Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03449
- Subject:
- XM_017023329.2
- Aligned Length:
- 1397
- Identities:
- 1007
- Gaps:
- 370
Alignment
Query 1 ATG----CTGGCGTCTCAAGGAGTTCTCCTGCA-----TCCTTATGGCGTGCCTATGATTGTACCGGCAGC--T 63
||| |||| |||| ||..|||.|||| ..||||..|| |.||| ||||.|.|| .|||| |
Sbjct 1 ATGGAAACTGG----TCAA--AGAACTCATGCAAGTGGAACTTACAGC-TTCCT-TGATCGGAC--TCAGCATT 64
Query 64 C---------------CT----TACCTTCCTG---------GACTGA-----TTCA------------------ 86
| || |||||.|.|| |||.|| ||||
Sbjct 65 CAGATATCAAAGCAGACTGCAATACCTGCGTGGAAATAGAAGACAGAAAGGTTTCAAGACAACAGATGAATTGT 138
Query 87 -----------------GGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGC 143
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 GAAAGAGAGCAGCTAAGGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCTTCGGC 212
Query 144 CCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACA 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 213 CCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGAGTACA 286
Query 218 CAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCG 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 CAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGAGCCCG 360
Query 292 GCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCC 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGCCAGCC 434
Query 366 CCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCA 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 CCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCCCTTCA 508
Query 440 GGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAAT 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 509 GGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAAT 582
Query 514 GAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATT 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 583 GAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATT 656
Query 588 ACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGA 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 ACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAAAAAGA 730
Query 662 CCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCA 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 731 CCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCTATGCA 804
Query 736 GGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTATATAC 809
|
Sbjct 805 G------------------------------------------------------------------------- 805
Query 810 TTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCC 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 --------TGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCC 871
Query 884 GCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAGTAGTG 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.||.
Sbjct 872 GCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGTGTTGTT 945
Query 958 TATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCTACGCC 1020
||.||.|| || |.||||| ||||| |||||||||||||||||||||||||||
Sbjct 946 TACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCATACCGCTACGCC 1005
Query 1021 CAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTC 1094
|||||||||||||||||||||||||||||||||||
Sbjct 1006 CAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGA--------------------------------------- 1040
Query 1095 TTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCAC 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1041 --------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCCCCCAC 1100
Query 1169 CTACGGCGTTGGTGCCA--------------------------------------------------------- 1185
|||||||||||||||||
Sbjct 1101 CTACGGCGTTGGTGCCATGAATGCTTTTGCACCTTTGACTGATGCCAAGACTAGGAGCCATGCTGATGATGTGG 1174
Query 1186 ----------------------------------------------------------------- 1185
Sbjct 1175 GTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCATAC 1239