Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03631
- Subject:
- NR_037906.1
- Aligned Length:
- 2774
- Identities:
- 867
- Gaps:
- 1819
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTCCCCGCGGCCGGAAAGCGCCGTGCGGGCTTCAGGCTGATAGGAGCGTCTTTCCTCGTCGCTGTTTGCGGCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTGGTCGAGTTGTGCGGAGCTTCTCGGCCGTCCCCACTGGCCACCATGTCCGCCCAGGCGCAGATGCGGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGTTGGACCAGCTCATGGGCACGGCTCGGGACGGTTCAGTGTATCTTTGCCTGCCTACATCAATCTGCAAGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTTGCAGAAAAGCCTCATGTTCATCGAGCCGTGAGTCACAACCAATTTCTAAGCTGTTATAACAAAAAAGTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTGCTTTTTTCCCACAAGTAACTTTAAAAGTGTAGTTTAGAAAGAAAACATTTTCAGTAAAAAGACACGACATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATCCTGGATGCTTGCCAATCCTGAAGTATATTCTCCCTGACTATTACACAGCACTGTGTCCTGTACACAGATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCTTAGAATTTGTCACATACCACTTTGCCTTTACTTTTATGTATCATTCCCCGACTTCCTTACTGCAGGTGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCAAGAAAACTTTTCCTTTAAAACTTTTCAACAGCGGGCATAAAATTCTGCAGCTGAGTTCTTGAAGATTGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATGGGTACAGTATGTGTTGGAGTTCACAGTGTGTATTGACTAACCTGATTCCTTTTTGCTTTCTTTGGTATTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTTGTTAAAAGTGACTCCCAGGTGCCAACTTTCCTTTTTGAGGGTGGGGATGAAAGGGGAAGAAGAAGAAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGGTCTAGAGATATTTAAGTCAGTGATAGAGCTTGAAACCGTTCTTCCTCTTGTAGTTTTTTTTCATAAAATA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCCTATTAATTTGATTCTAACAAGAAAATCAGATTATTGAATAGCTTTGGTTGGTGGAGATTGGCAGCTGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATGATCCGCAGTGGATTCATGGCACTCATTACACCCAGTCTTGATGGGTCATTTGCCCACATGTAAATTTGGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGATGCCTTCTGGTGCTCACTCCTACTTCTGACTCTGTTCTGCGAATTAACGGTGGAGTTAGATGTGGTTCAGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTGCTTCTTCATAAAAAACTTAGCTTAAAAACTATTTGTATTTTATTCCAATTGTAAATATCTTTAGCTCAGTT 1110
Query 1 ---------------------------------------------ATGTCCGCCCAGGCG------------CA 17
|| ||.|||||.| ||
Sbjct 1111 TCTTAGTGTATATGATGGGAAGAATACAGAAACACTAGTCTGCAAAT---CGTCCAGGTGTATTAATTTTGCCA 1181
Query 18 GATGCGGGCCCTG----CTGGACCAGCTCATGGGCACGGCTCGGGAC--------------------------- 60
||| .|||.|| .||.|..||.|.|| ||
Sbjct 1182 GAT---AGCCTTGTGTAGTGAATGAGATAAT--------------ACTTTATTTAAAACCACAAATGAATTTCA 1238
Query 61 GGAGACGAAACCAGACAGAGGGTCAAGTTTACAGATGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTGCCC 134
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1239 GGAGATGAAACCAGACAGAGGGTCAAGTTTACAGATGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTGCCC 1312
Query 135 CCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAG 208
||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||||
Sbjct 1313 CCATGACATCCTTGCTGGGACGCGCATGGATTTAGGAGAATGTACCAAAATCCACGACTTGGCTCTTCGAGCAG 1386
Query 209 ATTATGAGATTGCAAGTAAAGAAAGAGACCTGTTTTTTGAATTAGATGCAATGGATCACTTGGAGTCCTTTATT 282
|||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||.|||
Sbjct 1387 ATTATGAAATTGCAAGTAAAGAAAGAGACCTGTTTTTTGAATTAGATGCTATGGATCACTTAGAGTCCTTCATT 1460
Query 283 GCTGAATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGGAAATCAGTGCGGAAGT 356
||.||.||||||||||||||.||.||.|||||.|||||||||||.|||||||||||||||||||||||.|||||
Sbjct 1461 GCAGAGTGTGATCGGAGAACCGAACTTGCCAAAAAGCGGCTGGCTGAAACACAGGAGGAAATCAGTGCAGAAGT 1534
