Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03238
- Subject:
- XM_011240206.1
- Aligned Length:
- 1234
- Identities:
- 724
- Gaps:
- 419
Alignment
Query 1 ATGATGAAGAAGAACAATTCCGCCAAGCGGGGACCTCAGGATGGAAACCAGCAGCCTGCACCGCCCGAGAAGGT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CGGCTGGGTCCGGAAATTCTGCGGGAAAGGGATTTTCAGGGAGATTTGGAAAAACCGCTATGTGGTGCTGAAAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GGGACCAGCTCTACATCTCTGAGAAGGAGGTAAAAGATGAGAAAAATATTCAAGAGGTATTTGACCTGAGTGAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TATGAGAAGTGTGAAGAGCTCCGGAAGTCCAAGAGCAGGAGCAAGAAAAATCATAGCAAGTTTACTCTTGCCCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CTCCAAACAGCCCGGTAACACGGCACCCAACCTGATCTTCCTGGCAGTGAGTCCAGAAGAGAAGGAATCGTGGA 370
|
Sbjct 1 -------------------------------------------------------------------------A 1
Query 371 TCAATGCCCTCAACTCTGCCATCACCCGAGCCAAGAACCGTATCTTGGATGAGGTCACCGTTGAGGAGGACAGC 444
|.|.|| ||.|||| |.|||||||||||||||||||||||
Sbjct 2 TGAGTG----CATCTCT--------------------------------TCAGGTCACCGTTGAGGAGGACAGC 39
Query 445 TATCTTGCCCATCCCACTCGAGACAGGGCAAAAATCCAGCACTCCCGCCGCCCCCCAACAAGGGGACACCTAAT 518
|||||||||||.||.|||||||||||.|||||||||||.|||||||||||.||.|||||..||||||||||.||
Sbjct 40 TATCTTGCCCACCCTACTCGAGACAGAGCAAAAATCCAACACTCCCGCCGTCCTCCAACCCGGGGACACCTCAT 113
Query 519 GGCTGTGGCTTCCACCTCTACCTCGGATGGGATGCTGACCTTGGACTTGATCCAAGAGGAAGACCCTTCCCCTG 592
||||||||||||.|||||||||||.|||||||||||.||.||.|||.|||||||||||||||||||||||||||
Sbjct 114 GGCTGTGGCTTCGACCTCTACCTCAGATGGGATGCTAACATTAGACCTGATCCAAGAGGAAGACCCTTCCCCTG 187
Query 593 AGGAACCAACCTCTTGTGCTGAGAGCTTTCGGGTTGACCTGGACAAGTCTGTGGCCCAGCTGGCAGGGAGCCGG 666
||||.|||.|||||||||||||||||||.|||||.||.||||||||||||||||||||||||||.||.||.||.
Sbjct 188 AGGAGCCAGCCTCTTGTGCTGAGAGCTTCCGGGTCGATCTGGACAAGTCTGTGGCCCAGCTGGCTGGCAGTCGA 261
Query 667 CGGAGAGCGGACTCAGACCGCATCCAGCCCTC--CGCAGACCGGGCAAGCAGTCTCTCCCGACCTTGGGAAAAA 738
||||||||||||||||||.|.||||||||||| ||||| |||||||||||.||.||.||.||||||||||||
Sbjct 262 CGGAGAGCGGACTCAGACAGGATCCAGCCCTCTTCGCAG--CGGGCAAGCAGCCTTTCTCGGCCTTGGGAAAAA 333
Query 739 ACAGACAAAGGGGCCACCTACACCCCCCAGGCACCCAAGAAGTTGACGCCC----ACAGAGAAAGGCCGCTGCG 808
.|||||||.||.|||.||||||||||.||.||||..|||||||| ||| ||||||||..||||.||.|
Sbjct 334 CCAGACAAGGGAGCCCCCTACACCCCACAAGCACTGAAGAAGTT----CCCCAGTACAGAGAAGAGCCGATGTG 403
Query 809 CCTCCCTGGAGGAGATCCTATCTCAGCGGGATGCTGCCTCTGCCCGCACCCTCCAGCTGCGGGCTGAGGAACCC 882
||||||||||||||||||||||.|||.||||..|||||.|.||||||.||||.||.||.|..|||||||||.||
Sbjct 404 CCTCCCTGGAGGAGATCCTATCCCAGAGGGACACTGCCCCAGCCCGCCCCCTTCACCTTCAAGCTGAGGAATCC 477
Query 883 CCAACCCCTG-CCCTCCCCAACCCGGGGCAGCTGTCCCGGATCCAGGACCTGGTAGCAAGGAAACTGGAGGAGA 955
|.|.|||||| ||||.||| |.||.|||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 478 CTACCCCCTGTCCCTGCCC-AGCCAGGGCAGCTGTCCCGGATCCAGGACCTGGTAGCAAGGAAACTGGAGAAGA 550
Query 956 CTCAGGAGCTTCTGGCAGAGGTTCAGGGACTGGGAGATGGGAAGCGAAAGGCCAAGGACCCCCCTCGGTCTCCG 1029
||||||||||.|||||||||||||||||||||||.||.||.|||||.|||||||||||||||||.|.||||||.
Sbjct 551 CTCAGGAGCTGCTGGCAGAGGTTCAGGGACTGGGTGACGGCAAGCGGAAGGCCAAGGACCCCCCACAGTCTCCA 624
Query 1030 CCGGATTCTGAGTCAGAGCAGCTGCTGCTGGAGACGGAACGGCTGCTGGGAGAGGCATCATCGAATTGGAGCCA 1103
||.||.||.|||||.||||||||||||||||||||.||..||||||||||||||||.||.||.||.||||||||
Sbjct 625 CCCGACTCGGAGTCGGAGCAGCTGCTGCTGGAGACAGAGAGGCTGCTGGGAGAGGCTTCCTCCAACTGGAGCCA 698
Query 1104 GGCAAAGAGGGTGCTGCAGGAGGTCAGGGAGCTGAGAGACCTGTACAGACAGATGGACCTGCAGACCCCGGACT 1177
|||||||||.|||||||||||.|||.||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 699 GGCAAAGAGAGTGCTGCAGGAAGTCCGGGAGCTGAGAGACCTGTACAGGCAGATGGACCTGCAGACCCCGGACT 772
Query 1178 CCCACCTCAGACAGACCACCCCGCACAGTCAGTACCGGAAGAGCCTGATG 1227
|||||||||||||||||.|||.|||||||||.||||||||||||||||||
Sbjct 773 CCCACCTCAGACAGACCTCCCAGCACAGTCAATACCGGAAGAGCCTGATG 822