Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03449
Subject:
XM_024450316.1
Aligned Length:
1206
Identities:
1002
Gaps:
198

Alignment

Query    1  ATGCTGGCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCGTGCCTATG-ATTGTACCG-------GCAGCTCCT  66
                                                         ||| |||||   |       ||||||   
Sbjct    1  ---------------------------------------------ATGAATTGT---GAAAGAGAGCAGCT---  23

Query   67  TACCTTCCTGGACTGATTCA--GGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCT  138
                               |  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   24  -------------------AAGGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCT  78

Query  139  TCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGA  212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   79  TCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGA  152

Query  213  GTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGA  286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  153  GTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGA  226

Query  287  GCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  227  GCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGC  300

Query  361  CAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCC  434
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  CAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCC  374

Query  435  CTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTT  508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  375  CTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTT  448

Query  509  TTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAG  582
            ||||||||||||||||||                                                        
Sbjct  449  TTAATGAGCGAGGCTCAA--------------------------------------------------------  466

Query  583  AAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAA  656
                                                 |||||||||||||||||||||||||||||||||||||
Sbjct  467  -------------------------------------AGGTAAATAATGCCACAGCACGTGTAATGACAAATAA  503

Query  657  AAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCT  730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  504  AAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCT  577

Query  731  ATGCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTA  804
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  578  ATGCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTA  651

Query  805  TATACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCG  878
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  652  TATACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCG  725

Query  879  AGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAG  952
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  726  AGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGTG  799

Query  953  TAGTGTATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCT  1015
            |.||.||.||.||   ||   |.|||||           |||||        ||||||||||||||||||||||
Sbjct  800  TTGTTTACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCATACCGCT  859

Query 1016  ACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAA  1089
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  860  ACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAA  933

Query 1090  ATTTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCC  1163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  934  ATTTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCC  1007

Query 1164  CCCACCTACGGCGTTGGTGCCA  1185
            ||||||||||||||||||||||
Sbjct 1008  CCCACCTACGGCGTTGGTGCCA  1029

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