Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02941
- Subject:
- NR_132359.1
- Aligned Length:
- 3750
- Identities:
- 281
- Gaps:
- 3452
Alignment
Query 1 ATGAGTGTCCCTGGGCCGTCGTCTCCGGACGGGGCCCTGACACGGCCACCCTACTGCCTGGAGGCCGGGGAGCC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GACGC---CTG-GTTTAAGTGACACTT--CTCCAGATGAAGGGT---TAATAGAGGACTTGACTATA-GAAGAC 138
||| |||||.||| || |||| ||| |.||.|...|.|||.| ||| |
Sbjct 1 -----ATTCTGAGTTTATGTG----TTGACTCC--------GGTACGTCATTGGTTATTTGTC-ATACG----- 51
Query 139 AAAGCAGTGGAGCAACTGGCAGAAGGATTGCTTTCTCATTATTTGCCAGATCTGCAGA-GATCAAAACAAGCCC 211
||||||| |||..||.|| ||||.||||| .||| |||| |||
Sbjct 52 ---GCAGTGG------TGGGGGATGG--------------ATTTACCAGA----AAGATGATC------AGC-- 90
Query 212 TCCAGGAACTCACACAGAACCAAGTTGTATTGTTAGACACACTGGAACAAGAGATTTCAAAATTTAAAGAATGT 285
|.|.||||.|.|||
Sbjct 91 --------------------------------------------------------TTATAATTCAGAGA---- 104
Query 286 CATTCTATGTTGGATATTAATGCTTTGTTTGCTGAGGCTAAACACTATCATGCCAAGTTGGTGAATATAAGAAA 359
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 105 --------------------------GTTTGCTGAGGCTAAACACTATCATGCCAAGTTGGTGAATATAAGAAA 152
Query 360 AGAGATGCTGATGCTTCATGAAAAAACATCAAAGTTAAAAAAAAGAGCACTTAAACTGCAGCAGAAGAGGCAAA 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 153 AGAGATGCTGATGCTTCATGAAAAAACATCAAAGTTAAAAAAAAGAGCACTTAAACTGCAGCAGAAGAGGCAAA 226
Query 434 AAGAAGAGTTGGAAAGGGAGCAGCAACGAGAGAAGGAGTTTGAAAGAGAAAAGCAGTTAACTGCCAGACCAGCC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 227 AAGAAGAGTTGGAAAGGGAGCAGCAACGAGAGAAGGAGTTTGAAAGAGAAAAGCAGTTAACTGCCAGACCAGCC 300
Query 508 AAAAGGATG----------------------------------------------------------------- 516
|||||||||
Sbjct 301 AAAAGGATGTGAAAAGTTGTGTTTGTGTGTTTTCTTCTCCTGTCCCATATTTGGGTTATGATGACTCAAGTGTA 374
Query 517 -------------------------------------------------------------------------- 516
Sbjct 375 GACTGAAGTTGAGGTAGTGCCTTATGCCATTATGTCATATGTTGAAATCCTTATTCCGGTATTACTGTGTCTCC 448
Query 517 -------------------------------------------------------------------------- 516
Sbjct 449 ATGCCTTTTTTCCAAGTAGCAGACGTCATGTTGCATGGTTTTTGATATTTATATGTAAGTTTTTCAAATTTTGC 522
Query 517 -------------------------------------------------------------------------- 516
Sbjct 523 TTAATTTTAAAATTTATTATTTTGATCTTGAATTATTTATAAACTGGAAAGTGGTTTGATTATTGTGAGTCAAA 596
Query 517 -------------------------------------------------------------------------- 516
Sbjct 597 ACTCTAAGTGGTTAAAAATTAGTATGAATTTTTTAGCTTCTTAATGAATATGGATTTAAAACTCTCCAGTTCTT 670
Query 517 -------------------------------------------------------------------------- 516
Sbjct 671 ATTTTATGAAATGACTTGCCTTTCTGGTAATACAATGCTGATTTTTTAGTAATTGCCTTTTCATTACTTTGTTA 744
Query 517 -------------------------------------------------------------------------- 516
Sbjct 745 AGAAGAAATGCCAGCTGTTTAATCACACCTACCCCTGGAAAAGAGGTAAACCTTTTGAACAGTTGAATTTCATC 818
