Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03289
- Subject:
- XM_011539857.1
- Aligned Length:
- 1686
- Identities:
- 1164
- Gaps:
- 492
Alignment
Query 1 ATGAGGCACTGCATTAATTGCTGCATACAGCTGTTACCCGACGGCGCACACAAGCAGCAGGTCAACTGCCAAGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGGCACTGCATTAATTGCTGCATACAGCTGTTACCCGACGGCGCACACAAGCAGCAGGTCAACTGCCAAGG 74
Query 75 GGGCCCCCATCACGGTCACCAGGCGTGCCCCACGTGCAAAGGAGAAAACAAAATTCTGTTTCGTGTGGACAGTA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGCCCCCATCACGGTCACCAGGCGTGCCCCACGTGCAAAGGAGAAAACAAAATTCTGTTTCGTGTGGACAGTA 148
Query 149 AGCAGATGAACTTGCTTGCTGTTCTCGAAGTGAGGACTGAAGGGAACGAAAACTGGGGTGGGTTTTTGCGCTTC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGCAGATGAACTTGCTTGCTGTTCTCGAAGTGAGGACTGAAGGGAACGAAAACTGGGGTGGGTTTTTGCGCTTC 222
Query 223 AAAAAGGGGAAGCGATGTAGCCTCGTTTTTGGACTGATAATAATGACCTTGGTAATGGCTTCTTACATCCTTTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAAAAGGGGAAGCGATGTAGCCTCGTTTTTGGACTGATAATAATGACCTTGGTAATGGCTTCTTACATCCTTTC 296
Query 297 TGGGGCCCACCAAGAGCTTCTGATCTCATCACCTTTCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGATGG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGGGGCCCACCAAGAGCTTCTGATCTCATCACCTTTCCATTACGGAGGCTTCCCCAGCAACCCCAGCTTGATGG 370
Query 371 ACAGCGAAAACCCAAGTGACACAAAGGAGCATCACCACCAATCCTCTGTAAATAATATTTCATACATGAAGGAC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAGCGAAAACCCAAGTGACACAAAGGAGCATCACCACCAATCCTCTGTAAATAATATTTCATACATGAAGGAC 444
Query 445 TATCCAAGCATTAAATTAATTATCAACAGCATCACAACTAGGATTGAGTTCACGACCAGACAGCTCCCAGACTT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TATCCAAGCATTAAATTAATTATCAACAGCATCACAACTAGGATTGAGTTCACGACCAGACAGCTCCCAGACTT 518
Query 519 AGAAGACCTTAAGAAGCAGGAGTTGCATATGTTTTCAGTCATCCCCAACAAATTCCTTCCAAACAGTAAGAGCC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGAAGACCTTAAGAAGCAGGAGTTGCATATGTTTTCAGTCATCCCCAACAAATTCCTTCCAAACAGTAAGAGCC 592
Query 593 CCTGTTGGTACGAGGAGTTCTCGGGGCAGAACACCACCGACCCCTACCTCACCAACTCCTACGTGCTCTACTCC 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTGTTGGTACGAGGAGTTCTCGGGGCAGAACACCACCGACCCCTACCTCACCAACTCCTACGTGCTCTACTCC 666
Query 667 AAGCGCTTCCGCTCCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGCGCTTCCGCTCCACCTTCGACGCCCTGCGCAAGGCCTTCTGGGGCCACCTGGCGCACGCGCACGGGAAGCA 740
Query 741 CTTCCGCCTGCGCTGCCTGCCGCACTTCTACATCATAGGGCAGCCCAAGTGCGGGACCACAGACCTCTATGACC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTTCCGCCTGCGCTGCCTGCCGCACTTCTACATCATAGGGCAGCCCAAGTGCGGGACCACAGACCTCTATGACC 814
Query 815 GCCTGCGGCTGCACCCTGAGGTCAAGTTCTCCGCCATCAAGGAGCCACACTGGTGGACCCGGAAGCGCTTTGGA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCCTGCGGCTGCACCCTGAGGTCAAGTTCTCCGCCATCAAGGAGCCACACTGGTGGACCCGGAAGCGCTTTGGA 888
Query 889 ATCGTCCGCCTAAGAGATGGGCTGCGAGACCGCTATCCCGTGGAAGATTATCTGGACCTCTTTGACCTGGCCGC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCGTCCGCCTAAGAGATGGGCTGCGAGACCGCTATCCCGTGGAAGATTATCTGGACCTCTTTGACCTGGCCGC 962
Query 963 ACACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATACAATCATTATCGGGG 1036
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ACACCAGATCCATCAAGGACTGCAGGCCAGCTCTGCAAAGGAGCAGAGCAAGATGAATACAATCATTATCGGG- 1035
Query 1037 AGGCCAGTGCCTCCACGATGTGGGATAATAATGCCTGGACGTTCT-TCTACGACAACAGCACGGATGGCGAGCC 1109
||.|| ||| |.|| |.||.||.|.|
Sbjct 1036 -------------------------TATTA------------TCTCTTTA--AAAAAAGAAAG----------- 1059
Query 1110 ACCGTTTCTGACGCAGGACTTCATCCACGCCTTTCAGCCAAATGCCAG-ACTGA-TTGTCATGCTCAGGGACCC 1181
|.|.|||.||||| ||.|| .||| ||| ||
Sbjct 1060 -----------------------------------AACAAAAGGCCAGAACAGAGCTGT-----TCA-----CC 1088
Query 1182 TGTGGAGAGGTTGTACTCAGACTATCTCTACTTTGCAAGTTCGAATAAATCCGCGGACGACTTCCATGAGAAAG 1255
|| ||.|| ||.|| |||...|||| |||||
Sbjct 1089 TG----GATGT--------GATTA---------------------------CGCATCCGAC-------AGAAA- 1115
Query 1256 TGACAGAAGCACTGCAGCTGTTTGAAAATTGCATGCTTGATTATTCACTGCGCGCCTGCGTCTACAACAACACC 1329
|||.||..|| ||||||...|.||| |.|| |||| |||||| ||.| ||.|..
Sbjct 1116 TGATAGGGGC-CTGCAGGGATATGA----TACA--CTTG-----TCACTG-------------ACCA-AAGAGA 1163
Query 1330 CTCAACAACGCCATGCCTGTGAGGCTCCAGGTTGGGCTCTATGCTGTGTACCTTCTGGACTGGCTCAGCGTTTT 1403
|||| |.||| |||||||||
Sbjct 1164 CTCA-----GTCAT---------------------------------------------CTGGCTCAG------ 1181
Query 1404 TGACAAGCAACAGTTTCTCATTCTTCGCCTGGAAGATCATGCATCCAACGTCAAGTACACCATGCACAAGGTCT 1477
|||| ||.|| |||| |||
Sbjct 1182 ---------------TCTC-----TCCCC----AGAT---------------AAG------------------- 1197
Query 1478 TCCAGTTTCTGAACCTAGGGCCCTTAAGTGAGAAGCAGGAGGCTTTGATGACCAAGAGCCCCGCATCCAATGCA 1551
Sbjct 1198 -------------------------------------------------------------------------- 1197
Query 1552 CGGCGTCCCGAGGACCGGAACCTGGGGCCCATGTGGCCCATCACACAGAAGATTCTGCGGGATTTCTACAGGCC 1625
Sbjct 1198 -------------------------------------------------------------------------- 1197
Query 1626 CTTCAACGCTAGGCTGGCGCAGGTCCTCGCGGATGAGGCGTTTGCGTGGAAGACGACG 1683
Sbjct 1198 ---------------------------------------------------------- 1197
