Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03181
- Subject:
- NR_037924.2
- Aligned Length:
- 2785
- Identities:
- 417
- Gaps:
- 2339
Alignment
Query 1 -----------------------------------ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTT 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTGGCTCCTGGAAGCAGGGCTGGCGTAGGGCCGCCATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTT 74
Query 40 TCACTGTTTGATGCGGAAGAGGAGACGACTAATAGACCAAGAAAAGCCAAAATCAGACATCCAGTAGCATCGTT 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCACTGTTTGATGCGGAAGAGGAGACGACTAATAGACCAAGAAAAGCCAAAATC-------------------- 128
Query 114 TTTCCACTTATTCTTTCGAGTCAGTGCAATCATCGTCTATCTTCTCTGTGGGTTGCTCAGCAGCAGCTTTATTA 187
Sbjct 129 -------------------------------------------------------------------------- 128
Query 188 CCTGTATGGTGACAATTATCTTGTTGTTGTCGTGTGACTTTTGGGCAGTGAAGAATGTCACAGGTAGACTAATG 261
|||||||||||||||||||||||
Sbjct 129 ---------------------------------------------------AGAATGTCACAGGTAGACTAATG 151
Query 262 GTTGGCCTACGTTGGTGGAATCACATTGATGAAGATGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTC 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 GTTGGCCTACGTTGGTGGAATCACATTGATGAAGATGGAAAGAGCCATTGGGTGTTTGAATCTAGAAAGGAGTC 225
Query 336 CTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAATCAAGAATCTTTTGGTTGGGACTTATTGCCTGTCCAGTAC 409
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 226 CTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAATCAAGAATCTTTTGGTTGGGACTTATTGCCTGTTCAGTAC 299
Query 410 TGTGGGTGATATTTGCTTTTAGTGCACTCTTCTCCTTCAGAGTAAAGTGGTTGG---------CGGTG--GTT- 471
||||||||||||||||.||||||||||||||||||||||.||||||||||.||| |.||| |||
Sbjct 300 TGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCCTTCACAGTAAAGTGGCTGGAATCTGAACCTGTGATGTTA 373
Query 472 ----ATCATGGGT----------------GTGG-TGCTACAAGGTGCCAACCTGTATGGTTACATCAGGTGTAA 524
|||| || .||| |||.|.|||| |||...|.|..|| ||
Sbjct 374 AGAAATCA---GTAAATATTAAAAAGAAGATGGATGCAAGAAGG-----------ATGAAGAAAGAAG----AA 429
Query 525 GGTGCGCAGCAGAAA-----GCATTTAACCAGCATGGCTACTT----------------------CATATTT-- 569
|| .|.|| |||||| |.|.||..||.|.| ||||||| |.|||.|
Sbjct 430 GG-ACTCA-CAGAAAACACTGGACTTCCCCGGAA--GCTACTTGAAAAACATGACCCCTGGCCGGCCTATGTCA 499
Query 570 ------------------TGGAAAGCAGTTTTTAAGA----CAAAAC------ACTGGAGATG-AT-------- 606
||.|||| |.|..||.||| |||||| |||||| ||| ||
Sbjct 500 CCTATACCTCTCAGACAGTGAAAAG-ACTCATTGAGAAAAGCAAAACTAGAGAACTGGA-ATGCATGCGTGCCC 571
Query 607 --------------------------CAGA------CTTCC--------------------------------- 615
|||| |||||
Sbjct 572 TCGAGGAAAGACCCTGGGCATCAAGGCAGAATAAACCTTCCAGCGTCATTCAGCCGAAAAGGAGGAAGTCTTCC 645
Query 616 -------------------------------------------------------------------------- 615
Sbjct 646 AAGTCTTCTGGCAAAGCTGTGTTCAGGGACACGCTGTCAGAATCCACGTTATCAATGTGGGGCGCTTATTCGGT 719
Query 616 -------------------------------------------------------------------------- 615
Sbjct 720 ATTGGCCATGGCTCCTACCATGATCCCAGAACCCACACACTTACATGCGGATTCCAGAGACTGTCCAACTGAAA 793
Query 616 -------------------------------------------------------------------------- 615
Sbjct 794 ACTATAACAAGATCATCTTTGCCCGCAAGCCTATGATGAGGATGCTCCCTACAGTTCGCTACTGACCAACAAGG 867
Query 616 -------------------------------------------------------------------------- 615
Sbjct 868 AGAAACATGCAAATGTTTTAGCCAGGGGTCCCTGCAGCCATTCCCCAAGAACGTACAAAAGTTAAGCTCCATTT 941
Query 616 -------------------------------------------------------------------------- 615
