Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03217
- Subject:
- NR_024111.1
- Aligned Length:
- 1747
- Identities:
- 601
- Gaps:
- 1132
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTTTTTGGGCGTGGAAAGATGGCGGTAAAAGCCACAATGCGCAGGCGTCATCGCTCACTTCTCCCCTCCCGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCTGCTCCACCTGACGCCTGCGCAGTAAGTAAGCCTGCCAGACACGCTGTGGCGGCTGCCTGAAGCTAGTGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGCGGCGCCGCGCACTTGTGGTTGGGTCAGTGCCGCGCGCCGCTCGGTCGTTACCGCGAGGCGCTGGTGGCCT 222
Query 1 -------------------------------------------------------------ATGTCGATCTTCA 13
|||||||||||||
Sbjct 223 TCAGGCTGGACGGCGCGGGTCAGCCCTGGTTTGCCGGCTTCTGGGTCTTTGAACAGCCGCGATGTCGATCTTCA 296
Query 14 CCCCCACCAACCAGATCCGCCTAACCAATGTGGCCGTGGTACGGATGAAGCGTGCCGGGAAGCGCTTCGAAATC 87
||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||||||||||||
Sbjct 297 CCCCCACCAACCAGATCCGCCTAACCAATGTGGCCGTGGTACGGATGAAGCGCGCCAGGAAGCGCTTCGAAATC 370
Query 88 GCCTGCTACAAAAACAAGGTCGTCGGCTGGCGGAGCGGCGTGGAAAAAGACCTCGATGAAGTTCTGCAGACCCA 161
||||||||||.||||||||||||||||||||||||||||.|
Sbjct 371 GCCTGCTACAGAAACAAGGTCGTCGGCTGGCGGAGCGGCTT--------------------------------- 411
Query 162 CTCAGTGTTTGTAAATGTTTCTAAAGGTCAGGTTGCCAAAAAGGAAGATCTCATCAGTGCGTTTGGAACAGATG 235
Sbjct 412 -------------------------------------------------------------------------- 411
Query 236 ACCAAACTGAAATCTGTAAGCAGATTTTGACTAAAGGAGAAGTTCAAGTATCAGATAAAGAAAGACACACACAA 309
||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 412 -----------------------ATTTTGACTAAAGGAGAAGTTCAAGTATCAGAT----AAAGACACACACAA 458
Query 310 CTGGAGCAGATGTTTAGGGACATTGCAACTATTGTGGCAGACAAATGTGTGAATCCTGAAACAAAGAGACCATA 383
||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 459 CTGGAGCAGATGTTTAGGGACATTGCAATTATTGTGGCAGACAAATGTGTGACTCCTGAAACAAAGAGACCATA 532
Query 384 CACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTCGGTGAAAACCAACAAGAGTACAAAACAGC 457
||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||
Sbjct 533 CACCGTGATCCTTATTGAGAGAGCCATGAAGGACATCCACTATTTGGTGAAAACCAACAGGAGTACAAAACAGC 606
Query 458 AGGCTTTGGAAGTGATAAAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCGGTTCATC 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 607 AGGCTTTGGAAGTGATAAAGCAGTTAAAAGAGAAAATGAAGATAGAACGTGCTCACATGAGGCTTCAGTTCATC 680
Query 532 CTTCCAGTCAATGAAGGCAAGAAGCTGAAAGAAAAGCTCAAGCCACTGATCAAGGTCATAGAAAGTGAAGATTA 605
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 681 CTTCCAGTGAATGAAGGCAAGAAGCTGAAAGAAAAGCTCAAGCCACTGATCAAGGTCATAGAAAGTAAAGATTA 754
Query 606 TGGCCAACAGTTAGAAATCGTATGTCTGATTGACCCGGGCTGCTTCCGAGAAATTGATGAGCTAATAAAAAAGG 679
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 755 TGGCCAACAGTTAGAAATCGTATGTCTGATTGACCTGGGCTGCTTCCGAGAAATTGATGAGCTAATAAAAAAGG 828
Query 680 AAACTAAAGGCAAAGGTTCTTTGGAAGTACTCAATCTGAAAGATGTAGAAGAAGGAGATGAGAAATTTGAA--- 750
||||.||||||||||||||||||||||||||||||||||||||| |.||||||||||||||||||||||||
Sbjct 829 AAACCAAAGGCAAAGGTTCTTTGGAAGTACTCAATCTGAAAGAT-TTGAAGAAGGAGATGAGAAATTTGAATGA 901
Query 751 -------------------------------------------------------------------------- 750
Sbjct 902 CACCCATCAGTCTCTTCACCTCTAAAACACTAAAGTGTTTTCGTTTCCAACAGCACTGTTTCATGTCTGTGGTC 975
Query 751 -------------------------------------------------------------------------- 750
Sbjct 976 TGCCAAATACTTGCTCAAACTATTTGACATTTTCTATCTTTGTGTTAACAGTGGACACAGCAAGGCTTTCCTAC 1049
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1050 ATAAGTATAATAATGTGGGAATGATTTGGTTTTAATTATAAACTGGGGTCTAAATCCTAAAGCAAAATTGAAAC 1123
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1124 TCCAGGATGCAAAATCCAGAGTGGCATTTTGCTACTCTGTCTCATGCCTTGATAGCTTTCCAAAATGAAAGTTA 1197
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1198 CTTGAGGCAGCTCTTGTGGGTGAAAAGTTTTTTGTACAGTAGAGTAAGATTATTAGGGGTATGTCTATACGACA 1271
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1272 AAAGGGGGGTCTTTCCTAAAAAAGAAAACATGATGCTTCATTTCTACTTAATGGAACTTGTGTTCTGAGGGTCA 1345
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1346 TTATGGTATCGTAATATAAAGCTTGGATGATGTTCCTGATTATCTGAGAAACAGATATAGAAAAATTGTGTCGG 1419
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1420 ACTTAAATAATTTTCGTTGAACATGCTGCCATAACTTAGATTATTCTTGGTTAAAAAATAAAAGTCACTTATTT 1493
Query 751 -------------------------------------------------------------------------- 750
Sbjct 1494 CTAATTCTTAAAGTTTATAATATATATTAATATAGCTAAAATTGTATGTAATCAATAAAACCACTCTTATGTTT 1567
Query 751 --------------------------------------------- 750
Sbjct 1568 ATTAAACTATGGCTTGTGTTTCTAGACAAAAAAAAAAAAAAAAAA 1612
