Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03523
- Subject:
- XM_017312931.1
- Aligned Length:
- 1771
- Identities:
- 1101
- Gaps:
- 521
Alignment
Query 1 ATGGACCTAATGAACGGGCAGGCAAGCAGTGTCAATATTGCAGCTACTGCTTCTGAGAAAAGTAGCAGCTCTGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ATCCTTAAGTGACAAAGGCTCTGAATTGAAGAAAAGCTTTGATGCTGTGGTATTCGATGTTCTTAAGGTTACAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGAAGAATATGCGGGTCAGATAACATTAATGGATGTTCCAGTATTTAAAGCTATTCAACCAGATGAGCTTTCA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGTTGTGGATGGAATAAAAAAGAAAAATATAGTTCTGCACCAAATGCAGTTGCCTTCACAAGAAGATTCAATCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGTAAGCTTTTGGGTTGTTAGAGAGATTCTTCATGCTCAAACATTAAAAATTAGAGCAGAAGTTTTGAGCCACT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ATATTAAAACTGCTAAGAAACTGTATGAGCTGAATAACCTTCATGCACTTATGGCAGTGGTTTCTGGCCTACAG 444
|||||.||||||||||||.|||||
Sbjct 1 --------------------------------------------------ATGGCTGTGGTTTCTGGCTTACAG 24
Query 445 AGTGCCCCAATTTTCAGGTTGACTAAAACATGGGCGTTATTAAGTCGAAAAGACAAAACTACCTTTGAAAAATT 518
|||||.||.||||||.||||||||||.||.||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 25 AGTGCGCCGATTTTCCGGTTGACTAAGACGTGGGCGTTATTAAGTCGAAAAGACAAAACTACCTTTGAAAAACT 98
Query 519 AGAATATGTAATGAGTAAAGAAGATAACTACAAAAGACTCAGAGACTATATAAGTAGCTTAAAGATGACACCTT 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||||
Sbjct 99 AGAATATGTAATGAGTAAAGAAGATAACTACAAAAGACTCAGAGACTATATAAGCAGCTTAAAGATGACTCCTT 172
Query 593 GCATTCCCTATTTAGGTATCTATTTGTCAGATTTAACATACATCGATTCAGCATACCCATCAACTGGCAGCATT 666
||||||||||||||||.|||||||||||.||.||.||.|||||.||.||.||.||||||||.||.|||||||||
Sbjct 173 GCATTCCCTATTTAGGCATCTATTTGTCTGACTTGACCTACATTGACTCCGCGTACCCATCCACCGGCAGCATT 246
Query 667 CTAGAAAATGAGCAAAGATCAAATTTAATGAATAATATCCTTCGAATAATTTCTGATTTACAGCAGTCTTGTGA 740
||||||||||||||||||||||||.|.|||||.||.||.||||||||||||||||||||.||||||||.|||||
Sbjct 247 CTAGAAAATGAGCAAAGATCAAATCTGATGAACAACATTCTTCGAATAATTTCTGATTTGCAGCAGTCCTGTGA 320
Query 741 ATATGATATTCCCATGTTGCCTCATGTCCAAAAATATCTCAACTCTGTTCAGTATATAGAAGAACTACAAAAAT 814
|||||||||||||||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.|
Sbjct 321 ATATGATATTCCCATATTGCCTCATGTCCAAAAATACCTGAACTCTGTTCAGTATATAGAAGAACTACAAAAGT 394
Query 815 TTGTGGAAGACGATAATTACAAGCTTTCATTAAAGATAGAACCAGGGACAAGCACCCCACGTTCTGCTGCTTCC 888
|||||||||||||||||||||||||.||.|||||||||||||||||..||||.||.|||||.||.|||||.|||
Sbjct 395 TTGTGGAAGACGATAATTACAAGCTCTCCTTAAAGATAGAACCAGGAGCAAGTACTCCACGCTCGGCTGCCTCC 468
Query 889 AGAGAAGATTTAGTAGGTCCTGAAGTAGGAGCGTCTCCACA--GAGTGGACGAAAA--AGT------------- 945
||.||.||..|||.|||||||||..||||.||.||.||.|| ||| |||.|||.| |||
Sbjct 469 AGGGAGGACCTAGCAGGTCCTGACATAGGCGCCTCACCCCAGGGAG-GGAGGAAGAGTAGTGCTGCTGCTGCTG 541
Query 946 -----GTGGCAGCTGAAGGAGCCTTGCTCCCACAGACACCGCCATCCCCTCGGAATCTGATTCCACATGGACAT 1014
|.|||.||.||.||||||||.||.||||||||.||.||.|||||||||||.||.||||||||.|||||.
