Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03600
- Subject:
- XR_933371.2
- Aligned Length:
- 2481
- Identities:
- 1645
- Gaps:
- 756
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCTCGGTGGCTGTCAGGTGAGCTCTGGAGATTGTTCCGGGCACCCCTGTGAACTGCTCATCTCCTTTCAGGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGGTGACAGCTCTTCTTCAGAGAGAAGGACAACAAGGTCCCAGTGGCCCCTCCTCAGGGTCTGCAGTAGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCGCATGGCCCACCGAGGTGAACCATGACCGGCTGGCCAACATTCGCCATTGACCAGCCGGAGTTGCATCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCAGGAGGTGACCCCTCCTCCAGCTGCCCCCAACTCGCCCACCCTCGCCCAGGAAAGTGCCCGCAGCTGCCACG 296
Query 1 -------------------------------------------ATGGTTTTGTACACGACCCCCTTTCCTAACA 31
|||||||||||||||||||||||||||||||
Sbjct 297 GACACCATGTAGTAGGGCCGGCTGCGGCGCCCAGTGAGCTGCGATGGTTTTGTACACGACCCCCTTTCCTAACA 370
Query 32 GCTGTCTGTCCGCCCTGCACTGTGTGTCCTGGGCCCTTATCTTTCCATGCTACTGGCTGGTGGACCGGCTCGCT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCTGTCTGTCCGCCCTGCACTGTGTGTCCTGGGCCCTTATCTTTCCATGCTACTGGCTGGTGGACCGGCTCGCT 444
Query 106 GCCTCCTTCATACCCACCACCTACGAGAAGCGCCAGCGGGCAGACGACCCGTGCTGCCTGCAGCTGCTCTGCAC 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCCTCCTTCATACCCACCACCTACGAGAAGCGCCAGCGGGCAGACGACCCGTGCTGCCTGCAGCTGCTCTGCAC 518
Query 180 TGCCCTCTTCACGCCCATCTACCTGGCCCTCCTGGTGGCCTCGCTGCCCTTTGCGTTTCTCGGCTTTCTCTTCT 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGCCCTCTTCACGCCCATCTACCTGGCCCTCCTGGTGGCCTCGCTGCCCTTTGCGTTTCTCGGCTTTCTCTTCT 592
Query 254 GGTCCCCACTGCAGTCGGCCCGCCGGCCCTACATCTATTCACGGCTGGAAGACAAGGGCCTGGCCGGTGGGGCA 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGTCCCCACTGCAGTCGGCCCGCCGGCCCTACATCTATTCACGGCTGGAAGACAAGGGCCTGGCCGGTGGGGCA 666
Query 328 GCCCTGCTCAGTGAATGGAAGGGCACGGGGCCTGGCAAAAGCTTCTGCTTTGCCACTGCCAACGTCTGCCTCCT 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCCCTGCTCAGTGAATGGAAGGGCACGGGGCCTGGCAAAAGCTTCTGCTTTGCCACTGCCAACGTCTGCCTCCT 740
Query 402 GCCCGACTCACTCGCCAGGGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAGAATCC 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCCCGACTCACTCGCCAGGGTCAACAACCTTTTTAACACCCAAGCGCGGGCCAAGGAGATCGGGCAGAGAATCC 814
Query 476 GCAATGGGGCCGCCCGGCCCCAGATCAAAATTTACATCGACTCCCCCACCAATACCTCCATCAGCGCCGCTAGC 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCAATGGGGCCGCCCGGCCCCAGATCAAAATTTACATCGACTCCCCCACCAATACCTCCATCAGCGCCGCTAGC 888
