Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03543
Subject:
XM_011521755.2
Aligned Length:
1410
Identities:
792
Gaps:
618

Alignment

Query    1  ATGTCTAGACTGGGAGCCCTGGGTGGTGCCCGTGCCGGGCTGGGACTGTTGCTGGGTACCGCCGCCGGCCTTGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATTCCTGTGCCTCCTTTACAGCCAGCGATGGAAACGGACCCAGCGTCATGGCCGCAGCCAGAGCCTGCCCAACT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CCCTGGACTATACGCAGACTTCAGATCCCGGACGCCACGTGATGCTCCTGCGGGCTGTCCCAGGTGGGGCTGGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GATGCCTCAGTGCTGCCCAGCCTTCCACGGGAAGGACAGGAGAAGGTGCTGGACCGCCTGGACTTTGTGCTGAC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGCCTTGTGGCGCTGCGGCGGGAGGTGGAGGAGCTGAGAAGCAGCCTGCGAGGGCTTGCGGGGGAGATTGTTG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GGGAGGTCCGATGCCACATGGAAGAGAACCAGAGAGTGGCTCGGCGGCGAAGGTTTCCGTTTGTCCGGGAGAGG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AGTGACTCCACTGGCTCCAGCTCTGTCTACTTCACGGCCTCCTCGGGAGCCACGTTCACAGATGCTGAGAGTGA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  AGGGGGTTACACAACAGCCAATGCGGAGTCTGACAATGAGCGGGACTCTGACAAAGAAAGTGAGGACGGGGAAG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  ATGAAGTGAGCTGTGAGACTGTGAAGATGGGGAGAAAGGATTCTCTTGACTTGGAGGAAGAGGCAGCTTCAGGT  666
                                      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  --------------------------ATGGGGAGAAAGGATTCTCTTGACTTGGAGGAAGAGGCAGCTTCAGGT  48

Query  667  GCCTCCAGTGCCCTGGAGGCTGGAGGTTCCTCAGGCTTGGAGGATGTGCTGCCCCTCCTGCAGCAGGCCGACGA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   49  GCCTCCAGTGCCCTGGAGGCTGGAGGTTCCTCAGGCTTGGAGGATGTGCTGCCCCTCCTGCAGCAGGCCGACGA  122

Query  741  GCTGCACAGGGGTGATGAGCAAGGCAAGCGGGAGGGCTTCCAGCTGCTGCTCAACAACAAGCTGGTGTATGGAA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  123  GCTGCACAGGGGTGATGAGCAAGGCAAGCGGGAGGGCTTCCAGCTGCTGCTCAACAACAAGCTGGTGTATGGAA  196

Query  815  GCCGGCAGGACTTTCTCTGGCGCCTGGCCCGAGCCTACAGTGACATGTGTGAGCTCACTGAGGAGGTGAGCGAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  197  GCCGGCAGGACTTTCTCTGGCGCCTGGCCCGAGCCTACAGTGACATGTGTGAGCTCACTGAGGAGGTGAGCGAG  270

Query  889  AAGAAGTCATATGCCCTAGATGGAAAAGAAGAAGCAGAGGCTGCTCTGGAGAAGGGGGATGAGAGTGCTGACTG  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  271  AAGAAGTCATATGCCCTAGATGGAAAAGAAGAAGCAGAGGCTGCTCTGGAGAAGGGGGATGAGAGTGCTGACTG  344

Query  963  TCACCTGTGGTATGCGGTGCTTTGTGGTCAGCTGGCTGAGCATGAGAGCATCCAGAGGCGCATCCAGAGTGGCT  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  345  TCACCTGTGGTATGCGGTGCTTTGTGGTCAGCTGGCTGAGCATGAGAGCATCCAGAGGCGCATCCAGAGTGGCT  418

Query 1037  TTAGCTTCAAGGAGCATGTGGACAAAGCCATTGCTCTCCAGCCAGAAAACCCCATGGCTCACTTTCTTCTTGGC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  419  TTAGCTTCAAGGAGCATGTGGACAAAGCCATTGCTCTCCAGCCAGAAAACCCCATGGCTCACTTTCTTCTTGGC  492

Query 1111  AGGTGGTGCTATCAGGTCTCTCACCTGAGCTGGCTAGAAAAAAAAACTGCTACAGCCTTGCTTGAAAGCCCTCT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  493  AGGTGGTGCTATCAGGTCTCTCACCTGAGCTGGCTAGAAAAAAAAACTGCTACAGCCTTGCTTGAAAGCCCTCT  566

Query 1185  CAGTGCCACTGTGGAAGATGCCCTCCAGAGCTTCCTAAAGGCTGAAGAACTACAGCCAGGATTTTCCAAAGCAG  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  567  CAGTGCCACTGTGGAAGATGCCCTCCAGAGCTTCCTAAAGGCTGAAGAACTACAGCCAGGATTTTCCAAAGCAG  640

Query 1259  GAAGGGTATATATTTCCAAGTGCTACAGAGAACTAGGGAAAAACTCTGAAGCTAGATGGTGGATGAAGTTGGCC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  641  GAAGGGTATATATTTCCAAGTGCTACAGAGAACTAGGGAAAAACTCTGAAGCTAGATGGTGGATGAAGTTGGCC  714

Query 1333  CTGGAGCTGCCAGATGTCACGAAGGAGGATTTGGCTATCCAGAAGGACCTGGAAGAACTGGAAGTCATTTTACG  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  715  CTGGAGCTGCCAGATGTCACGAAGGAGGATTTGGCTATCCAGAAGGACCTGGAAGAACTGGAAGTCATTTTACG  788

Query 1407  AGAC  1410
            ||||
Sbjct  789  AGAC  792