Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03845
- Subject:
- NM_001077700.3
- Aligned Length:
- 1697
- Identities:
- 1094
- Gaps:
- 589
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGGGGCTTCTTCAGGCGGTGGCGGCAGCAGCGAAGGTGGCGGCGGCAGCAGCGGCAGCGGCTATGGTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTCGCTCGATTCTCCCAGTGCCTGGCTGAGTTTCGGACGTGGTTAAGAACCAACTGGTTGAGGTTCAATGCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACAAGACGGATGTGATGCTGCCATCTGTTGAATCTTCAAGTCCAGGAGGTTCAGCAACATCAGATGACCATGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTTGATCCATCAGCTGACATGCTGGTTCATGATTTTGATGATGAACGAACATTAGAAGAGGAAGAAATGATGGA 296
Query 1 ----------------------------------------------------ATGCCAATTCATGAACTTCTCA 22
||||||||||||||||||||||
Sbjct 297 AGGAGAAACAAACTTCAGCTCTGAAATAGAAGATCTTGCAAGGGAAGGCGACATGCCAATTCATGAACTTCTCA 370
Query 23 GCCTTTATGGTTATGGTAGTACTGTTCGACTACCTGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGT 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCTTTATGGTTATGGTAGTACTGTTCGACTACCTGAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGT 444
Query 97 GAAGATGATGAAGATGCTGATAATGATGACAACAGTGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGA 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAAGATGATGAAGATGCTGATAATGATGACAACAGTGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGA 518
Query 171 TTCATCAGGTCAGGAGGATGAAACTCAGTCTTCCAATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCC 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTCATCAGGTCAGGAGGATGAAACTCAGTCTTCCAATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCC 592
Query 245 AGGAAATAATCCGCCCACGTCGATGTAAATATTTTGATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGAT 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGAAATAATCCGCCCACGTCGATGTAAATATTTTGATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGAT 666
Query 319 GAAGATTATATTCCATCAGAAGACTGGAAAAAGGAGATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGT 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAGATTATATTCCATCAGAAGACTGGAAAAAGGAGATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGT 740
Query 393 TGGCATTTGTAGATACAAAGAAAATGAAAAAGTATATGAAAATGATGATCAGCTCCTGTGGGACCCTGAGTACT 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGGCATTTGTAGATACAAAGAAAATGAAAAAGTATATGAAAATGATGATCAGCTCCTGTGGGACCCTGAGTACT 814
Query 467 TACCAGAAGATAAAGTGATTATATTTCTTAAAGATGCATCTAGAAGAACAGGTGATGAGAAGGGTGTAGAAGCA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TACCAGAAGATAAAGTGATTATATTTCTTAAAGATGCATCTAGAAGAACAGGTGATGAGAAGGGTGTAGAAGCA 888
Query 541 ATTCCTGAAGGATCTCACATAAAAGACAATGAACAGGCTTTATATGAATTGGTTAAATGCAATTTTGATACAGA 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATTCCTGAAGGATCTCACATAAAAGACAATGAACAGGCTTTATATGAATTGGTTAAATGCAATTTTGATACAGA 962
Query 615 AGAAGCATTGAGAAGATTAAGATTTAATGTAAAAGCAGCTAGAGAGGAATTATCTGTTTGGACAGAGGAAGAGT 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AGAAGCATTGAGAAGATTAAGATTTAATGTAAAAGCAGCTAGAGAGGAATTATCTGTTTGGACAGAGGAAGAGT 1036
Query 689 GTAGAAATTTTGAACAAGGGCTGAAGGCCTATGGAAAGGATTTTCATTTGATTCAGGCTAATAAAGTCCGAACA 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GTAGAAATTTTGAACAAGGGCTGAAGGCCTATGGAAAGGATTTTCATTTGATTCAGGCTAATAAAGTCCGAACA 1110
Query 763 AGGTCAGTTGGTGAATGTGTAGCATTCTATTACATGTGGAAAAAATCTGAACGTTATGATTTCTTTGCTCAGCA 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGGTCAGTTGGTGAATGTGTAGCATTCTATTACATGTGGAAAAAATCTGAACGTTATGATTTCTTTGCTCAGCA 1184
Query 837 AACACGATTTGGAAAGAAGAAATATAATCTTCATCCTGGTGTAACGGATTACATGGATCGTCTTCTAGACGAAA 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AACACGATTTGGAAAGAAGAAATATAATCTTCATCCTGGTGTAACGGATTACATGGATCGTCTTCTAGACGAAA 1258
Query 911 GTGAAAGTGCTGCATCTAGTCGAGCACCATCCCCTCCCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAG 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GTGAAAGTGCTGCATCTAGTCGAGCACCATCCCCTCCCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAG 1332
Query 985 AAAGAAGATGGCACTGTAAGCACTGCTAATCAAAATGGAGTGTCATCTAATGGACCAGG------------CA- 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1333 AAAGAAGATGGCACTGTAAGCACTGCTAATCAAAATGGAGTGTCATCTAATGGACCAGGTGAAATATTAAACAA 1406
Query 1046 -----------------------TACTCCA--AATG--------------------------CTTCTTCCAGTT 1068
||| .|| |||| ||||.|.|||.|
Sbjct 1407 AGAGGAAGTAAAAGTTGAAGGGTTAC-ACATTAATGGACCAACAGGTGGAAATAAGAAACCACTTCATGCAGAT 1479
Query 1069 CAT------------TTTTCA-------------------------------GCC---ATCAGTTCAAGA---G 1093
|| ||.|.| ||| ||.|.|.||||| |
Sbjct 1480 -ATGGATACTAATGGTTATGAAACAGATAACCTTACCACTGACCCAAAACTTGCCCATATGACTGCAAGAAATG 1552
Query 1094 CCAATGCCTTT--TTAAAA------------------------------------------------------- 1110
..||||..||| |.||||
Sbjct 1553 AAAATGATTTTGATGAAAAAAGTGAGAGACCTGCCAAAAGGCGAAGGGTAAACAGCAATGGAAAAGAAAGTCCA 1626
Query 1111 --------------------------------------------------------------------- 1110
Sbjct 1627 GGTTCTTCTGAATTTTTCCAAGAAGCAGTCTCACATGGGAAATTTGAAGAACTTGAAAACACAGATGAC 1695