Query 517 -------------------------------------------------------------------------- 516
Sbjct 819 AGAAGCTCTATAGCTTTTTGGTGAGAGGAAGTGATACTCTTTATTACAAGAAACAAGGAATTAACAAAAATAAG 892
Query 517 -------------------------------------------------------------------------- 516
Sbjct 893 GAACTTGTTGCTACCTTTCTTTTCTGTTGAACATTAAAAATAATTTGGTTTGTGGACTGGGCATGGTGGCTTAT 966
Query 517 -------------------------------------------------------------------------- 516
Sbjct 967 GGAAAAGAGGTGAGCCTTTGTGAAGAACATAATGGAAAAGTGCATGTACGGGAAATAACAGCACTTTAGGTGTA 1040
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1041 GTTCAGGTGAGCAAGATGCCAGATAGTTTCTACTAACCATATACTCTTTCTGCTTCTTAGCGTCGTTGTCACTG 1114
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1115 CTTCTGTGGCTTTTGGGTTCAAAGTAGATTATATATATTCCTAAAGCTTGGTGGAGGTAGTGGAGCTATCACAC 1188
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1189 ACTCAAATGAGCTTGTATATTTATAATACAATATAGTATTATAGTAACAGTTATCATACACTGAGATATAGTTT 1262
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1263 CTGTGCTTGTAAAAAATTCTTGAAGTGAGGCCGGGTGCGGTGGCTCATGCCTGTAATCCCAACGCTTTGGGACG 1336
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1337 CCGAGGCGGGTGGATCATGAGGTCAAAAGATTGAGACCATCCTGGCCAACATGGTGAAACCCCGTCTCTACTAG 1410
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1411 AAATACAAAAATTAGCTGGGTGTGGGGGCGTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAAT 1484
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1485 TGCTTGAACCCAGGAGGCAGAGGTTGCAGTAAGCCAAGATCGTGCCACTGCACTCCAGCCTTGGTGACAGAGCA 1558
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1559 AGACTCCGTCTCCAAAAAAAAGAAAAAAAAATTTCTTGAAGTGGAATGATGTACACCAAATACCCACTTTATAG 1632
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1633 ATAATTACAGGGATGGTGAAAAATTAGTAAATAGCTTCACAAAAGAGGCAGCGTGATACCTTTAGTGTTTTCTA 1706
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1707 GAATTTTTTTCTGGATATTATATGTAAGAATTTATTGTTTGAGGGAAATACGAGGTTTCATTGTTTAAAATCAA 1780
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1781 GAGTGTATTGTTTACTGTTTTACAGTATTATTTAATATCCAACTGGTCTCCAATCTCCATTACATAGGGACTGT 1854
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1855 ACAGAGCCTGTGAAGATGTATGAATGGTATCTTTTATAATCCACAATACATTTCTGGTAAGATGGAATCACTAC 1928
Query 517 -------------------------------------------------------------------------- 516
Sbjct 1929 CTCTGATCACATATCAGGCTAACGATAGAGAAAGCATTAGGTTTAAGTTGAGGGCTAAGAACTGGTTTGTTTAA 2002
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2003 AGGTTTAAATTGTTGGAAAAGAGCATTTGCCTTCTTTAATGAATGATGGTCTCACAATTCAGTTGACTTTGACC 2076
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2077 TAATATTTAAGAATATAAATATATTTTATTTGAAAGGCTGAGTGTTGCCCTCAAACACTTGCTAAAACTGCCTA 2150
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2151 GGGCAGGATTCATTAGGGCTTGCAGACAATGTCACCTAAATTGCTGAATGTACTCATTATAATATGATATCTGA 2224
