Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03845
- Subject:
- XM_006503398.2
- Aligned Length:
- 1735
- Identities:
- 994
- Gaps:
- 629
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGTAGTTTCCGCCCCGCCCCTCCCCGGTCTTTCGGCCTTCGCGGTGGCGGCGGCGGCGCCCAATCTTCGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTTCCGCGGCGCGCCGGGATTACGCTGCGGAATGGTGTGGTGGCTCGATTCTCCCAGTGCCTGGCTGAGTTTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGACGTGGTTAAGAACCAACTGGTTGAGGTTCAATGCAGACAAGACGGATGTGATGCTGCCATCTGTTGAGTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCAAGTCCAGGAGGCTCAGCAACATCAGAGGACCATGAGTTTGATCCATCAGCTGACATGCTGGTTCATGATTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGATGATGAGCGAACATTAGAAGAAGAAGAAATGATGGAAGGAGAGACAAACTTCAGTTCTGAAATAGAGGATC 370
Query 1 -----------------ATGCCAATTCATGAACTTCTCAGCCTTTATGGTTATGGTAGTACTGTTCGACTACCT 57
||||||||.||.||.||.||||||||.||||||||||..||.||||||||..|||||
Sbjct 371 TTGCGAGGGAAGGCGACATGCCAATCCACGAGCTGCTCAGCCTCTATGGTTATGACAGCACTGTTCGGTTACCT 444
Query 58 GAAGAAGATGAGGAAGAGGAAGAAGAGGAAGAAGAAGGTGAAGATGATGAAGATGCTGATAATGATGACAACAG 131
||.||| |||||.||||||||.|||||.||.|||||||||||||||||||||||||||||||||||.|||||
Sbjct 445 GAGGAA---GAGGAGGAGGAAGAGGAGGAGGAGGAAGGTGAAGATGATGAAGATGCTGATAATGATGATAACAG 515
Query 132 TGGCTGTAGTGGGGAAAATAAAGAGGAGAATATAAAGGATTCATCAGGTCAGGAGGATGAAACTCAGTCTTCCA 205
||||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 516 TGGCTGTAGTGGAGAAAATAAAGAAGAGAATATAAAGGATTCATCGGGTCAGGAGGATGAAACTCAGTCTTCCA 589
Query 206 ATGATGATCCATCACAATCTGTTGCTTCTCAAGATGCCCAGGAAATAATCCGCCCACGTCGATGTAAATATTTT 279
||||||||||.|||||.||||||.||||.||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 590 ATGATGATCCCTCACAGTCTGTTACTTCCCAAGATGCTCAGGAAATAATCCGCCCACGTCGATGTAAATATTTT 663
Query 280 GATACAAATAGTGAAGTAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCATCAGAAGACTGGAAAAAGGA 353
|||||||||||||||.|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 664 GATACAAATAGTGAAATAGAAGAAGAATCTGAAGAAGATGAAGATTATATTCCCTCAGAAGACTGGAAAAAGGA 737
Query 354 GATTATGGTGGGCTCCATGTTTCAAGCAGAAATTCCAGTTGGCATTTGTAGATACAAAGAAAATGAAAAAGTAT 427
.||.|||||||||||||||||||||||.||.|||||||||||..||||||||||||||||||||||||||||.|
Sbjct 738 AATCATGGTGGGCTCCATGTTTCAAGCTGAGATTCCAGTTGGTGTTTGTAGATACAAAGAAAATGAAAAAGTGT 811
Query 428 ATGAAAATGATGATCAGCTCCTGTGGGACCCTGAGTACTTACCAGAAGATAAAGTGATTATATTTCTTAAAGAT 501
|||||||||||||||||||.||||||||.||.||||..|||||||||||.||||||.||.|.||||||||.|||
Sbjct 812 ATGAAAATGATGATCAGCTTCTGTGGGATCCAGAGTGTTTACCAGAAGAGAAAGTGGTTGTCTTTCTTAAGGAT 885
Query 502 GCATCTAGAAGAACAGGTGATGAGAAGGGTGTAGAAGCAATTCCTGAAGGATCTCACATAAAAGACAATGAACA 575
