Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03449
Subject:
XM_006522192.3
Aligned Length:
1318
Identities:
905
Gaps:
323

Alignment

Query    1  ATGCTGGCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCGTGCCTATGATTGTACCGGCAGCTCCTTACCTTCC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGGACTGATTCAGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGCCCAGT  148
                                                          ||||||||||||||.||.||.||.||||
Sbjct    1  ----------------------------------------------ATGGCTCAGCCTTATGCCTCAGCGCAGT  28

Query  149  TTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACACAGGC  222
            |.||.||.||.|||||.||.|||||.||.||||||||||||||||||||.||.|||||||||||||||||.|||
Sbjct   29  TCGCACCACCCCAGAATGGCATCCCTGCAGAATACACGGCCCCTCATCCTCATCCCGCGCCAGAGTACACCGGC  102

Query  223  CAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCGGCGGA  296
            ||||||||.||.||.||.|||||||||||||||||.|||||..|.|||||||||||.||||||||   .||.||
Sbjct  103  CAGACCACTGTCCCTGACCACACATTAAACCTGTATCCTCCTACACAGACGCACTCGGAGCAGAG---TGCTGA  173

Query  297  CACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCCCCAGA  370
            |||.||.||.|||||||||||.|||||||||||||||||||||||.|||||.|||||.||.|||||||||||||
Sbjct  174  CACCAGTGCGCAGACCGTCTCCGGCACCGCCACACAGACAGATGATGCAGCCCCGACCGACGGCCAGCCCCAGA  247

Query  371  CACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCAGGTTC  444
            |||||||||||||||||||.||||.||||||.||||||||||||||||||||.|||||.|||||.|||.|||||
Sbjct  248  CACAACCTTCTGAAAACACAGAAAGCAAGTCCCAGCCCAAGCGGCTGCATGTGTCCAACATCCCTTTCCGGTTC  321

Query  445  CGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAATGAGCG  518
            ||||||||.||||||.||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  322  CGGGATCCAGACCTCCGACAAATGTTTGGTCAATTTGGTAAAATATTAGATGTTGAAATTATTTTTAATGAGCG  395

Query  519  AGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATTACACG  592
            ||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||.||||
Sbjct  396  AGGCTCCAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCGGATGCGGACAGGGCGAGGGAGAAATTGCACG  469

Query  593  GCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGACCGTC  666
            |.|||||||||||||||||||||||||||||.||||||||.||||||||.||.|||||||||||.|||||.|||
Sbjct  470  GTACCGTGGTAGAGGGCCGTAAAATCGAGGTTAATAATGCGACAGCACGCGTGATGACAAATAAGAAGACTGTC  543

Query  667  AACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCAGGCAC  740
            |||||.||.||.||||||||||||||.||||||||||||||.||.||||||||.|||||.||||||||||||||
Sbjct  544  AACCCCTACACCAATGGCTGGAAATTAAATCCAGTTGTGGGCGCGGTCTACAGCCCCGACTTCTATGCAGGCAC  617

Query  741  GGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATATACTTCTG  814
            |||.|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct  618  GGTGCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGGCCCCAGTTCACTTGTATATACTTCTG  691

Query  815  CAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCCGCGGT  888
            |||||||.||||||||.|||||.||.|||||.||.||.||.||.|||||||||||.|||||.||||||||.|||
Sbjct  692  CAATGCCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGCTCACCTTCGAGGCCGTGGT  765

Query  889  CGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAGTAGTGTATCA  962
            ||||||||||||||||||||||||||.||.||||||||||||||.|||||||||||.|||||.||.||.||.||
Sbjct  766  CGCACCGTGTACAACACCTTCAGGGCTGCAGCGCCCCCGCCCCCAATCCCGGCCTATGGCGGTGTTGTTTACCA  839

Query  963  AGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCTACGCCCAGCC  1025
            .||   ||   |.|||||           |||||        ||||||||||||||.||||||||.||||||||
Sbjct  840  GGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCGTACCGCTATGCCCAGCC  899

Query 1026  TACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTCTTGTA  1099
            .|||||||||||||||||||||||||||||                                            
Sbjct  900  CACCCCTGCCACTGCCGCTGCCTACAGTGA--------------------------------------------  929

Query 1100  ACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCACCTACG  1173
                     ||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct  930  ---------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACACACTTGCTCCAGCCCCCACCTACG  994

Query 1174  GCGTTGGTGCCA--------------------------------------------------------------  1185
            ||||||||||||                                                              
Sbjct  995  GCGTTGGTGCCATGAATGCTTTTGCGCCCTTGACCGATGCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTC  1068

Query 1186  ------------------------------------------------------------  1185
                                                                        
Sbjct 1069  GTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCATAT  1128

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