Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03477
- Subject:
- XM_017315590.1
- Aligned Length:
- 1751
- Identities:
- 744
- Gaps:
- 886
Alignment
Query 1 ATGCCTTCTGCATCCTGTGATACACTACTGGATGACATCGAAGATATCGTGTCTCAGGAAGATTCAAAACCACA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AGATAGGCATTTTGTAAGAAAGGATGTTGTCCCGAAGGTACGAAGGCGAAATACCCAAAAATATTTGCAAGAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 AAGAAAACAGTCCACCAAGTGACAGCACTATTCCAGGCATACAGAAAATTTGGATACGAACATGGGGTTGTTCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CATAATAATTCAGATGGAGAATATATGGCTGGACAGCTAGCTGCTTATGGCTATAAAATTACAGAAAATGCATC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CGATGCAGATTTATGGCTCCTGAACAGTTGCACTGTAAAAAACCCAGCTGAAGACCACTTTAGAAACTCAATTA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AAAAAGCTCAAGAGGAGAACAAGAAAATCGTACTGGCTGGATGCGTTCCTCAAGCCCAGCCTCGCCAGGACTAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CTTAAGGGACTGAGTATCATTGGGGTTCAGCAGATAGATCGTGTGGTAGAAGTTGTGGAGGAGACAATTAAAGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TCACTCTGTGAGACTGCTGGGTCAGAAAAAGGATAATGGAAGGCGGCTTGGGGGAGCACGATTGGATTTGCCGA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGATTAGGAAGAATCCACTGATAGAAATCATTTCCATCAATACCGGGTGTCTCAATGCTTGTACCTACTGCAAA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 ACTAAACACGCCAGAGGAAATTTGGCCAGTTATCCAATTGATGAACTAGTAGATAGAGCCAAACAATCTTTTCA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 AGAGGGTGTTTGTGAGATATGGTTGACCAGTGAAGACACGGGGGCTTATGGCAGAGATATTGGCACCAATCTCC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CCACACTCCTGTGGAAACTGGTTGAAGTGATTCCTGAGGGAGCAATGCTGAGGCTTGGCATGACAAATCCGCCC 888
|||||||||||.||||||||||||||.||.
Sbjct 1 --------------------------------------------ATGCTGAGGCTGGGCATGACAAATCCACCA 30
Query 889 TATATTTTAGAGCATCTGGAGGAAATGGCAAAAATCCTTAATCACCCCAGAGTCTACGCTTTTCTGCACATACC 962
|||||||||||.||||||||||||||||||||||||||.||.||.|||||||||||||||||.||.|||||.||
Sbjct 31 TATATTTTAGAACATCTGGAGGAAATGGCAAAAATCCTCAACCATCCCAGAGTCTACGCTTTCCTCCACATCCC 104
Query 963 AGTCCAGTCTGCCTCCGACAGCGTACTCATGGAAATGAAAAGAGAATACTGTGTGGCTGACTTCAAAAGAGTAG 1036
|||.|||||.|||||.|||||.||.||||||||.|||||.|||||.|||||.|||||.||||||||||||||.|
Sbjct 105 AGTGCAGTCCGCCTCTGACAGTGTGCTCATGGACATGAAGAGAGAGTACTGCGTGGCCGACTTCAAAAGAGTCG 178
Query 1037 TGGATTTTCTGAAAGAGAAAGTTCCTGGAATAACTATTGCTACAGATATTATCTGTGGTTTTCCTGGAGAAACA 1110
||||||||||.||.|||||.||||||||||||||.||||||||.|||||||||||||||||||||||||||||.