||.||||||||.|||||.||||||||.|||||.||||||||.||||||||.||.||.||.|||||||||||.||
Sbjct 886 GCGTCTAGAAGGACAGGGGATGAGAAAGGTGTGGAAGCAATCCCTGAAGGCTCGCATATCAAAGACAATGAGCA 959
Query 576 GGCTTTATATGAATTGGTTAAATGCAATTTTGATACAGAAGAAGCATTGAGAAGATTAAGATTTAATGTAAAAG 649
||||||||||||.|||||||||||||..||||||||.||||||||.|||||||||.|.|||||||||||.||||
Sbjct 960 GGCTTTATATGAGTTGGTTAAATGCAGCTTTGATACGGAAGAAGCCTTGAGAAGACTGAGATTTAATGTCAAAG 1033
Query 650 CAGCTAGAGAGGAATTATCTGTTTGGACAGAGGAAGAGTGTAGAAATTTTGAACAAGGGCTGAAGGCCTATGGA 723
|||||.|||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1034 CAGCTCGAGAGGAGTTATCTGTGTGGACAGAGGAAGAGTGTAGAAATTTTGAGCAAGGGCTGAAGGCCTATGGA 1107
Query 724 AAGGATTTTCATTTGATTCAGGCTAATAAAGTCCGAACAAGGTCAGTTGGTGAATGTGTAGCATTCTATTACAT 797
||.|||||||||.||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1108 AAAGATTTTCATCTGATTCAGGCTAATAAAGTCCGAACAAGATCAGTTGGTGAATGTGTAGCATTCTATTACAT 1181
Query 798 GTGGAAAAAATCTGAACGTTATGATTTCTTTGCTCAGCAAACACGATTTGGAAAGAAGAAATATAATCTTCATC 871
|||||||||.|||||.||.||||||||||||||||||||||||.|.||||||||.|||||||||||||||||||
Sbjct 1182 GTGGAAAAAGTCTGAGCGCTATGATTTCTTTGCTCAGCAAACAAGGTTTGGAAAAAAGAAATATAATCTTCATC 1255
Query 872 CTGGTGTAACGGATTACATGGATCGTCTTCTAGACGAAAGTGAAAGTGCTGCATCTAGTCGAGCACCATCCCCT 945
|||||||||||||||||||||||||||||.|.||.|||||||||||||||||.|||||.||||||||||||||.
Sbjct 1256 CTGGTGTAACGGATTACATGGATCGTCTTTTGGATGAAAGTGAAAGTGCTGCTTCTAGCCGAGCACCATCCCCC 1329
Query 946 CCCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAGAAAGAAGATGGCACTGTAAGCACTGCTAATCAAAA 1019
||.||.|||||.|||||.||.||||||||||||||.|||||||||||||||.||||.||||.|...|||||.||
Sbjct 1330 CCTCCCACTGCCTCAAATAGCAGTAACAGCCAGTCCGAGAAAGAAGATGGCGCTGTCAGCAGTAGGAATCAGAA 1403
Query 1020 TGGAGTGTCATCTAATGGACCAGG---CATACTCCA----------------------------------AATG 1056
.||.||.||||||||||||||||| .|||||..| ||||
Sbjct 1404 CGGTGTCTCATCTAATGGACCAGGAGAAATACTAAACAAAGAAGAAGTAAAAGTTGAAGGGTTACATGTTAATG 1477
Query 1057 --------------------------CTTCTTCCAGTTCAT------------TTTTCA--------------- 1077
||||||.|||.| || ||.|.|
Sbjct 1478 GACCAACAGGTGGAAATAAGAAACCACTTCTTACAGAT-ATGGACACTAATGGTTATGAAGCAAATAACCTGAC 1550
Query 1078 ----------------GCC---ATCAGTTCAAGA---GCCAATGCCTTT--TTAAAA----------------- 1110
||| ||.|.|.||||| |..||||..||| |.||||
Sbjct 1551 CACTGACCCAAAACTTGCCCATATGACTGCAAGAAATGAAAATGATTTTGATGAAAAAAATGAGAGACCTGCCA 1624
Query 1111 -------------------------------------------------------------------------- 1110
Sbjct 1625 AAAGGCGGCGGATAAACAGCAGTGGGAAAGAAAGTCCGGGCTCATCTGAGTTTTTCCAGGAAGCAGTCTCACAT 1698
Query 1111 --------------------------------- 1110
Sbjct 1699 GGGAAGTTTGAGGAACATGAAAACACGAATGAC 1731
