Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03066
- Subject:
- XR_002958478.1
- Aligned Length:
- 2165
- Identities:
- 315
- Gaps:
- 1826
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCAACCTTGGGCGCTGCCAACCGTGGGCGAGCTCTGGGTGTGCGGGCGGCCTGGCGCGGCGCTCCGCTGTGT 74
Query 1 ---------ATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGTAAAGTGAAATATTCAAGGCT 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAGCGTGTTATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGTAAAGTGAAATATTCAAGGCT 148
Query 66 CTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAAGATCCCTTATAAGGCCATCG 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAAGATCCCTTATAAGGCCATCG 222
Query 140 CACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCCTCCTGCTGTCAGGCTACATC 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCCTCCTGCTGTCAGGCTACATC 296
Query 214 AGCAAAGGG-------------------GGG-----------GCAGACC-----------------------GG 234
||||||||| ||| ||.|||| ||
Sbjct 297 AGCAAAGGGAGTCTCGAATCCACCTCACGGGAACAAAAGAAAGCTGACCACAAACATCTACCAGCATCCCGTGG 370
Query 235 GCCGTTCCAGTGCTG------ATCATTGGCATTCTGGTGTTCC------------------------------- 271
| |.|| ||.|| ||||.|||.| ||.||.||
Sbjct 371 G----TACA-TGATGGGAGGCATCAGTGGGA----GGAGTCCCGAAGGAGGACTCAGCTCAAGGCTTCCAGAAG 435
Query 272 -------TACCCGGATTTTACCACCT-----------GCGCATCGCTTA-------CTATGCATC---CAAAGG 317
.||.|.|.|.|.|.||||| |.||.|| || .||.||||| .||.||
Sbjct 436 GAAGAGGAACACAGGTGTCATCACCTGACTGAGGTTGGTGCCTC---TAATTTGAGATAAGCATCTTAAAAGGG 506
Query 318 CT--ACCG----TGGTTACTCCTATG---------------ATGACATTCCAGACT--TTG----ATGAC---- 360
|| ||.| || |||||.| ||||.|.| |||| ||| ||| |
Sbjct 507 CTAAACTGAAAATG-----TCCTAGGAATAAGTACGTCAGCATGAAAAT---GACTGATTGTAAAATG-CAGCA 571
Query 361 -------------------------------------------------------------------------- 360
Sbjct 572 GAGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGGGAATGTTCCATATGCCTAGAGGAGCAGGCCAAAGGAAT 645
Query 361 -------------------------------------------------------------------------- 360
Sbjct 646 TCCAGCTGCCCTCTACCCCCTATGCAACTCCTCTTGTGAATGGTGAGAATGGCGCAGACCACTCCCCATGGCCC 719
Query 361 -------------------------------------------------------------------------- 360
Sbjct 720 CACCTCTGTTCCTGAGGGTAGGAGGATTCCTGTCCCCTTCATACCATCCTTGGTACTGAGAGCGATGCTGAAGA 793
Query 361 -------------------------------------------------------------------------- 360
Sbjct 794 GACTGGGATGCTCATATTCTCACAAAGGGACTGCAGGGTGGTACAGATGGCTGGATGCCCAGTACTACATCCAT 867
Query 361 -------------------------------------------------------------------------- 360
Sbjct 868 TCTCCCCTTTTTCTTTAGTAATAGAACCACTGAACCTTAGCTGGATGAGTAATAAAACCGCTGGATAATCTTGG 941
Query 361 -------------------------------------------------------------------------- 360
Sbjct 942 CCTAACATGGTGATATGATTTGGCTCTGTGTCCCCACCCGAATCTCACTTTGAATTGTAATCCCTGTAATTCCC 1015
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1016 ATGTATCAAAGGAGGTACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTGTGATAGT 1089
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1090 GAGTGACTCTCATGAGATCTGATGGTTTTATAAGCATCTGGCATTTCCCCTGCTTGCACTCACTCTGTCCTGGT 1163
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1164 GCGCTGTGAAGAAGGTGCCTGCTTCTCCTTTGCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCTGGCAA 1237
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1238 TGCAGAACTGTGAGTCAATTAAACTTCTTTTCTTTATAAATTACCTAATCTCGGATATTTCTTCATAGCAGTGT 1311
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1312 GAGAACAGACTAATACGCACAGCCATTAATAGAAAAGCTACGTTTTCCAGCATGCCTTCTAACTAGGTATGGTC 1385
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1386 ATGTGGCTAGGTTCTGACCAATGGAACACAGGTGGAAGTTGTTGGAGAAAACGCCTTAAAACGGGAACAGCTGC 1459
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1460 AATATCAGCTGCAAGACATTCTTTTACCTTTCCACCTGCCTGGGACCTGGATGTGGAACTGCAGTGTGCCTTGC 1533
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1534 AAACTTGAAGAGAACGACCTTGATAATGGATGGTGAAGCAAGAAAGAGGAGCCTGAGGCTGAGCGCAGTGACTC 1607
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1608 ACACCTGTAATCCCAGCACTTTGGGAGGCTAAGGTGGGCAGATTGCTTGAGCCCAGGAATTTGAGACCAGCCTG 1681
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1682 GATAACGCGTGGTGGGCAGTTCCAGGACACCTGACATGTTCCCACTGCAGAAACCACACGGGTTTCTCCAGCAC 1755
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1756 CACTGAGACTTGCTCAGCCTGTGTAGAGTAGCCTGGACATACTGGGGCTTTATTTTCCTGAGGACAACCCTCAA 1829
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1830 CCAATGAGTGCCAGGAATCAGTGAGTAACTGCCCACCTGTTTTCCCCCCTCACCGGATAATTCTGAAGCATCTT 1903
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1904 TTACCCAGCTCTGCAGAGGATCCCTGCAGGACTGAGCCTGGTGCCCGCAGTGATCATCTGCACTTCAATGCACC 1977
Query 361 -------------------------------------------------------------------------- 360
Sbjct 1978 TTTCCTTGGCTTTCCGCCCTGCGCCGTTTCTCACTTCTCCACTACTTGGAGTCCTTTCCAAAGAAACTATCCAT 2051
Query 361 -------------------------------------------------------------------------- 360
Sbjct 2052 ACCTGAAATCTACTTTTACGTAAACCCAAGCTAAGACGGTGGAATATTGCTTCATTTTGAAGTCAGTGGGAGCA 2125
Query 361 ------------------- 360
Sbjct 2126 ATTAAAAGCTTAAACAGGG 2144
