Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_03583
• Subject: XR_380446.3
• Aligned Length: 1362
• Identities: 631
• Gaps: 648

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTGCCGCTTTGTGACTTCACCGGTTTCGCAACAAGCCAGGACCGCCCGCGCCCCACCCACCCGGCTGCCCGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCCCTCCGCCCTCGGGTCTCTGAGCGCTTCCCTCCCTCCGGGGCTGGGCCTGTCCCGGCCGTCCCGGAGTCTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGTCCCGCCGCGCCGTTAGCTGTCTGTGTCTTGGCCACCGCCTCCAGGCAGTCCGCAGCAAGCCAGCTTCTTGG  222

Query    1  -----------------------------ATGCTGTGCTTCCTGAGGGGAATGGCTTTCGTCCCCTTCCTCTTG  45
                                         ||||||||||||||.|||||||||||||||||||||||||||.||
Sbjct  223  TCCGACGAGCTCAGCGCCCTCTCACCGCGATGCTGTGCTTCCTCAGGGGAATGGCTTTCGTCCCCTTCCTCCTG  296

Query   46  GTGACCTGGTCGTCAGCCGCCTTCATTATCTCCTACGTGGTCGCCGTGCTCTCCGGGCACGTCAACCCCTTCCT  119
            |||||.||||||||.||.||||||||.|||||||||||||||||.||||||||.|||||||||||||||||.||
Sbjct  297  GTGACTTGGTCGTCCGCAGCCTTCATCATCTCCTACGTGGTCGCGGTGCTCTCTGGGCACGTCAACCCCTTTCT  370

Query  120  CCCGTATATCAGTGATACGGGAACAACACCTCCAGAGAGTGGTATTTTTGGATTTATGATAAACTTCTCTGCAT  193
            |||.|||||||||||.||.||||||||.||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  371  CCCCTATATCAGTGACACAGGAACAACTCCTCCAGAGAGTGGTATTTTTGGATTCATGATAAACTTCTCTGCAT  444

Query  194  TTCTTGGTGCAGCCACGATGTATACAAGATACAAAATAGTACAGAAGCAAAATCAAACCTGCTATTTCAGCACT  267
            |||||||.|||||.||||||||.|||||||||||.|||||..|||||||.|||.|.||||||||.|||||||||
Sbjct  445  TTCTTGGCGCAGCTACGATGTACACAAGATACAAGATAGTGGAGAAGCAGAATGAGACCTGCTACTTCAGCACT  518

Query  268  CCTGTTTTTAACTTGGTGTCTTTAGTGCTTGGATTGGTGGGATGTTTCGGAATGGGCATTGTCGCCAATTTTCA  341
            ||.|||||||||||||||||.||.|.||||||||||||||||||..|||||||||||||.||.|||||.||.||
Sbjct  519  CCCGTTTTTAACTTGGTGTCCTTGGCGCTTGGATTGGTGGGATGCATCGGAATGGGCATCGTAGCCAACTTCCA  592

Query  342  GGAGTTAGCTGTGCCAGTGGTTCATGACGGGGGCGCTCTTTTGGCCTTTGTCTGTGGTGTCGTGTACACGCTCC  415
            |||||||||.|||||.|||||.|||||.||.||.||.|||.||||.||.|||||.||.||.|||||||||||||
Sbjct  593  GGAGTTAGCCGTGCCTGTGGTCCATGATGGCGGTGCGCTTCTGGCTTTCGTCTGCGGGGTGGTGTACACGCTCC  666

Query  416  TACAGTCCATCATCTCTTACAAATCATGTCCCCAGTGGAACAGTCTCTCGACATGCCACATACGGATGGTCATC  489
            |.||.||.||||||||.||||||||.|||||||||||||||||||||.|.||.|||||..|..||||||.||||
Sbjct  667  TGCAATCGATCATCTCCTACAAATCCTGTCCCCAGTGGAACAGTCTCACCACGTGCCATGTCAGGATGGCCATC  740

Query  490  TCTGCCGTTTCTTGCGCAGCTGTCATCCCCATGATTGTCTGTGCTTCACTAATTTCCATAACCAAGCTGGAGTG  563
            ||.||.|||||.||||||||||||.||||||||||||.||||||||||||.|||||.||||||||||||||.||
Sbjct  741  TCCGCTGTTTCGTGCGCAGCTGTCGTCCCCATGATTGCCTGTGCTTCACTCATTTCTATAACCAAGCTGGAATG  814

Query  564  GAATCCAAGAGAAAAGGATTATGTATATCACGTAGTGAGTGCGATCTGTGAATGGACAGTGGCCTTTGGTTTTA  637
            ||||||||.|||||||||||||.||||||||||.|||||.||.||||||||.|||||.|||||.||||||||||
Sbjct  815  GAATCCAAAAGAAAAGGATTATATATATCACGTGGTGAGCGCCATCTGTGAGTGGACCGTGGCTTTTGGTTTTA  888

Query  638  TTTTCTACTTCCTAACTTTCATCCAAGATTTCCAGAGTGTCACCCTAAGGATATCCACAGAAATCAATGGTGAT  711
            |||||||.||||||||.||||||||||||||||||||||||||.|||||||||||||||||||||||||..||.
Sbjct  889  TTTTCTATTTCCTAACATTCATCCAAGATTTCCAGAGTGTCACTCTAAGGATATCCACAGAAATCAATGACGAC  962

Query  712  ATT-----------------------------------------------------------------------  714
            .||                                                                       
Sbjct  963  TTTTGAAAGATCGAGAATCCTGTCTCATTCAGGGAGTGTCGCAGACAGTTTCTGGAAGTGGACAGAGGACGGAC  1036

Query  715  --------------------------------------------------------------------------  714
                                                                                      
Sbjct 1037  GGGCTTGGATGTCACCCTGATGGGGACTTTATCTGTGGCACATCCGGGACTTGAATTTCATTAAGAGTTCCTAG  1110

Query  715  --------------------------------------------------------------------------  714
                                                                                      
Sbjct 1111  TAGTTCAATTTACAAAGCTGTGTGAGCTTCATGATTGTGTGACAACTCTCTCCTGGACAGATAGCACAGAAATT  1184

Query  715  --------------------------------------------------------------------------  714
                                                                                      
Sbjct 1185  GTTACATGGGCTAAACCTGTCTTGGCAAACCGAGGAGGCCCCCAAATCACACTCTGCAGATTCCATGCGACTTC  1258

Query  715  --------------------------------------------------------------------------  714
                                                                                      
Sbjct 1259  TAGTTTTATCCCTGTTTTGGTGTTATTTTTAATTTCTACAAATATGTATTTCCTTGGACTTTGTACCCGAGAAA  1332

Query  715  ------------------------------  714
                                          
Sbjct 1333  GTAAAATAAAATATTTCTTTATTTTAGTAA  1362