Query 357 TTCTGCAAAGGCAGAAAAAGTACATGAGTTAAATGAAGAAATAGGAAAACTCCTTGCTAAAGCCGAACAGCTAG 430
|||.||.|||||||||||.||||||||.|||||||||||||||||||||||.|||||||||||.||.|||||||
Sbjct 1535 TTCGGCTAAGGCAGAAAAGGTACATGAATTAAATGAAGAAATAGGAAAACTTCTTGCTAAAGCTGAGCAGCTAG 1608
Query 431 GGGCTGAAGGTAATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAGAAAAAAGAA 504
|.||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||.||||||||||||
Sbjct 1609 GAGCTGAAGGAAATGTGGACGAATCCCAGAAGATTCTTATGGAAGTGGAGAAAGTTCGTGCAAAGAAAAAAGAA 1682
Query 505 GCTGAGGAAGAATACAGAAATTCCATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTG 578
||.|||||||||||.|||||||||||||||||||||||||||||.||||||||.||.|||||.||||||||.||
Sbjct 1683 GCAGAGGAAGAATATAGAAATTCCATGCCTGCATCCAGTTTTCAACAGCAAAAACTCCGTGTTTGCGAGGTTTG 1756
Query 579 TTCAGCCTACCTTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT 652
||||||.|||||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||.||||||
Sbjct 1757 TTCAGCTTACCTTGGTCTCCATGACAATGACCGTCGGCTTGCAGACCACTTCGGGGGCAAGTTACACCTGGGGT 1830
Query 653 TCATTCAGATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGTCGCTGAAAAGCAGGAGAAGAGAAATCAGGAT 726
|||||||||||||.|||||||||||||||||||||||||||||.||||||||.|||||.||.||||||||||||
Sbjct 1831 TCATTCAGATCCGGGAGAAGCTTGATCAGTTGAGGAAAACTGTGGCTGAAAAACAGGAAAAAAGAAATCAGGAT 1904
Query 727 CGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCG 800
||.||||||||.|||||||||||.||.||.||.|||||.|||.||||||||||.||||||||||||.|||||||
Sbjct 1905 CGATTGAGGAGAAGAGAGGAGAGAGAGCGAGAAGAGCGCCTGGGCAGGAGGTCTGGATCAAGAACCCGAGATCG 1978
Query 801 CAGGAGGTCACGCTCCCGGGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGACGGAAATTGTCCC 874
|||.||||||||||||||||||||.||.|||||||||||.||.|||||||||.|||||||.|||||.||.||||
Sbjct 1979 CAGAAGGTCACGCTCCCGGGATCGTCGACGGAGGCGGTCTAGGTCTACCTCCAGAGAGCGGCGGAAGTTTTCCC 2052
Query 875 GGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCT 948
|.|||.|.||||||||||||.|..|||||||.|||||||||||||||||||||||||||||.||.||.||||||
Sbjct 2053 GTTCCAGATCCCGAGATAGATACAGGCGCCATCGCAGCCGTTCCCGGAGCCACAGCCGGGGTCACCGCCGGGCT 2126
Query 949 TCCCGGGACCGAAGTGCGAAATACAAG----------------------------------------------- 975
|||.|||||||.|||.|.|||||||||
Sbjct 2127 TCCAGGGACCGGAGTACAAAATACAAGTAACTACTCTGACTCCTCAGTAACTTCAACCAGGAGTGAGCCCTTTG 2200
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2201 TCTCTGTGTTCCCAAGATCTGCTAAGATCTGTCATCCTTGCCTTTTGGCCATTACATCTGGTAGGGACAAGGTT 2274
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2275 GGGCTTGTGGGGATGCAGGTTCTGGGTGACTAGCACCCAGTGTTGGTGCCCCGAGGAATAGAGAGCGGCACCAG 2348
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2349 TACAACACTTGGCTGGGATGGGGCAGGGCAGTGAGCTCTCTCACATGGCTCCGCTTTGCTGGGCTTTACCTACT 2422
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2423 TTAACTTGGTAAAAAGCAGCTGAGATTTTTGTCTTGATCAGGTTTTGCTTAATTACTTCTCTTGGACTTTTTTT 2496
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2497 AAATTTTTGTTTTGAGACAGGCATTCACTTTGTAACTTAAGTTGATTTGAACTCAGGATCCTCCTGCGTGCTGA 2570
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2571 CATGACAAGTGTTTCTCCCCATGCTTGACCTGTGCCTTTCCATTCCACTTCTTCCATTGTTGTTACATCCTGGG 2644
Query 976 -------------------------------------------------------------------------- 975
Sbjct 2645 TCATATTTCACGCGCAAAGCTTTGTTGTATTCCCATTGTTTTGTTTCTGTTACACTGAAAACTTTCCTTATTAA 2718
Query 976 ------------------------------------ 975
Sbjct 2719 AATTCTTTGCTTTTTATTTACTTTTATTATATGTTT 2754