Query 550 TTCAGCAGCCTGGTGTCACCACAGGGCGGCGATGGGGTGGCCCGGGCCGTCCCCGGGAGCATTAAGAGGACAGC 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTCAGCAGCCTGGTGTCACCACAGGGCGGCGATGGGGTGGCCCGGGCCGTCCCCGGGAGCATTAAGAGGACAGC 962
Query 624 CTCTGTGGAGTACAAGGGTGACGGTGGGCGGCACCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTGGGGACC 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCTGTGGAGTACAAGGGTGACGGTGGGCGGCACCCCGGTGACGAGGCTGCCAACGGCCCAGCCTCTGGGGACC 1036
Query 698 CTGTCGACAGCAGCAGCCCGGAGGATGCCTGCATCGTGCGCATCGGTGGCGAGGAGGGCGGCCGGCCACCTGAA 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGTCGACAGCAGCAGCCCGGAGGATGCCTGCATCGTGCGCATCGGTGGCGAGGAGGGCGGCCGGCCACCTGAA 1110
Query 772 GCTGACGACCCTGTGCCTGGGGGCCAGGCCAGGAACGGAGCTGGCGGGGGCCCAAGGGGCCAGACGCCCAACCA 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCTGACGACCCTGTGCCTGGGGGCCAGGCCAGGAACGGAGCTGGCGGGGGCCCAAGGGGCCAGACGCCCAACCA 1184
Query 846 TAATCAGCAGGACGGGGATTCAGGGAGCCTGGGCAGCCCCTCGGCCTCCCGGGAGTCCCTGGTGAAGGGGCGAG 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TAATCAGCAGGACGGGGATTCAGGGAGCCTGGGCAGCCCCTCGGCCTCCCGGGAGTCCCTGGTGAAGGGGCGAG 1258
Query 920 CTGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAG 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTGGGCCAGACACCAGTGCCAGCGGGGAGCCAGGTGCCAACAGCAAGCTCCTGTACAAGGCCTCGGTGGTGAAG 1332
Query 994 AAGGCGGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCATGAGGTCTCCGCCTTCTTCCCCGCCAA 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGGCGGCTGCACGCAGGAGGCGGCACCCCGACGAGGCCTTCGACCATGAGGTCTCCGCCTTCTTCCCCGCCAA 1406
Query 1068 CCTGGACTTCCTGTGCCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCT 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCTGGACTTCCTGTGCCTGCAGGAGGTGTTTGACAAGCGAGCAGCCACCAAATTGAAAGAGCAGCTGCACGGCT 1480
Query 1142 ACTTCGAGTACATCCTGTACGACGTCGGGGTCTACGGCTGCCAGGGCTGCTGCAGCTTCAAGTGTCTCAACAGC 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACTTCGAGTACATCCTGTACGACGTCGGGGTCTACGGCTGCCAGGGCTGCTGCAGCTTCAAGTGTCTCAACAGC 1554
Query 1216 GGCCTCCTCTTTGCCAGCCGCTACCCCATCATGGACGTGGCCTATCACTGTTACCCCAACAAGTGTAACGACGA 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGCCTCCTCTTTGCCAGCCGCTACCCCATCATGGACGTGGCCTATCACTGTTACCCCAACAAGTGTAACGACGA 1628
Query 1290 TGCCCTGGCCTCTAAGGGAGCTCTGTTTCTCAAG---GTGCAGGTGGGAAGCACACC-TCAGGAC-CAAAGAAT 1358
|||||||||||||||||||||||||||||||||| .||| || .|||||| |||||
Sbjct 1629 TGCCCTGGCCTCTAAGGGAGCTCTGTTTCTCAAGTCTTTGC--------------CCGCCAGGACTCAAAG--- 1685
