Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03298
- Subject:
- NR_158960.1
- Aligned Length:
- 2449
- Identities:
- 703
- Gaps:
- 1735
Alignment
Query 1 -------------------------------------ATGGCGCTTGTCCCCTGCCAGGTGCTGCGGATGGCAA 37
|||||||||||||||||||||||||||||||||||||
Sbjct 1 CTCCTTGCCGCCCAGCCGGTCCAGGCCTCTGGCGAACATGGCGCTTGTCCCCTGCCAGGTGCTGCGGATGGCAA 74
Query 38 TCCTGCTGTCTTACTGCTCTATCCTGTGTAACTACAAGGCCATCGAAATGCCCTCACACCAGACCTACGGAGGG 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCCTGCTGTCTTACTGCTCTATCCTGTGTAACTACAAGGCCATCGAAATGCCCTCACACCAGACCTACGGAGGG 148
Query 112 AGCTGGAAATTCCTGACGTTCATTGATCTGGTTATCCAGGCTGTCTTTTTTGGCATCTGTGTGCTGACTGATCT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGCTGGAAATTCCTGACGTTCATTGATCTGGTTATCCAGGCTGTCTTTTTTGGCATCTGTGTGCTGACTGATCT 222
Query 186 TTCCAGTCTTCTGACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAGAAGCTCATCTCTCTCCGGG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTCCAGTCTTCTGACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAGAAGCTCATCTCTCTCCGGG 296
Query 260 ACTGGATGTTAGCTGTGTTGGCCTTTCCTGTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATTTATGCCTAT 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACTGGATGTTAGCTGTGTTGGCCTTTCCTGTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATTTATGCCTAT 370
Query 334 GACAGAGAGATGATATACCCGAAGCTGCTGGATAATTTTATCCCAGGGTGGCTGAATCACGGAATGCACACGAC 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GACAGAGAGATGATATACCCGAAGCTGCTGGATAATTTTATCCCAGGGTGGCTGAATCACGGAATGCACACGAC 444
Query 408 GGTTCTGCCCTTTATATTAATCGAGATGAGGACATCGCACCATCAGTATCCCAGCAGGAGCAGCGGACTTACCG 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGTTCTGCCCTTTATATTAATCGAGATGAGGACATCGCACCATCAGTATCCCAGCAGGAGCAGCGGACTTACCG 518
Query 482 CCATATGTACCTTCTCTGTTGGCTATATATTATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTGGGTGTAC 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCATATGTACCTTCTCTGTTGGCTATATATTATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTGGGTGTAC 592
Query 556 CCTTTCCTGGAACACATTGGCCCAGGAGCCAGAATCATCTTCTTTGGGTCTACAACCATCTTAATGAACTTCCT 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CCTTTCCTGGAACACATTGGCCCAGGAGCCAGAATCATCTTCTTTGGGTCTACAACCATCTTAATGAACTTCCT 666
Query 630 GTACCTGCTGGGAGAAGTTCTGAACAACTATATCTGGGATACACAGAAAA------------------------ 679
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GTACCTGCTGGGAGAAGTTCTGAACAACTATATCTGGGATACACAGAAAAAGCCTCCATCTTGGCAAGGCACGT 740
Query 680 ----GTATGGAAGAAGAGAAAGA-------AAAGCCT----------------AAATTGGAA------------ 714
.|||..|||..|.|.||.| ||||..| ||||||.||
Sbjct 741 AATCTTATCCAAGCTGTGCAAAACCTGTCCAAAGTGTATGTACAATAACATAAAAATTGAAAGGTGGAAAAAGC 814
Query 715 -------------------------------------------------------------------------- 714
Sbjct 815 GCCAGCACAGACATGTAGTGATTGAGTCCTGCATGAAAATACATCCAAAGGCAAGATGGTTTGGAGATTTTAGG 888
Query 715 -------------------------------------------------------------------------- 714
Sbjct 889 AAGCCCTGGCTCTTTCCTCTGACACAATCACAGCATTCTAGACATCCCCAGTAAATGGACTCTGTGACACAGAC 962
Query 715 -------------------------------------------------------------------------- 714
Sbjct 963 ATTGAGCACCCTGCTTTGTGCCAGACACCCTGCCAGGAGCTCAATGGAATCAGACAAATAACGCACAGTATGGA 1036
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1037 AGAAGAGAAAGAAAAGCCTAAATTGGAATGAGATCCAAGTCTAAACGCAAGAGCTAGATTGAGCCGCCATTGAA 1110
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1111 GACTCCTTCCCCTCGGGCATTGGCAGTGGGGGAGAAAAGGCTTCAAAGGAACTTGGTGGCATCAGCACCCCCCT 1184
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1185 CCCCCAATGAGGACACCTTTTATATATAAATATGTATAAACATAGAATACAGTTGTTTCCAAAAGAACTCACCC 1258
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1259 TCACTGTGTGTTAAAGAATTCTTCCCAAAGTCATTACTGATAATAACATTTTTTCCTTTTCTAGTTTTAAAACC 1332
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1333 AGAATTGGACCTTGGATTTTTATTTTGGCAATTGTAACTCCATCTAATCAAGAAAGAATAAAAGTTTATTGCAC 1406
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1407 TTCTTTTTGAGAAATATGTTAAAGTCAAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGT 1480
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1481 GGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGGGAAGGGGACAGATGTTTCTCATTGCATAATGT 1554
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1555 CACAGTTGCCTCAAATGAGCACCATTTGTAATAATGATGTCAATTTCATGAAAAGCCTGAGTGTATTGCATCTC 1628
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1629 TTGATTTAATCATGTGAAACTTTTCCTAGATGCAAATGCTGACTAATAAAGACAAAGCCACCCTGAACCTGACG 1702
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1703 TCTGCATTGTGCATCTCAAAATCCTAACAGCATTAGTATCTCCTTTTCATTTTTATTACCTGTTGAAAATGGGT 1776
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1777 TTACTGAACCTGGTTCTTTCCTATAATTTTTGGATTTTAAAAAATGTGAATCTTTTTGATAACTCCAAAACAAA 1850
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1851 TTTTTTTTTTCTTTTTTTCCAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTACAGTGGCGTGATCTCAGCT 1924
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1925 CACGGCAAGCTCCGCTTCCCGGGTTCATGCCATTCTCCTGCCTTCTCAGCCTCCCGAGTAGCTGGGACTACAGG 1998
Query 715 -------------------------------------------------------------------------- 714
Sbjct 1999 CGCCTGCCACACGCCCGGCTTATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCTTGTTAGCCAGGATGGTC 2072
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2073 TCGATCTCCTGACCTTGTGATCCACACGCCTCGGCCTCCCAAAGTGCTGGGATTACAGACATGAACCACCGCGC 2146
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2147 CCAGCCACAAAATTGTTTTTAAAAAAACTATTTTACAAAATCTTTGACCGTAATTATTTTTAAGATGAAAAATA 2220
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2221 TGTTATATAAATTATAAAATGTTACTTAACACAAATATAAGTATTGATTGCCCAATGTTGAGAGAGATCAACAA 2294
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2295 ATGATATAAAACCATTCACTCCAAAATTATAATTACATTTTAAAATTAAAAAATGAAAAGCATTAAACTTTTTA 2368
Query 715 -------------------------------------------------------------------------- 714
Sbjct 2369 ATTTGAAAAAAATTTAAACTCAAAAAGTTAATTTAAAATTAGTTACATTTAAATGTAATTAAATGCTAAAAATC 2442
Query 715 ------- 714
Sbjct 2443 TCTCTTC 2449
