Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03356
- Subject:
- NR_036454.2
- Aligned Length:
- 3098
- Identities:
- 453
- Gaps:
- 2633
Alignment
Query 1 ATGGGGCTGTTTGGAAAGACCCAGGAGAAGCCGCCCAAAGAACTGGTCAATGAGTGGTCATTGAAGATAAGAAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGAAATGAGAGTTGTTGACAGGCAAATAAGGGATATCCAAAGAGAAGAAGAAAAAGTGAAACGATCTGTGAAAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ATGCT--------GCCAAGAAGGG------CCAGAAGGATG-------TCTGCATAGTTCTGGCCAAGGAGA-- 199
|| || ||| ||||..||.|| .|||| ||||.|..||.||
Sbjct 1 ---CTCCTTTTCCGC------GGGCCCCGCCCAGGCGGCTGCCCGTGACCTGC------CTGGGCGCGGGGAAC 59
Query 200 TGATCAGGTCAA---GGAAGGCTGTGAGCAAGCTGTATGCATCCAAAGCACACATGAAC----TCAGTGC-TCA 265
||| || ||||| |.||||| || |||||.| |||
Sbjct 60 TGA-------AAGCCGGAAG-----GGGCAAG-------------------------ACGGGTTCAGTTCGTCA 96
Query 266 TGGGGATG------AAGAACCAG------------------CTCGCGGTCTTGCGAGTGGCTGGTTCCCTGCAG 315
|||||.|| ||||.|||| || ||||||||||||||||||||||||||||||
Sbjct 97 TGGGGCTGTTTGGAAAGACCCAGGAGAAGCCGCCCAAAGAACT-GCGGTCTTGCGAGTGGCTGGTTCCCTGCAG 169
Query 316 AAGAGCACAGAAGTGATGAAGGCCATGCAAAGTCTTGTGAAGATTCCAGAGATTCAGGCCACCATGAGGGAGTT 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 170 AAGAGCACAGAAGTGATGAAGGCCATGCAAAGTCTTGTGAAGATTCCAGAGATTCAGGCCACCATGAGGGAGTT 243
Query 390 GTCCAAAGAAATGATGAAGGCTGGGATCATAGAGGAGATGTTAGAGGACACTTTTGAAAGCATGGACGATCAGG 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 GTCCAAAGAAATGATGAAGGCTGGGATCATAGAGGAGATGTTAGAGGACACTTTTGAAAGCATGGACGATCAGG 317
Query 464 AAGAAATGGAGGAAGAAGCAGAAATGGAAATTGACAGAATTCTCTTTGAAATTACAGCAGGGGCCTTGGGCAAA 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 318 AAGAAATGGAGGAAGAAGCAGAAATGGAAATTGACAGAATTCTCTTTGAAATTACAGCAGGGGCCTTGGGCAAA 391
Query 538 GCACCCAGTAAAGTGACTGATGCCCTTCCAGAGCCAGAACCTCCAGGAGCGATGGCTGCCTCAGAGGATGAGGA 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 392 GCACCCAGTAAAGTGACTGATGCCCTTCCAGAGCCAGAACCTCCAGGAGCGATGGCTGCCTCAGAGGATGAGGA 465
Query 612 GGAGGAGGAAGAGGCTCTGGAGGCCATGCAGTCCCGGCTGGCCACACTCCGCAGC------------------- 666
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 466 GGAGGAGGAAGAGGCTCTGGAGGCCATGCAGTCCCGGCTGGCCACACTCCGCAGCTAGGGGCTGCCTACCCCGC 539
Query 667 -------------------------------------------------------------------------- 666
Sbjct 540 TGGGTGTGCACACACTCCTCTCAAGAGCTGCCATTTTATGTGTCTCTTGCACTACACCTCTGTTGTGAGGACTA 613
Query 667 -------------------------------------------------------------------------- 666
Sbjct 614 CCATTTTGGAGAAGGTTCTGTTTGTCTCTTTTCATTCTCTGCCCAGGTTTTGGGATCGCAAAGGGATTGTTCTT 687
Query 667 -------------------------------------------------------------------------- 666
Sbjct 688 ATAAAAGTGGCATAAATAAATGCATCATTTTTAGGAGTATAGACAGATATATCTTATTGTGGGGAGGGGAAAGA 761
Query 667 -------------------------------------------------------------------------- 666
Sbjct 762 AATCCATCTGCTCATGAAGCACTTCTGAAAATATAGGTGATTGCCTGAATGTCGAAGACTCTACTTTTGTCTAT 835
Query 667 -------------------------------------------------------------------------- 666
Sbjct 836 AAAACACTATATAAATGAATTTTAATAAATTTTTGCTTTAGCACTTGGCCCCATTGTAGATTGCCCTGTGCAGT 909
Query 667 -------------------------------------------------------------------------- 666
Sbjct 910 AAACTTTCAAGGTGTCGGCTGCCCCAGATTGCTTCATTTGCTGGGTGTGGAAAGAGTTGCTATGGCCAGGCATA 983
Query 667 -------------------------------------------------------------------------- 666
Sbjct 984 TGGGATTTGGAAGCTCAGCAGAAGTGACTTCTGCTCTGTGGTTGCTGCTCCCCGGCTTTCACAGACATGGTATG 1057
