Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_02865
• Subject: XM_011243027.1
• Aligned Length: 1288
• Identities: 823
• Gaps: 353

Alignment

Query    1  ATGGTTTTCTCAAACAATGATGAAGGCCTTATTAACAAAAAGTTACCCAAAGAACTTCTGTTAAGAATATTTTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTTCTTGGATATAGTAACTTTGTGCCGATGTGCACAGATTTCCAAGGCTTGGAACATCTTAGCCCTGGATGGAA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCAACTGGCAAAGAATAGATCTTTTTAACTTTCAAACAGATGTAGAGGGTCGAGTGGTGGAAAATATCTCGAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CGATGCGGTGGATTCCTGAGGAAGCTCAGCTTGCGAGGCTGCATTGGTGTTGGGGATTCCTCCTTGAAGACCTT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGCACAGAACTGCCGAAACATTGAACATTTGAACCTCAATGGATGCACAAAAATCACTGA--------------  356
                                                  ||||.|||||.|||||||||||              
Sbjct    1  --------------------------------------ATGGCTGCACGAAAATCACTGACAGTATGTCTGCCT  36

Query  357  -----CAGCACGTGTTATAGCCTTAGCAGATTCTGTTCCAAGCTGAAACATCTGGATCTGACCTCCTGTGTGTC  425
                 ||||||||||||.||||||||||||||||||||||||||||||||.||||||||.||.|||||.|||||
Sbjct   37  CGTTTCAGCACGTGTTACAGCCTTAGCAGATTCTGTTCCAAGCTGAAACACCTGGATCTCACGTCCTGCGTGTC  110

Query  426  TATTACAAACAGCTCCTTGAAGGGGATCAGTGAGGGCTGCCGAAACCTGGAGTACCTGAACCTCTCTTGGTGTG  499
            |.||||.||||||||.||.|||||.|||||.|||||||||||.||||||||.||.|||||||||||.|||||||
Sbjct  111  TGTTACCAACAGCTCTTTAAAGGGCATCAGCGAGGGCTGCCGGAACCTGGAATATCTGAACCTCTCCTGGTGTG  184

Query  500  ATCAGATCACGAAGGATGGCATCGAGGCACTGGTGCGAGGTTGTCGAGGCCTGAAAGCCCTGCTCCTGAGGGGC  573
            |.||||||||.|||||.|||||.|||||.||||||||.||.||.||.||..||||||||||||||||||||||.
Sbjct  185  ACCAGATCACAAAGGAAGGCATTGAGGCGCTGGTGCGGGGGTGCCGGGGTTTGAAAGCCCTGCTCCTGAGGGGT  258

Query  574  TGCACACAGTTAGAAGATGAAGCTCTGAAACACATTCAGAATTACTGCCATGAGCTTGTGAGCCTCAACTTGCA  647
            ||.|||||||||||.||.|||||||||||||||||||||||..|||||||.|||||.||||||||||||.||||
Sbjct  259  TGTACACAGTTAGAGGACGAAGCTCTGAAACACATTCAGAACCACTGCCACGAGCTGGTGAGCCTCAACCTGCA  332

Query  648  GTCCTGCTCACGTATCACGGATGAAGGTGTGGTGCAGATATGCAGGGGCTGTCACCGGCTACAGGCTCTCTGCC  721
            ||||||||||||.|||||.|||||.||.|||||||||||.|||||||||||.|||||||||||||||||.||||
Sbjct  333  GTCCTGCTCACGCATCACTGATGATGGCGTGGTGCAGATCTGCAGGGGCTGCCACCGGCTACAGGCTCTGTGCC  406

Query  722  TTTCGGGTTGCAGCAACCTCACAGATGCCTCTCTTACAGCCCTGGGTTTGAACTGTCCGCGACTGCAAATTTTG  795
            |.||||||||.||||||||.||.|||||.|||||.||||||.||||..|||||||.||..||||.|||.|||||
Sbjct  407  TCTCGGGTTGTAGCAACCTTACGGATGCATCTCTCACAGCCTTGGGCCTGAACTGCCCCAGACTACAAGTTTTG  480

Query  796  GAGGCTGCCCGATGCTCCCATTTGACTGACGCAGGTTTTACACTTTTAGCTCGGAATTGCCACGAATTGGAGAA  869
            |||||||||||.|||||||||.||||.||||||||.||||||||..||||||||||||||||.||..|||||||
Sbjct  481  GAGGCTGCCCGGTGCTCCCATCTGACCGACGCAGGCTTTACACTGCTAGCTCGGAATTGCCATGAGCTGGAGAA  554

Query  870  GATGGATCTTGAAGAATGCATCCTGATAACCGACAGCACACTCATCCAGCTCTCCATTCACTGTCCTAAACTGC  943
            ||||||.|||||||||||..|||||||.|||||||||||.|||.|||||||||||||.||||||||.||.||||
Sbjct  555  GATGGACCTTGAAGAATGTGTCCTGATTACCGACAGCACCCTCGTCCAGCTCTCCATCCACTGTCCCAAGCTGC  628

Query  944  AAGCCCTGAGCCTGTCCCACTGTGAACTCATCACAGATGATGGGATCCTGCACCTGAGCAACAGTACCTGTGGC  1017
            |||||||||||.|||||||||||||.||||||||||||||.|||||||||||||||||||.|||.||||||||.
Sbjct  629  AAGCCCTGAGCTTGTCCCACTGTGAGCTCATCACAGATGAGGGGATCCTGCACCTGAGCAGCAGCACCTGTGGG  702

Query 1018  CATGAGAGGCTGCGGGTACTGGAGTTGGACAACTGCCTCCTCATCACTGATGTGGCCCTGGAACACCTAGAGAA  1091
            ||.|||||.||.|||||.||||||.|||||||||||||.||..||||.||.|...|.|||||.|||||.|||||
Sbjct  703  CACGAGAGACTCCGGGTGCTGGAGCTGGACAACTGCCTTCTTGTCACGGACGCCTCGCTGGAGCACCTGGAGAA  776

Query 1092  CTGCCGAGGCCTGGAGCGCCTCGAGCTGTACGACTGCCAGCAGGTTACCCGTGCAGGCATCAAGCGGATGCGGG  1165
            ||||||||||||||||||.||.|||||.|||||||||||||||||.||||||||||||||||||||.|||||||
Sbjct  777  CTGCCGAGGCCTGGAGCGACTGGAGCTTTACGACTGCCAGCAGGTCACCCGTGCAGGCATCAAGCGCATGCGGG  850

Query 1166  CTCAGCTCCCTCATGTCAAAGTCCACGCCTACTTTGCTCCCGTCACCCCACCGACAGCAGTGGCAGGAAGTGGA  1239
            |||||||.|||||||||||||||||.||||||||||||||.||||||||.||..||||||||||||||||||||
Sbjct  851  CTCAGCTTCCTCATGTCAAAGTCCATGCCTACTTTGCTCCAGTCACCCCTCCACCAGCAGTGGCAGGAAGTGGA  924

Query 1240  CAGCGACTGTGCAGGTGCTGTGTCATTCTC  1269
            ||.|||||||||||.|||||||||||.|||
Sbjct  925  CATCGACTGTGCAGATGCTGTGTCATACTC  954