Sbjct 542 CCGCCGCGGCTGCCGAGGGAGCCTTACTGCCACAGACGCCACCTTCCCCTCGGAACCTCATTCCACACGGACAC 615
Query 1015 AGGAAGTGCCATAGTTTGGGTTATAATTTCATTCATAAAATGAACACAGCAGAATTTAAGAGTGCAACGTTTCC 1088
|||||||||||.||..|||||||.||||||||||||||.||||||||||||||.||||||||.||||||||.||
Sbjct 616 AGGAAGTGCCACAGCCTGGGTTACAATTTCATTCATAAGATGAACACAGCAGAGTTTAAGAGCGCAACGTTCCC 689
Query 1089 AAATGCAGGACCAAGACATCTGTTAGATGATAGCGTCATGGAGCCCCATGCGCCATCTCGAGGCCAAGCTGAAA 1162
|||.|||||.|||.|.||.|||.|.||||||||.|||||||||||.||.||.||.||.||||||||.|||||.|
Sbjct 690 AAACGCAGGGCCACGGCACCTGCTGGATGATAGTGTCATGGAGCCGCACGCACCGTCGCGAGGCCAGGCTGAGA 763
Query 1163 GTTCTACTCTTTCTAGTGGAATATCAATAGGTAGCAGCGATGGTTCTGAACTAAGTGAAGAGACCTCATGGCCT 1236
|.|||||.|||||.|||||||||||.|||||.|||||.|||||||||||||||||.|||||||||||||||||.
Sbjct 764 GCTCTACACTTTCCAGTGGAATATCCATAGGGAGCAGTGATGGTTCTGAACTAAGCGAAGAGACCTCATGGCCG 837
Query 1237 GCTTTTGAAAGGAACAGATTATACCATTCTCTCGGCCCGGTGACAAGAGTGGCACGAAATGGCTATCGAAGTCA 1310
|||||||||
Sbjct 838 GCTTTTGAA----------------------------------------------------------------- 846
Query 1311 CATGAAGGCCAGCAGTTCTGCAGAATCAGAAGATTTGGCAGTACATTTATATCCAGGAGCTGTTACTATTCAAG 1384
||.|||||.||.||.|||||||||||.||.|||.|.||.||.|||||||||||||||||||
Sbjct 847 -------------AGCTCTGCGGAGTCGGAAGATTTGGCGGTGCATCTGTACCCCGGAGCTGTTACTATTCAAG 907
Query 1385 GTGTTCTCAGGAGAAAAACTTTGTTAAAAGAAGGCAAAAAGCCTACAGTAGCATCTTGGACAAAATATTGGGCA 1458
||||.|||.||||.|||||.|||.|||||||||||||.||.||.||||||||||||||||||||.|||||||||
Sbjct 908 GTGTGCTCCGGAGGAAAACCTTGCTAAAAGAAGGCAAGAAACCCACAGTAGCATCTTGGACAAAGTATTGGGCA 981
Query 1459 GCTTTGTGTGGGACACAGCTTTTTTACTATGCTGCCAAATCTCTAAAGGCTACCGAAAGAAAACATTTCAAATC 1532
||.||||||||.||||||||||||||||||||.|||||||||||.||||||||.||||||||.|||||||||||
Sbjct 982 GCCTTGTGTGGAACACAGCTTTTTTACTATGCCGCCAAATCTCTGAAGGCTACAGAAAGAAAGCATTTCAAATC 1055
Query 1533 AACATCCAATAAGAACGTATCTGTGATAGGATGGATGGTGATGATGGCTGATGACCCTGAACATCCTGATCTCT 1606
|||.||.||||||||.||.||||||.|.||.||||||||||||||||||||.|||||.||.|||||.||.||||
Sbjct 1056 AACGTCAAATAAGAATGTGTCTGTGGTGGGCTGGATGGTGATGATGGCTGACGACCCAGAGCATCCAGACCTCT 1129
Query 1607 TCCTGCTGACTGACTCTGAGAAAGGAAATTCGTACAAGTTTCAAGCTGGCAATAGAATGAATGCAATGTTATGG 1680
|.||||||||||||||.||||||||||||||.|||||||||||||||||||..||.||||||||||||.|.|||
Sbjct 1130 TTCTGCTGACTGACTCCGAGAAAGGAAATTCATACAAGTTTCAAGCTGGCAGCAGGATGAATGCAATGCTGTGG 1203
Query 1681 TTTAAGCATTTGAGTGCAGCCTGCCAAAGTAACAAACAACAGGTTCCTACAAACTTGATGACTTTTGAG 1749
|||||.||.|||||.||.||||||||.||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1204 TTTAAACACTTGAGCGCGGCCTGCCAGAGTAACAAGCAACAGGTTCCTACAAACTTGATGACTTTTGAG 1272
