Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03066
Subject:
XR_002958478.1
Aligned Length:
2165
Identities:
315
Gaps:
1826

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAACCTTGGGCGCTGCCAACCGTGGGCGAGCTCTGGGTGTGCGGGCGGCCTGGCGCGGCGCTCCGCTGTGT  74

Query    1  ---------ATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGTAAAGTGAAATATTCAAGGCT  65
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCGTGTTATGATGCCGTCCCGTACCAACCTGGCTACTGGAATCCCCAGTAGTAAAGTGAAATATTCAAGGCT  148

Query   66  CTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAAGATCCCTTATAAGGCCATCG  139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CTCCAGCACAGACGATGGCTACATTGACCTTCAGTTTAAGAAAACCCCTCCTAAGATCCCTTATAAGGCCATCG  222

Query  140  CACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCCTCCTGCTGTCAGGCTACATC  213
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CACTTGCCACTGTGCTGTTTTTGATTGGCGCCTTTCTCATTATTATAGGCTCCCTCCTGCTGTCAGGCTACATC  296

Query  214  AGCAAAGGG-------------------GGG-----------GCAGACC-----------------------GG  234
            |||||||||                   |||           ||.||||                       ||
Sbjct  297  AGCAAAGGGAGTCTCGAATCCACCTCACGGGAACAAAAGAAAGCTGACCACAAACATCTACCAGCATCCCGTGG  370

Query  235  GCCGTTCCAGTGCTG------ATCATTGGCATTCTGGTGTTCC-------------------------------  271
            |    |.|| ||.||      ||||.|||.|    ||.||.||                               
Sbjct  371  G----TACA-TGATGGGAGGCATCAGTGGGA----GGAGTCCCGAAGGAGGACTCAGCTCAAGGCTTCCAGAAG  435

Query  272  -------TACCCGGATTTTACCACCT-----------GCGCATCGCTTA-------CTATGCATC---CAAAGG  317
                   .||.|.|.|.|.|.|||||           |.||.||   ||       .||.|||||   .||.||
Sbjct  436  GAAGAGGAACACAGGTGTCATCACCTGACTGAGGTTGGTGCCTC---TAATTTGAGATAAGCATCTTAAAAGGG  506

Query  318  CT--ACCG----TGGTTACTCCTATG---------------ATGACATTCCAGACT--TTG----ATGAC----  360
            ||  ||.|    ||     |||||.|               ||||.|.|   ||||  |||    ||| |    
Sbjct  507  CTAAACTGAAAATG-----TCCTAGGAATAAGTACGTCAGCATGAAAAT---GACTGATTGTAAAATG-CAGCA  571

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  572  GAGAGCTTCTCCTACTAAGAGCAGGATATGTGGAGGGAATGTTCCATATGCCTAGAGGAGCAGGCCAAAGGAAT  645

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  646  TCCAGCTGCCCTCTACCCCCTATGCAACTCCTCTTGTGAATGGTGAGAATGGCGCAGACCACTCCCCATGGCCC  719

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  720  CACCTCTGTTCCTGAGGGTAGGAGGATTCCTGTCCCCTTCATACCATCCTTGGTACTGAGAGCGATGCTGAAGA  793

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  794  GACTGGGATGCTCATATTCTCACAAAGGGACTGCAGGGTGGTACAGATGGCTGGATGCCCAGTACTACATCCAT  867

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  868  TCTCCCCTTTTTCTTTAGTAATAGAACCACTGAACCTTAGCTGGATGAGTAATAAAACCGCTGGATAATCTTGG  941

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct  942  CCTAACATGGTGATATGATTTGGCTCTGTGTCCCCACCCGAATCTCACTTTGAATTGTAATCCCTGTAATTCCC  1015

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1016  ATGTATCAAAGGAGGTACTAGGTGGAGGTAATTGGATCATGGGGTGGTTTCCCCCAAGCTGTTCTTGTGATAGT  1089

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1090  GAGTGACTCTCATGAGATCTGATGGTTTTATAAGCATCTGGCATTTCCCCTGCTTGCACTCACTCTGTCCTGGT  1163

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1164  GCGCTGTGAAGAAGGTGCCTGCTTCTCCTTTGCCTTCCACCATGATTGTAAGTTTCCTGAGGCCTCCCTGGCAA  1237

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1238  TGCAGAACTGTGAGTCAATTAAACTTCTTTTCTTTATAAATTACCTAATCTCGGATATTTCTTCATAGCAGTGT  1311

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1312  GAGAACAGACTAATACGCACAGCCATTAATAGAAAAGCTACGTTTTCCAGCATGCCTTCTAACTAGGTATGGTC  1385

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1386  ATGTGGCTAGGTTCTGACCAATGGAACACAGGTGGAAGTTGTTGGAGAAAACGCCTTAAAACGGGAACAGCTGC  1459

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1460  AATATCAGCTGCAAGACATTCTTTTACCTTTCCACCTGCCTGGGACCTGGATGTGGAACTGCAGTGTGCCTTGC  1533

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1534  AAACTTGAAGAGAACGACCTTGATAATGGATGGTGAAGCAAGAAAGAGGAGCCTGAGGCTGAGCGCAGTGACTC  1607

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1608  ACACCTGTAATCCCAGCACTTTGGGAGGCTAAGGTGGGCAGATTGCTTGAGCCCAGGAATTTGAGACCAGCCTG  1681

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1682  GATAACGCGTGGTGGGCAGTTCCAGGACACCTGACATGTTCCCACTGCAGAAACCACACGGGTTTCTCCAGCAC  1755

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1756  CACTGAGACTTGCTCAGCCTGTGTAGAGTAGCCTGGACATACTGGGGCTTTATTTTCCTGAGGACAACCCTCAA  1829

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1830  CCAATGAGTGCCAGGAATCAGTGAGTAACTGCCCACCTGTTTTCCCCCCTCACCGGATAATTCTGAAGCATCTT  1903

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1904  TTACCCAGCTCTGCAGAGGATCCCTGCAGGACTGAGCCTGGTGCCCGCAGTGATCATCTGCACTTCAATGCACC  1977

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 1978  TTTCCTTGGCTTTCCGCCCTGCGCCGTTTCTCACTTCTCCACTACTTGGAGTCCTTTCCAAAGAAACTATCCAT  2051

Query  361  --------------------------------------------------------------------------  360
                                                                                      
Sbjct 2052  ACCTGAAATCTACTTTTACGTAAACCCAAGCTAAGACGGTGGAATATTGCTTCATTTTGAAGTCAGTGGGAGCA  2125

Query  361  -------------------  360
                               
Sbjct 2126  ATTAAAAGCTTAAACAGGG  2144

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