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1058 GCAGCCATTCTTTTATCTATTTAACCAAGAGGATGCTGGGGAATTGTGCTGCTTGTCCTGTTGGCTGGTGGCTG 1131
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1132 CATTATGTCCTGGGGTGTGCATGTGGGTCTATTTAGAGCTTCTGTCCCTTCCTTCCCATTGCAAGTTGCACCCA 1205
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1206 GATGAGACAGCTGTAGTACTAGGTCTCTTTCACCTCTCATTGCCTGTCCCTGCTTCGAGCTGGTTGTCTTGTGC 1279
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1280 GTGGGACATGGGCCTTCCTATCTGTGTTTTCTCAAAGTCAGGAGCTGACCAGGAGCACACTAAGGTGTGGTCAT 1353
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1354 GCATCATAACCAACATTCACTCATCTGGGACATTCTTAAGATACATTTATAAATCATTTCAGCAGTAGTACTTT 1427
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1428 GTATGTGTTGAGAGTTTACAGAGCTCTTTGACATACGCGATCTTAGTCTTTACAAATAAGGAAAACAGCTCAGT 1501
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1502 TTGGGAAGTATCAGAGATGGGATTCAAACCCAGATCCTCTGGTCCAAGTTGTATGTGCACTGAACTAATCAGGC 1575
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1576 AGGAAAAAAGCCCAGCCACTGTCTCACAGATTGTTTTTTGTATATTGTAGCAAAATCCTGAAACAATGGGGTCC 1649
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1650 TTCCAGTCTCATCATACAAAATGGCAATCTTGGCTGGGTGCGGTGGTTCATGCCTATAATCCCAGTGCTTTACA 1723
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1724 AGGCTGAGGCAGGAGGCTCTCTTGAGAATAGGAGTTCAAGACCAGCCTGGGCAACATAGCAAGATCCTGTCTCT 1797
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1798 CCAAAAAAAAAAAAAAAAAAAAAAAAAAATTTCATTTTTGAGTCCAGAGGACCCTCCTATTACTCTTGATTTCA 1871
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1872 TCTTCAGAGTGTAGTTAAAAAATTATTTTAAATAATTATTTTTTTAAATCAGTTGTAGGTTCACAGCAAAAGTG 1945
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1946 GACAAAAAGAAATTTCTCATATATCCCCTGCCCTCACACATGCATAGCCTCCCACCACTATCAGTATCCCACAC 2019
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2020 CAGAGTGGTACATTTGTTACAATCAATAAACCTCCATTGACACATCATTATCACCCAAAGTCCATAGTTTACAT 2093
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2094 GAAGATTCACTCTGGTGTTGTACATTGTATGGGCTTAGACAAATGTATGATGATATCTACAATTATAGAATCAT 2167
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2168 ACAGAATAGTTTCACTGCCCTAAAACTTCTCTATGCTTCACCTGTTCATCCCTTTCTTCCCTAATCCCCTGGCA 2241
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2242 ACCACTTTAAAAAAAAAATTAGGTTCAGGGGGTACATGTGCAGGTAAACTCGTGACAAGGGGGTTTGTTATACA 2315
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2316 GATTATTTAGTGACCCAGGTACTAAGCCTAGTACCCAATAGTTACTTTTCTGGTCCTGTCCCTTTTCCCACCCT 2389
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2390 CCACCCTCAGGTAGGCCCCAGTATGTTATTCCTTTGTGTCCATGTTATTTCACTCCCACTTGTGAGAACATGGA 2463
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2464 ATATTTGGTTTCCTGTTCCTATGTTAGTTTGTTAAGGATAATGGCCTCCAGCCCCATCCATGTTCCTGCAAAGG 2537
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2538 ACATGATCTTTCTTTGGCAACCACTTTTTACTGTCGCCATAGTTCTTCCTTTTCTAGAATGTCATATTGGAATC 2611
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2612 ATATAGTATGTAGCCTTTTCAGACTGGCTTCTTTCACTTAATAATATGCAATTAAGGTTCCTCCATGTCATTTC 2685
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2686 ATGGCTTAATAGTGCATTTATTTTTAGCACTGAATAATACTCCATTGTCTAGATGAATAGTTTATCCATTCACC 2759
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2760 TATTGAAAGACTTCTTGGTGGTTTCCAAGTTTTGGCAATTATGAATAAAGCTGTTGTAAACATCTTTGTGCAGG 2833
Query 667 ---------------------------------------------------------------- 666
Sbjct 2834 TTTTTCTATGGGCATGTTTTTAATTCATTTGAATAAATACCAAGAGCTTCAGTGCTGGATCATA 2897
