Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_03317
• Subject: XR_949963.3
• Aligned Length: 1201
• Identities: 591
• Gaps: 610

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTGCCTGAGCAGTGGGCTGCTTAGGAAGAGAAGGTCAGAGTTCGCGGGGGCAGAGGCATTCTTGCCGCTGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGTCACTATGTAGTGGAGGGGCAGACACCCTCCCGCAAATTCTGGAAGGTTCTTAGTCTCGACTAGGGCAGTA  148

Query    1  -------------------------------------------------------------ATGTTTGGCTGCT  13
                                                                         |||||||||||||
Sbjct  149  GCCCCAGGACTCCTAGTCGCCGGCTTCAGGTCACTGCCGGCTGAACGGAGCTGCCGTCGCCATGTTTGGCTGCT  222

Query   14  TGGTGGCGGGGAGGCTGGTGCAAACAGCTGCACAGCAAGTGGCAGAGGATAAATTTGTTTTTGACTTACCTGAT  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGGTGGCGGGGAGGCTGGTGCAAACAGCTGCACAGCAAGTGGCAGAGGATAAATTTGTTTTTGACTTACCTGAT  296

Query   88  TATGAAAGTATCAACCATGTTGTGGTTTTTATGCTGGGAACAATCCCATTTCCTGAGGGAATGGGAGGATCTGT  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TATGAAAGTATCAACCATGTTGTGGTTTTTATGCTGGGAACAATCCCATTTCCTGAGGGAATGGGAGGATCTGT  370

Query  162  CTACTTTTCTTATCCTGATTCAAATGGAATGCCAGTATGGCAACTCCTAGGATTTGTCACGAATGGGAAGCCAA  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTACTTTTCTTATCCTGATTCAAATGGAATGCCAGTATGGCAACTCCTAGGATTTGTCACGAATGGGAAGCCAA  444

Query  236  GTGCCATCTTCAAAATTTCAGGTCTTAAATCTGGAGAAGGAAGCCAACATCCTTTTGGAGCCATGAATATTGTC  309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTGCCATCTTCAAAATTTCAGGTCTTAAATCTGGAGAAGGAAGCCAACATCCTTTTGGAGCCATGAATATTGTC  518

Query  310  CGAACTCCATCTGTTGCTCAGATTGGAATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTCCTGTAGG  383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGAACTCCATCTGTTGCTCAGATTGGAATTTCAGTGGAATTATTAGACAGTATGGCTCAGCAGACTCCTGTAGG  592

Query  384  TAATGCTGCTGTATCCTCAGTTGACTCATTCACTCAGTTCACACAAAAGATGTTGGACAATTTCTACAATTTTG  457
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TAATGCTGCTGTATCCTCAGTTGACTCATTCACTCAGTTCACACAAAAGATGTTGGACAATTTCTACAATTTTG  666

Query  458  CTTCATCATTTGCTGTCTCTCAGGCCCAGATGACACCAAGCCCATCTGAAATGTTCATTCCGGCAAATGTGGTT  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CTTCATCATTTGCTGTCTCTCAGGCCCAGATGACACCAAGCCCATCTGAAATGTTCATTCCGGCAAATGTGGTT  740

Query  532  CTGAAAT-------------------------------------------------------------------  538
            |||||||                                                                   
Sbjct  741  CTGAAATGATATTTCTTTTCACTTTGAGTATCCTAGAGATGGGAGGATGCCTAGGAAGAGTTTGTTGAGAAGTG  814

Query  539  --------------------------------------GGTATGAAAACTTTCAAAGACGACTAGCACAGAACC  574
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct  815  GTACCATGGTGTAGCATGGAGAGCATTGGAATGCACTAGGTATGAAAACTTTCAAAGACGACTAGCACAGAACC  888

Query  575  CTCTCTTTTGGAAAACA---------------------------------------------------------  591
            |||||||||||||||||                                                         
Sbjct  889  CTCTCTTTTGGAAAACATAATTTGAATAAAATAATTTTTAATGGATTCTGAAATTTGTCATGTTTTGAAGATAA  962

Query  592  --------------------------------------------------------------------------  591
                                                                                      
Sbjct  963  CTGACTCCATCTAAAAGTATGAGGTCAAAGGATCACGAAACCTAAGTTTAAAAACTGCTTAGAGACTGAAGCTT  1036

Query  592  --------------------------------------------------------------------------  591
                                                                                      
Sbjct 1037  AATTAAAAATCTTTATTAAAAATTAAAAACATTGAAAAATGAAAATATGTTCATCATTAAAGACTTTTTTCCCC  1110

Query  592  --------------------------------------------------------------------------  591
                                                                                      
Sbjct 1111  TTAAGCTTAAAATACCATTCAAAGGCAAGACATTTTGTTTTGGCTATGATTCATTTTTTTTACTTAAAAATAAA  1184

Query  592  -----------------  591
                             
Sbjct 1185  ACCTATACCAAACAGTA  1201