Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03802
- Subject:
- NR_146949.1
- Aligned Length:
- 2217
- Identities:
- 984
- Gaps:
- 1233
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCATCCGGGCTCCCGGCAGCGGCGCTGCGGCGGCTCGCGGGAGACGCTGCGCGCGGGGCTAGCGGGCGGCGGA 74
Query 1 ------------------------------------------------------------ATGGCAGGCTCCCT 14
||||||||||||||
Sbjct 75 GCGGACGGCGACGGGGCGCTCTCGGGCTGCCGGCGGGGCCGAGCGCCGCGCGTCCCGAGCATGGCAGGCTCCCT 148
Query 15 GCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCCCCAGTTCA 88
||||||||||||||||||||||||||||||
Sbjct 149 GCCTCCCTGCGTGGTGGACTGTGGCACCGG-------------------------------------------- 178
Query 89 TTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGAGAGTGTTGAGGGGA 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 ------------GTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGAGAGTGTTGAGGGGA 240
Query 163 GTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACG 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACG 314
Query 237 ACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTG 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 ACATGGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTG 388
Query 311 AACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAA 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389 AACCTGAGGACCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAA 462
Query 385 ATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTG 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 463 ATTATGTTTGAATCATTTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTG 536
Query 459 GACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTA 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 GACATCTCGACAAGTGGGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTA 610
Query 533 TCCCAGTGGCAGAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTAT 606
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 TCCCAGT----GAAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTAT 680
Query 607 TTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCAT 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 681 TTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCAT 754
Query 681 TAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGT 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 TAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGT 828
Query 755 GGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTC 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 GGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAGATTC 902
Query 829 CTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATCTCAGATGTTGTTGA 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 CTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATCTCAGATGTTGTTGA 976
Query 903 TGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAG------------------------- 951
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 977 TGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAGAATGTCGTACTCTCAGGAGGCTCCA 1050
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1051 CCATGTTCAGGGATTTCGGACGCCGACTGCAGAGGGATTTGAAGAGAGTGGTGGATGCTAGGCTGAGGCTCAGC 1124
Query 952 -------------------------------------------------------------------------- 951
Sbjct 1125 GAGGAGCTCAGCGGCGGGAGGATCAAGCCGAAGCCTGTGGAGGTCCAGGTGGTCACGCATCACATGCAGCGCTA 1198
Query 952 -------------------------------------CCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACT 988
|||||||||||||||||||||||||||||||||||||
Sbjct 1199 CGCCGTGTGGTTCGGAGGCTCCATGCTGGCCTCGACTCCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACT 1272
Query 989 ATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCC------------------ 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1273 ATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCCTAGTGTCTGCCTGAACGC 1346
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1347 GTCGTTCGATGGTGTCACGTTGGGGAACAAGTGTCCTTCAGAACCCAGAGAAGGCCGCCGTTCTGTAAATAGCG 1420
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1421 ACGTCGGTGTTGCTGCCCAGCAGCGTGCTTGCATTGCCGGTGCATGAGGCGCGGCGCGGGCCCTTCAGTAAAAG 1494
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1495 CCATTTATCCGTGTGCCGACCGCTGTCTGCCAGCCTCCTCCTTCTCCCGCCCTCCTCACCCTCGCTCTCCCTCC 1568
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1569 TCCTCCTCCTCCGAGCTGCTAGCTGACAAATACAATTCTGAAGGAATCCAAATGTGACTTTGAAAATTGTTAGA 1642
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1643 GAAAACAACATTAGAAAATGGCGCAAAATCGTTAGGTCCCAGGAGAGAATGTGGGGGCGCAAACCCTTTTCCTC 1716
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1717 CCAGCCTATTTTTGTAAATAAAATGTTTAAACTTGAAATACAAATCGATGTTTATATTTCCTATCATTTTGTAT 1790
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1791 TTTATGGTATTTGGTACAACTGGCTGATACTAAGCACGAATAGATATTGATGTTATGGAGTGCTGTAATCCAAA 1864
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1865 GTTTTTAATTGTGAGGCATGTTCTGATATGTTTATAGGCAAACAAATAAAACAGCAAACTTTTTTGCCACATGT 1938
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 1939 TTGCTAGAAAATGATTATACTTTATTGGAGTGACATGAAGTTTGAACACTAAACAGTAATGTATGAGAATTACT 2012
Query 1045 -------------------------------------------------------------------------- 1044
Sbjct 2013 ACAGATACATGTATCTTTTAGTTTTTTTTGTTTGAACTTTCTGGAGCTGTTTTATAGAAGATGATGGTTTGTTG 2086
Query 1045 ----------------------------------------------------------------------- 1044
Sbjct 2087 TCGGTGAGTGTTGGATGAAATACTTCCTTGCACCATTGTAATAAAAGCTGTTAGAATATTTGTAAATATCT 2157
