Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03217
- Subject:
- NR_024109.1
- Aligned Length:
- 1048
- Identities:
- 533
- Gaps:
- 476
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTTTTTGGGCGTGGAAAGATGGCGGTAAAAGCCACAATGCGCAGGCGTCATCGCTCACTTCTCCCCTCCCGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCTGCTCCACCTGACGCCTGCGCAGTAAGTAAGCCTGCCAGACACGCTGTGGCGGCTGCCTGAAGCTAGTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGCGGCGCCGCGCACTTGTGGTTGGGTCAGTGCCGCGCGCCGCTCGGTCGTTACCGCGAGGCGCTGGTGGCCT 222
Query 1 -------------------------------------------------------------ATGTCGATCTTCA 13
|||||||||||||
Sbjct 223 TCAGGCTGGACGGCGCGGGTCAGCCCTGGTTTGCCGGCTTCTGGGTCTTTGAACAGCCGCGATGTCGATCTTCA 296
Query 14 CCCCCACCAACCAGATCCGCCTAACCAATGTGGCCGTGGTACGGATGAAGCGTGCCGGGAAGCGCTTCGAAATC 87
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||||||
Sbjct 297 CCCCCACCAACCAGATCCGCCTAACCAATGTGGCCGTGGTACGGATGAAGCGCGCCAGGAAGCGCTTCGAAATC 370
Query 88 GCCTGCTACAAAAACAAGGTCGTCGGCTGGCGGAGCGGCGTGGAAAAAGACCTCGATGAAGTTCTGCAGACCCA 161
||||||||||.||||||||||||||||||||||||||||.|
Sbjct 371 GCCTGCTACAGAAACAAGGTCGTCGGCTGGCGGAGCGGCTT--------------------------------- 411
Query 162 CTCAGTGTTTGTAAATGTTTCTAAAGGTCAGGTTGCCAAAAAGGAAGATCTCATCAGTGCGTTTGGAACAGATG 235
Sbjct 412 -------------------------------------------------------------------------- 411
Query 236 ACCAAACTGAAATCTGTAAGCAGATTTTGACTAAAGGAGAAGTTCAAGTATCAGATAAAGAAAGACACACACAA 309
||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 412 -----------------------ATTTTGACTAAAGGAGAAGTTCAAGTATCAGAT----AAAGACACACACAA 458
Query 310 CTGGAGCAGATGTTTAGGGACATTGCAACTATTGTGGCAGACAAATGTGTGAATCCTGAAACAAAGAGACCATA 383
||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 459 CTGGAGCAGATGTTTAGGGACATTGCAATTATTGTGGCAGACAAATGTGTGACTCCTGAAACAAAGAGACCATA 532
Query 384 CACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTCGGTGAAAACCAACAAGAGTACAAAACAGC 457
||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||
Sbjct 533 CACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTTGGTGAAAACCAACAGGAGTACAAAACAGC 606
Query 458 AGGCTTTGGAAGTGATAAAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCGGTTCATC 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 607 AGGCTTTGGAAGTGATAAAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCAGTTCATC 680
Query 532 CTTCCAGTCAATGAAGGCAAGAAGCTGAAAGAAAAGCTCAAGCCACTGATCAAGGTCATAGAAAGTGAAGATTA 605
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 681 CTTCCAGTGAATGAAGGCAAGAAGCTGAAAGAAAAGCTCAAGCCACTGATCAAGGTCATAGAAAGTAAAGATTA 754
Query 606 TGGCCAACAGTTAGAAATCGTA--------------TGTCTGATTGACCCGGGCTGCTTCCGAGAAATTG-ATG 664
|||||||||||||||||||||| |.|.||.||.| ||.|.||.|.|.|||| ||.
Sbjct 755 TGGCCAACAGTTAGAAATCGTAAGAGTCAAATATTTTCTTTGCTTCA-------TGTTACCTAAATATTGTATT 821
Query 665 AGCTAATAAAAAAGGAAACTAAAGGCAAAGGTTCTTTGGAAGTACTCAATCTGAAAGATGTAGAAGAAGGAGAT 738
..|||.|||.||| ||.|.||.|..||.||..|||.|...|.||.||
Sbjct 822 CTCTAGTAATAAA----------------------TTTGTAGCAAACATTCAAAAAAAAAAAAAAAAA------ 867
Query 739 GAGAAATTTGAA 750
|||
Sbjct 868 ---AAA------ 870