Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03330
- Subject:
- NR_149717.1
- Aligned Length:
- 2035
- Identities:
- 505
- Gaps:
- 1456
Alignment
Query 1 ATGAATTCAGGAAGGCCTGAGACCATGGAAAACTTGCCTGCTCTC--------------------TACACTATT 54
|| |.||.||.|.|||.| |.||
Sbjct 1 --------------------------GG--AGCTGGCGTTCTCCCCCGCCCCCTCGGGCGCGCAGTGCA----- 41
Query 55 TTC--------CAAGGAG------AGGTT-----------GCTATGGTGACAGACTATGGGGCCTTTATCAAAA 103
|| .||.||| ||||| |||||| |.|.||| |.|| .
Sbjct 42 -TCGTGGGTGAGAACGAGCGGAGCAGGTTTGGCGTTCCTAGCTATG----------AAGCGGC---TGTC---C 98
Query 104 TCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCATATGTCATCCTGTCGGGTGGATAAGCCCTCTGAG 177
|.|.|||| .||||.||...|||||||||||||||||||.|||||.||||||||.|||||||||||.||||||
Sbjct 99 TGCTAGGC--GCGGACGCGGAGTCTGGTCCATCGAACTCACATGTCGTCCTGTCGAGTGGATAAGCCTTCTGAG 170
Query 178 ATAGTAGATGTTGGAGATAAAGTGTGGGTGAAGCTTATTGGCCGAGAGATGAAAAATGATAGAATAAAAGTATC 251
|||||||||||||||||.|||||||||||||||||.||||||||||||
Sbjct 171 ATAGTAGATGTTGGAGACAAAGTGTGGGTGAAGCTGATTGGCCGAGAG-------------------------- 218
Query 252 CCTCTCCATGAAGGTTGTCAATCAAGGGACTGGGAAAGACCTTGATCCCAACAATGTTATCATTGAGCAAGAAG 325
||||||||
Sbjct 219 ------------------------------------------------------------------GCAAGAAG 226
Query 326 AGAGGCGGAGGCGATCCTTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCTGTCTTGAACACTACCTGC 399
|||||||.||.||.|||||||||||||||||||||||||||||||||||||||||.|||.|||||||.||||||
Sbjct 227 AGAGGCGCAGACGGTCCTTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCCGTCCTGAACACGACCTGC 300
Query 400 AAGAAGTGTGGCTGTAAAGGCCACTTTGCAAAAGATTGTTTCATGCAACCAGGTGGGACTAAATACTCTCTGAT 473
||||||||||||||.||||||||||||||.||.||.|||||||||||.||||||||.||.||.||.||||||||
Sbjct 301 AAGAAGTGTGGCTGCAAAGGCCACTTTGCCAAGGACTGTTTCATGCAGCCAGGTGGAACCAAGTATTCTCTGAT 374
Query 474 ACCTGATGAGGAAGAGGAAAAGGAAGAGGCAAAGTCAGCAGAGTTTGAGAAGCCTGACCCTACAAGGAATCCTT 547
.|||||.||||||||||||||.||.|||||||||.|||.||...|||||||||||||.||.||.|.||||.|||
Sbjct 375 CCCTGAAGAGGAAGAGGAAAAAGAGGAGGCAAAGGCAGAAGGACTTGAGAAGCCTGATCCCACGAAGAATTCTT 448
Query 548 CTAGAAAAAGAAAGAAGGAGAAGAAGAAAAAGAAACATAGAGATAGGAAGTCATCTGACTCTGACAGCTCAGAC 621
|.||.||.|||||||||||.|||||||||||||||||||||||.||||||||||||||||.|||.|||||.|||
Sbjct 449 CCAGGAAGAGAAAGAAGGAAAAGAAGAAAAAGAAACATAGAGACAGGAAGTCATCTGACTGTGATAGCTCTGAC 522
Query 622 TCTGAGAGTGATACAGGCAAGAGGGCAAGGCACACATCAAAAGACAGCAAGGCAGCAAAGAAGAAGAAAAAGAA 695
|||||||||||.||.|||||||.|||.|||||..|||||||||||||||||||..|.||||||||.||.|||||
Sbjct 523 TCTGAGAGTGACACGGGCAAGAAGGCGAGGCATTCATCAAAAGACAGCAAGGCCACCAAGAAGAAAAAGAAGAA 596
Query 696 GAAGAAGCACAAGAAGAAGCACAAGGAG---------------------------------------------- 723
|||||||||||||||||||||||||||.
