Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03576
- Subject:
- XR_002957830.1
- Aligned Length:
- 3939
- Identities:
- 1434
- Gaps:
- 2505
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCTCACCGCCGCTTCCGGTCCGCGTGAGGTGCATTCTCGCGCCGGTGGCGAGGTTAGGGCCCGCGTTGCGAC 74
Query 1 -----------------------------------------------ATGGCCACCGACTCGTGGGCCCTGGCG 27
|||||||||||||||||||||||||||
Sbjct 75 GTGGTGCAGCGCATATTTTCACAAGTGGGTCTCCCTTGTCCGGGACTATGGCCACCGACTCGTGGGCCCTGGCG 148
Query 28 GTGGACGAGCAGGAAGCGGCTGTCAAGTCGATGACCAATTTGCAGATCAAGGAAGAGAAAGTCAAAGCAGATAC 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GTGGACGAGCAGGAAGCGGCTGTCAAGTCGATGACCAATTTGCAGATCAAGGAAGAGAAAGTCAAAGCAGATAC 222
Query 102 CAATGGTATTATCAAAACCAGTACCACTGCCGAGAAAACAGATGAAGAGGAGAAAGAGGACAGAGCTGCCCAGT 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAATGGTATTATCAAAACCAGTACCACTGCCGAGAAAACAGATGAAGAGGAGAAAGAGGACAGAGCTGCCCAGT 296
Query 176 CCTTACTCAACAAGCTGATCAGAAGCAACCTTGTTGATAACACAAACCAAGTGGAAGTCCTGCAACGGGATCCA 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCTTACTCAACAAGCTGATCAGAAGCAACCTTGTTGATAACACAAACCAAGTGGAAGTCCTGCAACGGGATCCA 370
Query 250 AACTCCCCTCTGTACTCGGTGAAGTCGTTTGAAGAGCTTCGGCTGAAACCACAGCTTCTCCAGGGAGTCTATGC 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AACTCCCCTCTGTACTCGGTGAAGTCGTTTGAAGAGCTTCGGCTGAAACCACAGCTTCTCCAGGGAGTCTATGC 444
Query 324 CATGGGCTTCAATCGACCCTCCAAGATACAAGAGAACGCATTACCCATGATGCTTGCTGAACCCCCACAGAATC 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CATGGGCTTCAATCGACCCTCCAAGATACAAGAGAACGCATTACCCATGATGCTTGCTGAACCCCCACAGAATC 518
Query 398 TGATTGCCCAGTCTCAGTCTGGCACTGGTAAAACAGCTGCCTTTGTCTTAGCCATGCTCAGCCGAGTGGAGCCA 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGATTGCCCAGTCTCAGTCTGGCACTGGTAAAACAGCTGCCTTTGTCTTAGCCATGCTCAGCCGAGTGGAGCCA 592
Query 472 TCAGACAGATACCCCCAGTGTCTGTGCCTCTCCCCAACATATGAGCTGGCGCTTCAAACAGGAAAAGTGATTGA 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAGACAGATACCCCCAGTGTCTGTGCCTCTCCCCAACATATGAGCTGGCGCTTCAAACAGGAAAAGTGATTGA 666
Query 546 GCAGATGGGCAAATTTTACCCAGAACTGAAGCTTGCCTATGCCGTTCGAGGCAATAAATTGGAAAGAGGCCAGA 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCAGATGGGCAAATTTTACCCAGAACTGAAGCTTGCCTATGCCGTTCGAGGCAATAAATTGGAAAGAGGCCAGA 740
Query 620 AGATCAGTGAGCAGATTGTCATTGGCACCCCTGGGACCGTGCTGGACTGGTGCTCCAAGCTCAAGTTCATTGAT 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGATCAGTGAGCAGATTGTCATTGGCACCCCTGGGACCGTGCTGGACTGGTGCTCCAAGCTCAAGTTCATTGAT 814
Query 694 CCCAAGAAAATCAAGGTGTTTGTTCTGGATGAGGCTGATGTCATGATAGCCACTCAGGGCCACCAAGATCAGAG 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCAAGAAAATCAAGGTGTTTGTTCTGGATGAGGCTGATGTCATGATAGCCACTCAGGGCCACCAAGATCAGAG 888
Query 768 CATCCGCATCCAGAGGATGCTGCCCAGGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTGAAGACTCTGTGT 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CATCCGCATCCAGAGGATGCTGCCCAGGAACTGCCAGATGCTGCTTTTCTCCGCCACCTTTGAAGACTCTGTGT 962
Query 842 GGAAGTTTGCCCAGAAAGTGGTCCCAGACCCAAATGTTATCAAACTGAAGCGTGAGGAAGAGACCCTGGATACC 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGAAGTTTGCCCAGAAAGTGGTCCCAGACCCAAATGTTATCAAACTGAAGCGTGAGGAAGAGACCCTGGATACC 1036
