCTGCAGCCGCTGCAGCCGCTTACAGTGACGGTTATGGCAG  1034
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query 1035  GGTGTACACAGCCGACCCCTACCATGCCCTTGCCCCTGCCGCTAGCTATGGAGTTGGCGCTGTGGCGAGTTTAT  1108
                                                                                      
Sbjct  703  --------------------------------------------------------------------------  702

Query 1109  ACCGAGGTGGCTACAGCCGATTTGCCCCCTAC  1140
                                            
Sbjct  703  --------------------------------  702