Query 1359 CG---------TCGGGTACATCGCCTG-------------CACACA----CCTGCATGCCCCGCAAGAGGACAG 1406
| |||.|| .||.||.|| .||||| .|||| |.|.|.||||
Sbjct 1686 -GCACAGCCTTTCGTGT-GATTGCTTGTTTTTGCAAGAGAAACACAAGGCTCTGC--GGCTCCCAAG------- 1748
Query 1407 CGCCATCCGGTGTGGGCAGCTGGACCTGCTTCAGGACT------GGCTGGCTGATTTCC-GAAAATCTACCTCC 1473
|||| || ||| |||||.| ||| || |.||||
Sbjct 1749 -GCCA--CG--------AGC-----------CAGGAATCAATGAGGC----------CCAGCAAAT-------- 1782
Query 1474 TCGTCCAGCGCAGCCAACCCCGAGGAGC-TGGTGGCATTTGACGTCGTCTGTGGAGATTTCAACTTTGATAACT 1546
||.|..|.|||.| |||||..||...|||.|...||.||||
Sbjct 1783 ---------------AATCAAGTGGATCTTGGTGAGATCACACGGCAGATGAGGAG------------------ 1823
Query 1547 GCTCCTCTGACGACAAGC---------TGGAGCAGCAACACTCCCT-GTTCACCCACTACAGGGACCCCTGCCG 1610
.||.|||| .|||||||.| ||| || |||| |||.|.|
Sbjct 1824 ----------GGAGAAGCGGGGCGGGAGGGAGCAGGA------CCTCGT-----CACT---------CCTCCGG 1867
Query 1611 CC--TGGGGCCTGGTGAGGAGAAGCCGT---GGGCCATCGGTACTCTGCTGGACACGAACGGCCTGTACGATGA 1679
|| ||||..||.|| ||| ||||| .|.|||| .||.|.| |||| |||
Sbjct 1868 CCAGTGGGTTCTTGT----------CGTGCAGGGCC-----CAGTCTG-AGGCCTC------CCTG--CGA--- 1914
Query 1680 GGATGTGTGCACCCCCG--------ACAACCTGCAGAAGGT----CC------TGGA-GAGTGAGGAGGGCCGC 1734
||||.||.|||.| |||.|..|..|.|||| || |||| |||||| ||||
Sbjct 1915 ----GTGTCCAACCCTGTCCGGGACACAGCGCGGGGCAGGTGACACCAAGTGTTGGATGAGTGA-GAGG----- 1978
Query 1735 AGGGAGTACCTGGCGTTTCCC-----ACCAGCAAGAGCTCGGGCCAGAAGGGGCGGAAGGAG---CTGCTGAAG 1800
|||.|| || ||||.||| .|.||| ||.||| |||| |.|| ||.
Sbjct 1979 ---------CTGACG----CCTTAAGACCAACAA----ACAGGC------GGCCGG--GGAGAAACCGC--AAA 2025
Query 1801 GGCAACGGCCGGCGCATC-GACTACATGCTGCATGCAGAGGAGGG----GCTGTGC-------------CCAGA 1856
|.|| ||.||.|.|| || |.||.|| ||||||.||.| ||.|.|| || ||
Sbjct 2026 GACA----CCAGCCCCTCAGA----AAGCAGC--GCAGAGCAGCGCACAGCAGCGCACGACAAACAGATCC-GA 2088
Query 1857 CTGGAAG--GCCGAGGTGGAAGAATTCAGTTTTATCACCCAGCTGTCCG-GCCTGACGGACCACCTGCCAGTAG 1927
||||||| ||| |.||| .||| .||| | ||||| .|||| ||.||
Sbjct 2089 CTGGAAGCTGCC-----------------TCTTA-GACC---ATGT--GAGCCTG--TGACC-CCGGC------ 2130
Query 1928 CCATGCGACTGA-----TG------GTGTCTT---CGGGGGAGG-AGGAGGCA--------------------- 1965
||| |.|||.| || ||||.|| |||.|.||| .|||.|||
Sbjct 2131 CCA--CAACTCAACTTCTGGCCTCAGTGTGTTCAACGGTGCAGGTGGGAAGCACACCTCAGGACCAAAGAATCG 2202
Query 1966 --------------------------------------- 1965
Sbjct 2203 TCGGGTACATCGCCTGCACACACCTGCATGCCCCGCAAG 2241