Sbjct 942 ACCACTCACTTGACAGTGTCCTTTAAATCTGAACTTGCTCTTGCTCATGCGGAGCTTGGCTAAGAGAAACCAGA 1015
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1016 TCAGAATGCAAGCTGTAGGTGGGTGGGTGAGTGTGTCCCCTCCCACACTGCTCTCTGGTGGGTTTGGGCAGTCC 1089
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1090 CTGGCTCTAGTCTCTGCTGCAGATTCTCAGGACCAAAATGTGGGTGATTTGTCTGGGTCCAGGCAGGAGACAGA 1163
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1164 AATCACACAAGCTCTTTTATTAGAGATAATATAAAGAATGATTAACCAGGTGACAGTAAAGGGCAGGAAGGGAA 1237
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1238 TACAAAGGTATCCATGGAGGTAGCACCACAGGAAGCAGGCATCACACTTGAGGCTTGGGAACAAGGGGAAGATG 1311
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1312 CTGGACTCATTGAAAGGTGGTTGCTTGGAGAAGGGACATGGGGCTGAATCTCAGACTTCTGAGGTGGGGGAGTG 1385
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1386 GGGATGCCACTCAATGCAGCTGGTATCTCTGAGCTCTGAGGAGAGTCCTGTGGGGATGGTGCCCCCTCCTCTGA 1459
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1460 ATAGGGGAGATGTTTTGTTGGTGTCTCTGAGGGGACCCCCATGAGGCTGCTTTTGTGAGTGTTGGAAAAACCAA 1533
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1534 AAACTGCATTGAAATGTTTCTGGGAGGAGTTGCCACTGCCTGGGTGAAGAAAAAGCACTGCTAGGGTTAGCAAC 1607
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1608 CTGTCTGGCAAGGGACAGGAAGCTGATAGAAAGTGAACAGGAAGCAAACAGGAAGTGAGCAAGGGGCCACTTCC 1681
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1682 TACTTCCTCCTTTAGCCTAGCAGATTCCTTCTAGCTCCCCCTGGGGGCTGAGCCTATCAGGGCACAAAGCCAGA 1755
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1756 ATGTGGTTTGTAGAATCCCAGCCCCAGCATCTCCAAGCATAGGATGGATTTTGAAGCCAAGAGGGAATTAGCTC 1829
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1830 TCGGCCGGGTTCTGAGTGATCCCATCCAGCTGCTCCTGGACCTGGTATTGAGAGGTTTTTCCCTTGGAGGGCAA 1903
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1904 ACAAAGTGGCAGTGGGGACCAGGGTGTCCCCTGCTGAGAAATGGAGAGCTCTTTTCCCCTGTACTTCTCTGGGG 1977
Query 616 -------------------------------------------------------------------------- 615
Sbjct 1978 TTTGCCTTGTGGAACCAAGTGCTTGGGGGAGGAGCTCCTGGCAGGACTCCAGCTGTTATTTGTCAGAGGACAGC 2051
Query 616 -------------------------------------------------------------------------- 615
Sbjct 2052 TAGGATTGGTTCACCCTTGCTCTGAGTTGGCCCCAAAGCGAGCTATGCTGAACTCTTCTCCATCTCCAAGCAGA 2125
Query 616 -------------------------------------------------------------------------- 615
Sbjct 2126 CAACCTTTGTCTTTACATGCAAGAGGGATCCAATTATGACAGGCTGACCCAGCTGGTTTCATGTTTGGGGTTTA 2199
Query 616 -------------------------------------------------------------------------- 615
Sbjct 2200 TCTACTGAGTAAGGCTGACCTTACCTGAGTTTCTGTATGTGTATTTGCAAGACAGTTAATACTAATCCATCATC 2273
Query 616 -------------------------------------------------------------------------- 615
Sbjct 2274 CCTCACAGAGATGTAGAGGATGAGATGTAGTAACTTATAGCAGTGTCATTTGGAAAAGTTGAATTTGCCCTACA 2347
Query 616 -------------------------------------------------------------------------- 615
Sbjct 2348 AGGCATGTTCTCCATTCAAGGGTCTTGTGTAAACGTTTGCAGACACAGGTGCAGCTTTGGAGAACTCACCTCTG 2421
Query 616 -------------------------------------------------------------------------- 615
Sbjct 2422 GCTCTTGTGCTTTTATGTTGGGACAGCTGCCTAAATTAGGAGCTCTAGACCTGTTATTGGTTCCCAACTGTTGG 2495
Query 616 -------------------------------------------------------------------------- 615
Sbjct 2496 CCAGAATGAATTCTTCGAAAAATATAGGTGGTTTCCAGGGAATTTGAATGATTGTATTTTGTGTCCATGGAACG 2569
Query 616 ----------------------------------------------- 615
Sbjct 2570 TTTATAGACATGGAGGCAGGCAATAAATTCCTCCAATAATTTTTTTA 2616