Sbjct 179 TGGATTTTCTCAAGGAGAAGGTTCCTGGAATAACGATTGCTACGGATATTATCTGTGGTTTTCCTGGAGAAACC 252
Query 1111 GATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTCCCAAGCCTGTTTATTAACCAATTTTA 1184
|||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||.||.|||||.||.||
Sbjct 253 GATCAGGATTTTCAAGAAACAGTGAAACTTGTTGAAGAGTACAAATTTCCAAGCCTCTTCATCAACCAGTTCTA 326
Query 1185 CCCAAGACCAGGAACTCCTGCTGCAAAAATGGAACAAGTTCCAGCACAAGTGAAAAAGCAAAGGACAAAAGATC 1258
.||||||||.||||||||||||||||||...||.||.|||||||||||.||||||||.||||||||||||||||
Sbjct 327 TCCAAGACCCGGAACTCCTGCTGCAAAAGCCGAGCAGGTTCCAGCACATGTGAAAAAACAAAGGACAAAAGATC 400
Query 1259 TTTCTCGGGTGTTTCATTCTTACAGTCCATATGATCACAAGATTGGTGAAAGACAACAAGTGTTAGTAACAGAA 1332
|||||||||||||||||||.||||.||||||.||||||||||||||.|||||||||||||||.||||.||.|||
Sbjct 401 TTTCTCGGGTGTTTCATTCCTACAATCCATACGATCACAAGATTGGCGAAAGACAACAAGTGCTAGTCACTGAA 474
Query 1333 GAATCTTTTGATTCCAAGTTTTATGTTGCACACAATCAATTCTATGAGCAGGTTTTAGTGCCAAAGAACCCTGC 1406
||.||||||||.|||||||||||||||||.||.||.|.|||||||||||||||||||||.||||||||||||||
Sbjct 475 GAGTCTTTTGACTCCAAGTTTTATGTTGCTCATAACCGATTCTATGAGCAGGTTTTAGTACCAAAGAACCCTGC 548
Query 1407 GTTCATGGGGAAGATGGTTGAAGTGGACATCTATGAATCAGGCAAACATTTTATGAAAGGGCAGCCAGTATCTG 1480
.|||||||||||.|||||||||||.|||||.||.||||||||.||.||.|||.|||||||.|||||||||||.|
Sbjct 549 ATTCATGGGGAAAATGGTTGAAGTCGACATTTACGAATCAGGAAAGCACTTTTTGAAAGGACAGCCAGTATCAG 622
Query 1481 ATGCCAAAGTGTACACGCCCTCCATCAGCAAACCGCTAGCAAAGGGAGAAGTCTCGGGTTTGACAAAGGACTTC 1554
|..|||.||||||.||.||.|||||||||||.||.||.||.||||||||||||||.||||||||||||||.|||
Sbjct 623 AAACCAGAGTGTATACACCATCCATCAGCAAGCCACTGGCCAAGGGAGAAGTCTCAGGTTTGACAAAGGAATTC 696
Query 1555 AGAAATGGGCTTGGGAACCAGC------TGAGTTCAGGATCCCACACCTCTGCTGCATCTCAGTGTGACTCAGC 1622
||||||.||||||||||.||.| ..|.||||| ||||||.|.|||||.|||||..||.|||.||
Sbjct 697 AGAAATAGGCTTGGGAATCATCCAAACGGAACTTCAG------ACACCTGTCCTGCAACTCAGCATGGCTCTGC 764
Query 1623 GAGTTCCAGAATGGTGCTGCCCATG-CCAAGGCTACATCAAGACTGTGCGCTGAGGATGTCCGTGGGCTTGGCT 1695
|..|||||||||||||||||..||| || ||..|.|||||.||.||||.|.||.|....|||.|||||
Sbjct 765 GTATTCCAGAATGGTGCTGCAGATGTCC-------CAGTATGACTGCGCACTGAAGGTGGCTACAGGCCTGGCT 831
Query 1696 CTGCTGGGTCTTCTTTTTGCTTTTTTTGTCAAGGTC------TATAAT- 1737
||.||.|.|| ||.||||||.|||.|.|.||...|| ||.|||
Sbjct 832 CTCCTCGCTC-TCCTTTTGCATTTCTGGCCAGACTCTTTGCTTACAATG 879