Query 916 ATCAAGCAGTACTATGTCCTGTGCAGCAGCAGAGACGAGAAGTTCCAGGCCTTGTGTAACCTCTACGGGGCCAT 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCAAGCAGTACTATGTCCTGTGCAGCAGCAGAGACGAGAAGTTCCAGGCCTTGTGTAACCTCTACGGGGCCAT 1110
Query 990 CACCATTGCTCAAGCCATGATCTTCTGCCATACTCGCAAAACAGCTAGTTGGCTGGCAGCAGAGCTCTCAAAAG 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CACCATTGCTCAAGCCATGATCTTCTGCCATACTCGCAAAACAGCTAGTTGGCTGGCAGCAGAGCTCTCAAAAG 1184
Query 1064 AAGGCCACCAGGTGGCTCTGCTGAGTGGGGAGATGATGGTGGAGCAGAGGGCTGCGGTGATTGAGCGCTTCCGA 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAGGCCACCAGGTGGCTCTGCTGAGTGGGGAGATGATGGTGGAGCAGAGGGCTGCGGTGATTGAGCGCTTCCGA 1258
Query 1138 GAGGGCAAAGAGAAGGTTTTGGTGACCACCAACGTGTGTGCCCGC----------------------------- 1182
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAGGGCAAAGAGAAGGTTTTGGTGACCACCAACGTGTGTGCCCGCGGTGAGCAGAGGACGTGTCCCACCTGGTC 1332
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1333 TGCCAGGCTCGGGGTCCCAGGCCCAATTAGAGCCAGAAATCCTTGTATACAGGGAAGTCGGATGGTCTCAGGGA 1406
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1407 GATGGGTGGGGTTGGTGACACTATTCCTTTCTAGGAGAGACTGTTTGGATTTCCCTGAGGTGGTAAGAACTCAC 1480
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1481 ACATGCCAGGTGCGGTGGCTCATGCCTGCAATCCCAAGGCAGGAAAATTGCTTGAACCCTGGAGACAGAGGTTG 1554
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1555 CAGTGAGCCGAGAATGTGCTATAGCACTCCATCCTGGGTGACAGAGTGAGACTCTGTCTCCAAAAAAAAAAAGG 1628
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1629 AAGAGGGCAGGCCCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGAATCACCTGAGG 1702
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1703 TCAGGAATTCGAGACCAGCCTGACCAATATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGCG 1776
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1777 TGGTGGCATGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGACAGGAGAATCGCTTGAACCCGGGAGGTGGAG 1850
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1851 GTTACGGTGAGTGAGATCGCGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAATAAAA 1924
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1925 AAAGAAAGAAAGAAAAGGAACTCCCGCAGAAACCAGTAGTCCTGACTTGGTGGAAGGAAATGTACAGGCATCTG 1998
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 1999 ACTGGTAGAGAACGGAGCCTACTCTTCCAGGGGCGCCCATCTCCAGAACATTGTGTCTCCCAGAGGATTACCGA 2072
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 2073 CTGATCTCATGATTTTGTTGGCACTTGCCAAAGTTCTCTTCTTTTCCTCTGGGTTCTGTTGCCTGCCTATATGT 2146
Query 1183 -------------------------------------------------------------------------- 1182
Sbjct 2147 GTGCCCTCTCTTGTACCCAGAGTTGGCCTGTCCCAAATTCTTTCCCTCTATCCCAAAGTTGGTACGCATTGACC 2220
Query 1183 ---------------------------------------------------------------------GGCAT 1187
|||||
Sbjct 2221 TACCTATGGATGACAGTGATTTCTGTCTCCTGTCCTTAGTCCTCTCAGCCTCCAACTCTCCTTCCTGCAGGCAT 2294
Query 1188 TGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACAAGGACGGGAATCCTGACAATGAGA 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TGATGTTGAACAAGTGTCTGTCGTCATCAACTTTGATCTTCCCGTGGACAAGGACGGGAATCCTGACAATGAGA 2368
