Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_03644
• Subject: XM_011239936.1
• Aligned Length: 1287
• Identities: 745
• Gaps: 429

Alignment

Query    1  ATGGCCAGCCCAAGAACCAGGAAGGTTCTTAAAGAAGTCAGGGTGCAGGATGAGAACAACGTTTGTTTTGAGTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGGCGCGTTCAATCCTCAGTGGGTCAGTGTGACCTACGGCATCTGGATCTGCCTGGAGTGCTCGGGGAGACACC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCGGGCTTGGGGTTCACCTCAGCTTTGTGCGCTCTGTTACTATGGACAAGTGGAAGGACATTGAGCTTGAGAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  ATGAAAGCTGGTGGGAATGCTAAGTTCCGAGAGTTCCTGGAGTCTCAGGAGGATTACGATCCTTGCTGGTCCTT  296
                            ||||||||||||||||||||||||||.|.|||||.||.||.||.|||.|||||||..|
Sbjct    1  ----------------ATGCTAAGTTCCGAGAGTTCCTGGAGACACAGGACGACTATGAGCCTAGCTGGTCACT  58

Query  297  GCAGGAGAAGTACAACAGCAGAGCCGCGGCCCTCTTTAGGGATAAGGTGGTCGCTCTGGCCGAAGGCAGAGAGT  370
            ||||||.|||||||.|||||||||||||||.|||||.||||||||                             
Sbjct   59  GCAGGACAAGTACAGCAGCAGAGCCGCGGCGCTCTTCAGGGATAA-----------------------------  103

Query  371  GGTCTCTGGAGTCATCACCTGCCCAGAACTGGACCCCACCTCAGCCCAGGACGCTGCCGTCCATGGTGCACCGA  444
                                                                                    ||
Sbjct  104  ------------------------------------------------------------------------GA  105

Query  445  GTCTCTGGCCAGCCGCAGAGTGTGACCGCCTCCTCGGACAAGGCTTTTGAAGACTGGCTGAATGATGACCTCGG  518
            |.||||||||||||.|||||||...|||||||...||||||||||||||||||.|||||||||||||||||.||
Sbjct  106  GCCTCTGGCCAGCCACAGAGTGCAGCCGCCTCTGGGGACAAGGCTTTTGAAGATTGGCTGAATGATGACCTGGG  179

Query  519  CTCCTATCAAGGGGCCCAGGGGAATCGCTACGTGGGGTTTGGGAACAC---GCCACCGCCTCAGAAGAAAGAAG  589
            .|||||.||.||.||.||||.|||||||||.||.||||||||||||||   ||||   ||||||||||.|||||
Sbjct  180  TTCCTACCAGGGTGCTCAGGAGAATCGCTATGTAGGGTTTGGGAACACAGTGCCA---CCTCAGAAGAGAGAAG  250

Query  590  ATGACTTCCTCAACAACGCCATGTCCTCCCTGTACTCGGGCTGGAGCAGCTTCACCACTGGAGCCAGCCGGTTT  663
            ||||||||||||||||.||||||||.||.||||||||||||||||||||.||.||||||||.||.|||..||||
Sbjct  251  ATGACTTCCTCAACAATGCCATGTCATCGCTGTACTCGGGCTGGAGCAGTTTTACCACTGGGGCGAGCAAGTTT  324

Query  664  GCCTCGGCAGCCAAGGAGGGCGCTACAAAGTTTGGATCCCAAGCGAGTCAGAAGTTTTGGGGTCACAAGCAGCA  737
            ||.||.|||||.||||||||.||||||||.||||||||.|||||.||||||||                     
Sbjct  325  GCATCTGCAGCAAAGGAGGGTGCTACAAAATTTGGATCTCAAGCAAGTCAGAA---------------------  377

Query  738  GCCGGAGCCGGCGTCCGAGCTGGGCCACAGCCTGAACGAGAACGTCCTCAAGCCTGCGCAGGAGAAGGTGAAGG  811
                     |||.||.|||.||||||||||||||||.|||||.||.|||||||||||.||||||||||||||||
Sbjct  378  ---------GGCTTCGGAGTTGGGCCACAGCCTGAATGAGAATGTTCTCAAGCCTGCACAGGAGAAGGTGAAGG  442

Query  812  AGGGAAAGATTTTTGATGATGTCTCCAGTGGGGTCTCTCAGTTGGCGTCCA------AGGGAGTCGGTAGTAAG  879
            ||||||.|||||||||||||||.|||||||||||||||||||||||.||||      |||||||.||.||||||
Sbjct  443  AGGGAAGGATTTTTGATGATGTGTCCAGTGGGGTCTCTCAGTTGGCATCCAAGGTCCAGGGAGTTGGCAGTAAG  516

Query  880  GGATGGCGGGACGTCACCACCTTTTTTTCGGGGAAAGCAGAGGGCCCCTTGGACAGCCCCTCGGAGGGCCACAG  953
            ||||||||.||.|||||.||.||.||.||.||||||||.||.|.|.|.|..|||||.||||..|||||||||||
Sbjct  517  GGATGGCGTGATGTCACTACTTTCTTCTCTGGGAAAGCCGAAGACTCTTCAGACAGACCCTTAGAGGGCCACAG  590

Query  954  TTATCAGAACAGCGGTCTGGACCACTTCCAAAACAGCAACATAGACCAGAGCTTCTGGGAGACCTTTGGAAGTG  1027
            .||.|||||||||.||...|||.|||..||.||||||||||||||||||||||||||||||||||||||.||||
Sbjct  591  CTACCAGAACAGCAGTGGAGACAACTCTCAGAACAGCAACATAGACCAGAGCTTCTGGGAGACCTTTGGGAGTG  664

Query 1028  CTGAGCCCACCAAGACCCGCAAGTCCCCGAGCAGCGACAGCTGGACGTGCGCGGACACCTCCACCGAGAGGAGG  1101
            ||||||||.|||||.|   |||||||||.|||||.|||||||||||.||.||.||..|.||.||.|.|||||||
Sbjct  665  CTGAGCCCCCCAAGGC---CAAGTCCCCAAGCAGTGACAGCTGGACCTGTGCAGATGCTTCAACAGGGAGGAGG  735

Query 1102  AGCTCGGACAGCTGGGAGGTGTGGGGC------TCGGCCTCCACCAACAGGAACAGCAACAGCGACGGC-----  1164
            |||||||||||||||||.||.||||||      ||.||.||||.|||||.|||||||||.|||||.|||     
Sbjct  736  AGCTCGGACAGCTGGGACGTTTGGGGCTCAGGTTCCGCATCCAACAACAAGAACAGCAATAGCGATGGCTGGGA  809

Query 1165  -------------------GGGGAGGGCGGGG---AGGGCACCAAGAAGGCAGTGCCGCCGGCCGTGCCCA---  1213
                               |||||||||.|||   |||.|||||||||||||  |||     ||.|  |||   
Sbjct  810  GAGTTGGGAGGGAGCCAGTGGGGAGGGCAGGGCAAAGGCCACCAAGAAGGCA--GCC-----CCAT--CCACGG  874

Query 1214  CTGATGATGGCTGGGACAACCAGAACTGG  1242
            |||||||.|||||||||||||||||||||
Sbjct  875  CTGATGAGGGCTGGGACAACCAGAACTGG  903