Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03660
Subject:
NM_001288992.3
Aligned Length:
1974
Identities:
1098
Gaps:
876

Alignment

Query    1  ATGGGTGGGCACCTGTCCCCATGGCCCACATACACCAGTGGCCAGACCATTTTGCAAAATCGAAAACCCTGTTC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGATGACTACCGGAAGCGAGTAGGGAGCTGCCAGCAGCACCCCTTTCGCACTGCCAAGCCCCAGTACTTGGAGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  AACTGGAAAACTACCTACGCAAGGAGCTCCTCCTGCTGGACCTGGGCACAGATTCCACCCAGGAACTAAGGCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CAGCCTTACAGAGAGATCTTTGAGTTCTTCATAGAGGACTTCAAAACGTACAAGCCATTACTATCCTCCATCAA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  GAATGCGTATGAGGGGATGCTGGCCCACCAAAGGGAGAAGATTCGGGCTCTGGAGCCCCTGAAGGCCAAGCTTG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  TCACTGTGAATGAGGACTGCAATGAGAGGATCCTGGCCATGAGAGCTGAGGAGAAATATGAAATCTCCCTGCTC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  AAGAAAGAGAAGATGAACTTGCTAAAACTCATCGACAAAAAGAATGAGGAGAAGATTTCATTGCAGAGCGAGGT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GACCAAACTGAGGAAGAACTTGGCTGAGGAGTACCTGCACTACCTCAGTGAGCGAGATGCCTGTAAGATCCTCA  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TCGCAGACCTGAATGAGCTGCGGTACCAGCGGGAGGACATGTCATTAGCCCAGTCGCCAGGCATCTGGGGGGAG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  GACCCTGTGAAGTTAACCCTGGCTCTTAAGATGACCCGGCAAGACCTGACCCGCACGCAGATGGAACTCAACAA  740
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  741  CATGAAGGCCAACTTTGGAGATGTGGTCCCCAGGAGGGACTTTGAAATGCAGGAGAAGACCAACAAGGATCTTC  814
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  815  AGGAGCAGCTGGACACCCTGAGAGCCAGCTACGAGGAGGTTCGCAAGGAGCATGAGATCCTCATGCAGCTGCAC  888
                                                                          ||||||||||||
Sbjct    1  --------------------------------------------------------------ATGCAGCTGCAC  12

Query  889  ATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   13  ATGAGCACGCTGAAGGAACGGGACCAATTCTTCTCTGAGCTGCAGGAGATCCAGCGCACTTCCACGCCGCGGCC  86

Query  963  TGACTGGACCAAGTGCAAAGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   87  TGACTGGACCAAGTGCAAAGATGTGGTGGCTGGGGGCCCAGAGCGCTGGCAGATGCTGGCTGAGGGCAAGAACA  160

Query 1037  GCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGT  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  161  GCGACCAGCTGGTGGACGTGCTCCTGGAAGAGATTGGTTCGGGGCTGCTGCGGGAGAAAGACTTCTTCCCTGGT  234

Query 1111  CTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  235  CTGGGCTATGGGGAAGCCATCCCTGCTTTTCTTCGGTTTGATGGCCTCGTGGAGAACAAGAAGCCAAGCAAGAA  308

Query 1185  GGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAGCAGAAAGAGACGTTCCCAGATT  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  309  GGACGTGGTCAACCTCCTCAAGGATGCCTGGAAGGAACGTCTTGCTGAGGAGCAGAAAGAGACGTTCCCAGATT  382

Query 1259  TCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCTGGGCTTATACTATTTTTGAAAAT  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  383  TCTTCTTCAATTTCCTGGAGCATCGCTTTGGGCCCAGTGATGCCATGGCCTGGGCTTATACTATTTTTGAAAAT  456

Query 1333  ATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATGCAGTCTTGATGGGAAAGCGGAGTGAGAATGT  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  457  ATCAAGATCTTCCACTCCAACGAGGTTATGAGTCAGTTCTATGCAGTCTTGATGGGAAAGCGGAGTGAGAATGT  530

Query 1407  GTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGC  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  531  GTATGTCACCCAGAAGGAGACAGTAGCCCAGCTGCTGAAGGAGATGACAAATGCTGACAGTCAGAACGAGGGGC  604

Query 1481  TACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  605  TACTAACCATGGAGCAGTTCAACACTGTCCTCAAGAGTACCTTCCCTCTCAAGACAGAAGAGCAAATCCAGGAG  678

Query 1555  CTGATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCAACTACCGCTCACTGTTTATGGA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  679  CTGATGGAGGCAGGGGGCTGGCATCCCAGCAGCAGCAATGCAGACTTGCTCAACTACCGCTCACTGTTTATGGA  752

Query 1629  GGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGACGAGTACT  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  753  GGATGAGGAGGGCCAGAGTGAGCCCTTTGTGCAAAAACTCTGGGAACAATACATGGATGAGAAGGACGAGTACT  826

Query 1703  TACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTG  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  827  TACAGCAGCTAAAGCAGGAGCTTGGCATAGAACTCCATGAGGAAGTGACTCTGCCCAAGCTGCGAGGGGGCCTG  900

Query 1777  ATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTC  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  901  ATGACCATCGACCCCAGCCTGGACAAGCAGACAGTGAACACCTACATGAGCCAGGCCTTCCAGCTCCCTGAGTC  974

Query 1851  GGAAATGCCAGAGGAGGGTGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCGGCTTC  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  975  GGAAATGCCAGAGGAGGGTGACGAGAAGGAAGAAGCCGTGGTGGAAATCCTCCAGACTGCCCTGGAGCGGCTTC  1048

Query 1925  AGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGC  1974
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049  AGGTGATTGACATCAGGCGTGTGGGACCTCGAGAGCCAGAGCCTGCAAGC  1098

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