Query 1262 CCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTGGCAGTGAACATGGTGGACAGCAAG 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CCTACCTGCACCGGATCGGGCGCACGGGCCGCTTTGGCAAGAGGGGCCTGGCAGTGAACATGGTGGACAGCAAG 2442
Query 1336 CACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGATAGAAAGATTGGACACAGATGATTT 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CACAGCATGAACATCCTGAACAGAATCCAGGAGCATTTTAATAAGAAGATAGAAAGATTGGACACAGATGATTT 2516
Query 1410 GGACGAGATTGAGAAAATAGCCAAC------------------------------------------------- 1434
|||||||||||||||||||||||||
Sbjct 2517 GGACGAGATTGAGAAAATAGCCAACTGAGAAGCTCCACCAGCCACTGATGCCAGCCCTGGCACTGCCCCTGCAC 2590
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2591 AGGAGACAAGTGCATTTAGGGCACAGGCCCCGACATCACCCCAAGGACAACGGCAGAAGTAGAGAGAAACTACC 2664
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2665 TACCTCACTTCAAATTATGTTTGGACTTGACAAAAATAGGTGCAAATGATGGGGGGCAATAGAAGAAAAAATTT 2738
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2739 GCATTTTGGAAAATTGGGTCCTTTCCCCACTTTTTTAAAGCCACATTCCCCCATCTTTATAATAATCTGGTCAC 2812
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2813 AGTGGTAGTCGCTGGCCCCAGGACCCCCTCCTGATTTTGGCTAGGCATCGTGGAACCAGCTCCAGCCCCTGAAG 2886
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2887 AAACGATAGATGTGCAGGTTGTGCGGAAGAGGCTGAGTGGAAAATGGTGTGAGCCCCACCGCTGTGCATCGAAT 2960
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2961 GAGGGAAGTGGCAGCAGAGAGGCCAGAGCTGCCCCCTCTCTGTCTCTTCAATGGACCCTTCACAAGTGTTTCTC 3034
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3035 CTGCCCTTGGGGCTGTCTTCCTTCTCCTGAAATCCAGAGACTTTCTTGCTCATCCCTTCTCCCTTTCACTTCTG 3108
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3109 TTCTCTGCTGCAGAAAGCAGACTTGCATATCCCTGATGAGCAGCTCGGCTACTTTTGTAAACTTCAGATTTGGA 3182
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3183 GAGAAACACGAAAGTCTGAATCCTGACCCCTTGAGAGAGAGTGATCTGGCGAGGGCCGATGAAGGGGCTGGGCC 3256
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3257 TGGTCTTGCCTTCTCTTCTCTCGGTTGCTCCCTCTGCCTAGGCCCCTGGTACTCAGTCACGGCAGCCAGGAGAC 3330
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3331 CCCAGGTGAGTTTCTGAGCGCATACGTAGTTGGTTCTTACCCCCAGGTGTCACACGGGGCCGAGAGCTGAGCAA 3404
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3405 GAATTTGGAATGGAAGTTATGACCAAGGGAATTATGCTGTTCATTTATAATAGTGGACATTATGGAGAGCTCTG 3478
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3479 ATTCCTACATAATATGAATAAGGATGGATAGGCCGGGCGTGGTGGCTCATGCCTATAATCCCAGCACGTTGGGA 3552
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3553 GGCTGAGGCGGGCGGATCGGTTGAGCTCAGGCGTTCGGGACCAGCCTGGCCAACATGATGAAACCCCGTCTCTA 3626
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3627 CCAAAAATAGAAAAAAATATAGCCGGGCCTGGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTA 3700
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3701 GGAGGATCGCTTGAGCCTGGGTAGAGGCTGCTGTGAGCTGAAATGGCGCCACTGCACTCCAGCCTGGGTAACAG 3774
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3775 AGCGAGACCCCGACTCAATAAATAAATAAGGATGGATAAATTGTAGCGTATGCACCATTCATTATGCTAAGACA 3848
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3849 TTTTAAAGTAATTATGAGAAACGCTCTACTAATGATTTGTTTTTATTTGTATTTTTCTGCTTATTAGACAAATA 3922
Query 1435 ----------------- 1434
Sbjct 3923 TATACTCATTTTAAAAA 3939
