Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03317
Subject:
NR_024598.2
Aligned Length:
965
Identities:
461
Gaps:
469

Alignment

Query   1  ATGT-----------TTGGCTGCTTGGTGGCGGGGAGGCTGGTGCAAACAGCTGCACAGCAAGT-------GGC  56
             ||           |.||||||||          |||        ||.||..|..|||  |||       |||
Sbjct   1  --GTTGCCTGAGCAGTGGGCTGCTT----------AGG--------AAGAGAAGGTCAG--AGTTCGCGGGGGC  52

Query  57  AGAGGATAAATTTGTTTTTGACTTAC--CTG----ATTATGAAAGTATCAACCATGTTGTGGTTTTTATGCTGG  124
           |||||   .|||         |||.|  |||    |.|           .||.||||.||||     |.|  ||
Sbjct  53  AGAGG---CATT---------CTTGCCGCTGGCCCAGT-----------CACTATGTAGTGG-----AGG--GG  96

Query 125  GA---ACAATCCC---ATTTCCTGAGGGAATGGGAGGATCT--GTCT--ACTTTTCTTATCCTGATTCAAATGG  188
           .|   ||..||||   |.|||         |||.|||.|||  ||||  |||                      
Sbjct  97  CAGACACCCTCCCGCAAATTC---------TGGAAGGTTCTTAGTCTCGACT----------------------  139

Query 189  AATGCCAGTATGGC-----AACTCCTA------GGATT--TGTCAC--------GAATGGGAAGCCAAGTGCCA  241
            |.|.|||||  ||     .|||||||      ||.||  .|||||        |||.||  |||    ||||.
Sbjct 140  -AGGGCAGTA--GCCCCAGGACTCCTAGTCGCCGGCTTCAGGTCACTGCCGGCTGAACGG--AGC----TGCCG  204

Query 242  TCTTCAAAATTTCAGG--TCTT---------AAATCTGGAGAAGGAAGCCAACATCCTTTTGGAGCCATGAATA  304
           ||..|   ||.|..||  .|||         .|..|||||||||||||||||||||||||||||||||||||||
Sbjct 205  TCGCC---ATGTTTGGCTGCTTGGTGGCGGGGAGGCTGGAGAAGGAAGCCAACATCCTTTTGGAGCCATGAATA  275

Query 305  TTGTCCGAACTCCATCTGTTGCTCAGATTGGAATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTCCT  378
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276  TTGTCCGAACTCCATCTGTTGCTCAGATTGGAATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTCCT  349

Query 379  GTAGGTAATGCTGCTGTATCCTCAGTTGACTCATTCACTCAGTTCACACAAAAGATGTTGGACAATTTCTACAA  452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 350  GTAGGTAATGCTGCTGTATCCTCAGTTGACTCATTCACTCAGTTCACACAAAAGATGTTGGACAATTTCTACAA  423

Query 453  TTTTGCTTCATCATTTGCTGTCTCTCAGGCCCAGATGACACCAAGCCCATCTGAAATGTTCATTCCGGCAAATG  526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 424  TTTTGCTTCATCATTTGCTGTCTCTCAGGCCCAGATGACACCAAGCCCATCTGAAATGTTCATTCCGGCAAATG  497

Query 527  TGGTTCTGAAATGGTATGAAAACTTTCAAAGACGACTAGCACAGAACCCTCTCTTTTGGAAAACA---------  591
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct 498  TGGTTCTGAAATGGTATGAAAACTTTCAAAGACGACTAGCACAGAACCCTCTCTTTTGGAAAACATAATTTGAA  571

Query 592  --------------------------------------------------------------------------  591
                                                                                     
Sbjct 572  TAAAATAATTTTTAATGGATTCTGAAATTTGTCATGTTTTGAAGATAACTGACTCCATCTAAAAGTATGAGGTC  645

Query 592  --------------------------------------------------------------------------  591
                                                                                     
Sbjct 646  AAAGGATCACGAAACCTAAGTTTAAAAACTGCTTAGAGACTGAAGCTTAATTAAAAATCTTTATTAAAAATTAA  719

Query 592  --------------------------------------------------------------------------  591
                                                                                     
Sbjct 720  AAACATTGAAAAATGAAAATATGTTCATCATTAAAGACTTTTTTCCCCTTAAGCTTAAAATACCATTCAAAGGC  793

Query 592  --------------------------------------------------------------------------  591
                                                                                     
Sbjct 794  AAGACATTTTGTTTTGGCTATGATTCATTTTTTTTACTTAAAAATAAAACCTATACCAAACAGTAGTGTGCCAA  867

Query 592  ---  591
              
Sbjct 868  GTA  870