Sbjct 597 GAAGAAGCACAAGAAGAAGCACAAGGAATGAGGATGGAACAGGCCGCGGCAGCCCTGACTCCTGCAAAGACTCA 670
Query 724 -------------------------------------------------------------------------- 723
Sbjct 671 CTAGTGAGAGTGTGGCCTGCCTCCTACCCAGACTTGTCCCCATGGTCTCAGATGGCTTCTCCCCCTGCAGCAAG 744
Query 724 -------------------------------------------------------------------------- 723
Sbjct 745 CAGATTGGGGCCCCACAGGGCCCCTCCCAACATGATTTTCCCTTGTTGCTCCTGACCCTTTGCAAGCGACCCCT 818
Query 724 -------------------------------------------------------------------------- 723
Sbjct 819 GCAGCCATTGCATTCATGCGCTCAGTGTCTTCATTTCAGCAGAAGGTTCTAGTCCCAACCGGCTGCCACTGCCC 892
Query 724 -------------------------------------------------------------------------- 723
Sbjct 893 GAGCTGGAGTCCTCTGCAGGAGTCCATGCTGGAGCCCCGGGTGCTGCTGTGGAGGGGAGCCTGGCCGTGAGAGA 966
Query 724 -------------------------------------------------------------------------- 723
Sbjct 967 GAGAGCAGCCCCAACCTGCCTGCTGTCTGCGGTGGCTGTGGGTGGACTCTGCGGCCTCCATCCCCTCAGCCAGG 1040
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1041 GCCTGTACTCCAGTGACTGCTGAACCAGAGATTTGCAGCCACGGTCATTGCTCTGCTTCCTGTCTGTCACAGTG 1114
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1115 TGAGTGACTGGTTCCATTTCAAGCCTCTGCTTAAACTCCTGGCATAAATGGAAATGTGTTTGGTTTTAAACTTT 1188
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1189 CCAAAAAGGCTTTATTCCTATAATCCTTCCTGGGCGACTTACAGACTTAACACATTAGTTCACAGAAAACACTT 1262
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1263 ACTATGTTATCCAAGACCCTGGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGTCACAGCTTT 1336
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1337 CTTGAGATTACTCATAAACCTTCTCTTCCATAGTGATGACCGCTTTCCCTTGTATTTGTAACCCTGGGGACTTG 1410
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1411 CTGGGCATGAGTGGGCGACTCTTAGCAGTCACCTCCCACCACAGTTGTTCACACCTGGACCTTGATGTCCTGAG 1484
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1485 CCTGTACTCTAGAGAGAGGGTGACCACAGCACACCATACAGCAAATCCAGGAATGTCTGTGCAGGATGAATGTG 1558
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1559 AAATAGCCACACAGTGACAGCCAGCTGCTCTGCCATGGGCAGGCCAGTGTAAGGGCTTGCATAGATGCTAGAAT 1632
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1633 GACAGCTAGCTTCTCTGAGCCTTGGCAGGTCAGTGTAAGGGTATTACATAGGTGCTACTGTTCCCTAACTGAGC 1706
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1707 CTTGAGCCTGTCCACTCGGCTCCTTGACAGTGCTGCTTCCCAGGTGACCTATAGGCCTTCATTTCAACCTGACA 1780
Query 724 -------------------------------------------------------------------------- 723
Sbjct 1781 CACAGGAAAGGAGGACCAAAGACAGACAACTGGGTGGCCTTGGTTCTGCTTTATTGACCTTGGAGCACCCTTTG 1854
Query 724 ------------------------------------- 723
Sbjct 1855 GATACAGTTTTAAAAAATAAACCACATACATAGTAGG 1891
