Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_03875
• Subject: XM_006507151.3
• Aligned Length: 1321
• Identities: 863
• Gaps: 356

Alignment

Query    1  ATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGAAATT  74
            |||||||||||||||||.|||||||||||.|||||.|||||||||||||||||||||||.||||||||||||||
Sbjct    1  ATGCCTTATGTGGATCGACAGAATCGCATCTGTGGATTTCTAGACATTGAAGAAAATGAGAACAGTGGGAAATT  74

Query   75  TCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTAC  148
            |||||||.||||.|||||.|||||||||||||||||.||.||.||.||||||||||||||||||||||||||.|
Sbjct   75  TCTTCGACGGTATTTCATCCTGGATACCAGAGAAGACAGCTTTGTATGGTACATGGATAATCCACAGAACCTGC  148

Query  149  CTTCTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTAAGG  222
            ||||.|||||.|||||.||||||||||||||.||||||||||||||||||                        
Sbjct  149  CTTCAGGATCGTCACGGGTTGGAGCCATTAAACTTACCTACATTTCAAAG------------------------  198

Query  223  CCAAAGGCGGAGTTCTGTTTTGTTATGAATGCAGGAATGAGGAAGTACTTCCTACAAGCCAATGATCAGCAGGA  296
                                                                                      
Sbjct  199  --------------------------------------------------------------------------  198

Query  297  CCTAGTGGAATGGGTAAATGTGTTAAACAAAGCTATAAAAATTACAGTACCAAAGCAGTCAGACTCACAGCCTA  370
                                                          ||||||||||||||||||||||||||..
Sbjct  199  ----------------------------------------------GTACCAAAGCAGTCAGACTCACAGCCGG  226

Query  371  ATTCTGATAACCTAAGTCGCCATGGTGAATGTGGGAAAAAGCAAGTGTCTTACAGAACTGATATTGTTGGTGGC  444
            ..||.||.|.|||.||||||||.|||||.|||||.||.|||||||||||||||||||||||.|||||||||||.
Sbjct  227  CCTCCGACAGCCTGAGTCGCCAAGGTGACTGTGGTAAGAAGCAAGTGTCTTACAGAACTGACATTGTTGGTGGT  300

Query  445  GTACCCATCATTACTCCCACTCAGAAAGAAGAAGTAAATGAATGTGGTGAAAGTATTGACAGAAATAATCTGAA  518
            ||.||||||||.||.||.||.|||||||||||||||||.|||||||||||.|||.|.||.|||||.|||.||||
Sbjct  301  GTGCCCATCATCACGCCGACGCAGAAAGAAGAAGTAAACGAATGTGGTGAGAGTCTGGATAGAAACAATTTGAA  374

Query  519  ACGGTCACAAAGCCATCTTCCTTACTTTACTCCTAAACCACCTCAAGATAGTGCGGTTATCAAAGCTGGATATT  592
            |||||||||.||||||||||||||||||.|||||||.||||||..|||.|||||.||||||||||||||.||||
Sbjct  375  ACGGTCACAGAGCCATCTTCCTTACTTTGCTCCTAAGCCACCTTCAGACAGTGCAGTTATCAAAGCTGGGTATT  448

Query  593  GTGTAAAACAAGGAGCAGTGATGAAAAACTGGAAGAGAAGATATTTTCAATTGGATGAAAACACAATAGGCTAC  666
            ||||.||.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  449  GTGTGAAGCAAGGAGCGGTGATGAAAAACTGGAAGAGAAGATATTTTCAATTGGATGAAAACACAATAGGCTAC  522

Query  667  TTCAAATCTGAACTGGAAAAGGAACCTCTTCGTGTAATACCACTTAAAGAGGTTCATAAAGTCCAGGAATGTAA  740
            |||||||||||||||||.|||||||||||.||.||.||||||||||||||.||.||.|||||||||||.||.||
Sbjct  523  TTCAAATCTGAACTGGAGAAGGAACCTCTGCGGGTGATACCACTTAAAGAAGTGCACAAAGTCCAGGAGTGCAA  596

Query  741  GCAAAGCGACATAATGATGAGGGACAACCTCTTTGAAATTGTAACAACGTCTCGAACTTTCTATGTGCAGGCTG  814
            .||.||.|||||||||||||||||||||||.||||||||.||.||.||.|||||.|||||||||||||||||||
Sbjct  597  ACAGAGTGACATAATGATGAGGGACAACCTGTTTGAAATCGTGACGACATCTCGGACTTTCTATGTGCAGGCTG  670

Query  815  ATAGCCCTGAAGAGATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGCAGA  888
            |||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.|||||.
Sbjct  671  ATAGCCCTGAAGAGATGCACAGTTGGATTAAAGCAGTCTCTGGCGCCATCGTAGCACAGCGGGGACCTGGCAGG  744

Query  889  TCTGCGTCTTCT--------------------------------------------------------------  900
            ||..|.||||||                                                              
Sbjct  745  TCATCCTCTTCTGTTAACTCTAATCTTAGCTTTGCACTGTGTTCCAGATGCGGCAGGCCAGAAGGCTGTCGAAC  818

Query  901  --------------------------------------------GAGCATCCCCCCGGTCCTTCAGAATCCAAA  930
                                                        ||||||.||..|.|.|||||||||.|||||
Sbjct  819  CCTTGTATACAGAGGTATACATCAAGAGCTGGTGAATGCAGCACGAGCATTCCGGCTGGCCTTCAGAACCCAAA  892

Query  931  CACGCTTTCCGTCCTACC---AACGCAGCCACCGCCACCTCACATTCCACAGCCTCTCGCAGCAACTCTTTGGT  1001
            ..|.||.||||||||.||   ..|||||||||||   |||||||||||.||||||||||||||.|||||.||||
Sbjct  893  TTCACTGTCCGTCCTGCCGGGGCCGCAGCCACCG---CCTCACATTCCCCAGCCTCTCGCAGCCACTCTCTGGT  963

Query 1002  CTCAACCTTTACCATGGAGAAGCGAGGATTTTACGAGTCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTCC  1075
            ||||..||.|.|||||||||||||||||.|||||.|.|||||||||||||||||||||||||||||||||||||
Sbjct  964  CTCAGGCTGTGCCATGGAGAAGCGAGGAGTTTACCAATCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTCC  1037

Query 1076  AGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAGCTCTGTTAAGACCTCAAAGTAAAAATGGC  1149
            |||||||||||||||||||.|||||||||||||||||                                     
Sbjct 1038  AGACTGTCTCTCCAAGAGAGCCAGCTTCCAAAGTGAC-------------------------------------  1074

Query 1150  CCTCAGGAAAAAGATTGTGACCTAGTAGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTG  1212
                                                                           
Sbjct 1075  ---------------------------------------------------------------  1074