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2225 CAAAGGTAGTACAGCGTTTCTGAGTCATTTGGGACCAACTGCAGTGGTTGTTTAAAATGCTGGTTCCTGCACAC 2298
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2299 AATTCTCTATCTACTGAAGCACATCTGTTTTCTTTGTTTGTTTTGCTTTGCTTTTTGTTTTTAAAGTTTCCCCC 2372
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2373 AGTGATTCCAGTGCACCTGAAAAGTTGAGAACCACAGGCTTAGTGGTACGTTGGGGTTTCCCACGCTAGGCTGC 2446
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2447 ATAGCATTATAACCTGGGAACGTTAAAAAAAATACAGACATTCTTGATTCTTAGTGTAGTTATGATGTGGATCC 2520
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2521 TACGTATTTTTTAAAAAACTCTCCAGATAATTTTGATGTCACGAGTCACTAGTATAGACTATCTATCTAGTGAG 2594
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2595 TTGTATTATAAGCGATGAAATACTTTAAAAGCTACCCAGTAACTCTTGGGATTAATTTTATGAAATAAATTCTG 2668
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2669 AGCTGCTGCTTTTGATATAGTCAGACTTAAGACTGAACCCCAGTAGACAGGCAATAGATATAGAATTCTGGTTA 2742
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2743 GCTAATTGAACTTTTGTGACCTGTTTAAAAACAAATCAAATTTATTGAACAAATGACAAGGCACAAATACTTTC 2816
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2817 AGAATTGTATTTCAGTTTTGAAGATTTAAAAAAAATGTGAAAATAAATATATATTAGTATCCTTTATTTTAAAG 2890
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2891 TCAATTGTAAACCAGAAGTACTGTTATTTTGGTGATTAAAATCCAAAACTTTAGCTGTATTTCAGTAACAAAAA 2964
Query 517 -------------------------------------------------------------------------- 516
Sbjct 2965 CATACCTTACTAGACTGTGATGGCTCACACCTGTAATCCCAGTGCTTTGGGAGGCTGAGGTGGGAAGATTCTTT 3038
Query 517 -------------------------------------------------------------------------- 516
Sbjct 3039 GAGCCCAGGAGTTCAAGGCTGCAGTGAATTCTGATCGCACCACTGAACTCCAGCCCGTATGACAGAGTGAGACC 3112
Query 517 -------------------------------------------------------------------------- 516
Sbjct 3113 CTGTTTCTAAAAACAAAACAAACAAACAAACAAACAACGTATCTTACTGACTAAACTGGAATGGAAATCTTATA 3186
Query 517 -------------------------------------------------------------------------- 516
Sbjct 3187 ATTAGTGTTGTATTTTTCTGCAAAATAGTGAATTGGTACTTGGGAGACTTCTGTTCTTTGTTGAAAAAAATTGC 3260
Query 517 -------------------------------------------------------------------------- 516
Sbjct 3261 CTTTGTTTTGAAATTATATCACCTGTGTTCTGAACTAAAATGATGGGAGTTCATTTTGTATTTACTTTGCAGTA 3334
Query 517 -------------------------------------------------------------------------- 516
Sbjct 3335 AGTATCATGTAAATATGCAAATGTTGAATGTAATATAGATTGTGTCCTCATTGAGTTTTTGGGTGATACAGTTT 3408
Query 517 -------------------------------------------------------------------------- 516
Sbjct 3409 ATAAATATAACAATTATACACCCTCATACATTCGTCTGATTTTGAGCTTGTAAGATGAGAACTGCTTTTTACAC 3482
Query 517 -------------------------------------------------- 516
Sbjct 3483 ATTTAATAAAAAAAGGTCTCTGAATTATCTGAAAAAAAAAAAAAAAAAAA 3532
