Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03880
- Subject:
- NR_045581.2
- Aligned Length:
- 3710
- Identities:
- 2271
- Gaps:
- 1439
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAATAGCACACAACCACTGTGAGCTGTATGCGATTCAGAAACCAAGACCAAATTTTGCTCACTTTCATTAAT 74
Query 1 ---------------------ATGACATCTGGTTCTGTCTTCTTCTACATCTTAATTTTTGGAAAATATTTTTC 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CAGTTGCTCAGATAGAAGGAAATGACATCTGGTTCTGTCTTCTTCTACATCTTAATTTTTGGAAAATATTTTTC 148
Query 54 TCATGGGGGTGGACAGGATGTCAAGTGCTCCCTTGGCTATTTCCCCTGTGGGAACATCACAAAGTGCTTGCCTC 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCATGGGGGTGGACAGGATGTCAAGTGCTCCCTTGGCTATTTCCCCTGTGGGAACATCACAAAGTGCTTGCCTC 222
Query 128 AGCTCCTGCACTGTAACGGTGTGGACGACTGCGGGAATCAGGCCGATGAGGACAACTGT--------------- 186
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGCTCCTGCACTGTAACGGTGTGGACGACTGCGGGAATCAGGCCGATGAGGACAACTGTGGTGAGTGAAGCCCC 296
Query 187 ---------GGAGACAACAATGGATGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAAAATGACTTC 251
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGCAGTCACGGAGACAACAATGGATGGTCTCTGCAATTTGACAAATATTTTGCCAGTTACTACAAAATGACTTC 370
Query 252 CCAATATCCTTTTGAGGCAGAAACACCTGAATGTTTGGTCGGTTCTGTGCCAGTGCAATGTCTTTGCCAAGGTC 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCAATATCCTTTTGAGGCAGAAACACCTGAATGTTTGGTCGGTTCTGTGCCAGTGCAATGTCTTTGCCAAGGTC 444
Query 326 TGGAGCTTGACTGTGATGAAACCAATTTACGAGCTGTTCCATCGGTTTCTTCAAATGTGACTGCAATGTCACTT 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGAGCTTGACTGTGATGAAACCAATTTACGAGCTGTTCCATCGGTTTCTTCAAATGTGACTGCAATGTCACTT 518
Query 400 CAGTGGAACTTAATAAGAAAGCTTCCTCCTGATTGCTTCAAGAATTATCATGATCTTCAGAAGCTGTACCTGCA 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAGTGGAACTTAATAAGAAAGCTTCCTCCTGATTGCTTCAAGAATTATCATGATCTTCAGAAGCTGTACCTGCA 592
Query 474 AAACAATAAGATTACATCCATCTCCATCTATGCTTTCAGAGGACTGAATAGCCTTACTAAACTGTATCTCAGTC 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAACAATAAGATTACATCCATCTCCATCTATGCTTTCAGAGGACTGAATAGCCTTACTAAACTGTATCTCAGTC 666
Query 548 ATAACAGAATAACCTTCCTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGATAATTGAAGAT 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATAACAGAATAACCTTCCTGAAGCCGGGTGTTTTTGAAGATCTTCACAGACTAGAATGGCTGATAATTGAAGAT 740
Query 622 AATCACCTCAGTCGAATTTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTAGTCCTGATGAATAA 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AATCACCTCAGTCGAATTTCCCCACCAACATTTTATGGACTAAATTCTCTTATTCTCTTAGTCCTGATGAATAA 814
Query 696 CGTCCTCACCCGTTTACCTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGCTGGACCTTGAAGGCA 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CGTCCTCACCCGTTTACCTGATAAACCTCTCTGTCAACACATGCCAAGACTACATTGGCTGGACCTTGAAGGCA 888
Query 770 ACCATATCCATAATTTAAGAAATTTGACTTTTATTTCCTGCAGTAATTTAACTGTTTTAGTGATGAGGAAAAAC 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACCATATCCATAATTTAAGAAATTTGACTTTTATTTCCTGCAGTAATTTAACTGTTTTAGTGATGAGGAAAAAC 962
Query 844 AAAATTAATCACTTAAATGAAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAAGTAATAA 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAAATTAATCACTTAAATGAAAATACTTTTGCACCTCTCCAGAAACTGGATGAATTGGATTTAGGAAGTAATAA 1036
Query 918 GATTGAAAATCTTCCACCGCTTATATTCAAGGACCTGAAGGAGCTGTCACAATTGAATCTTTCCTATAATCCAA 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GATTGAAAATCTTCCACCGCTTATATTCAAGGACCTGAAGGAGCTGTCACAATTGAATCTTTCCTATAATCCAA 1110
Query 992 TCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTCTCAGCCTAGAAGGGATTGAAATT 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCCAGAAAATTCAAGCAAACCAATTTGATTATCTTGTCAAACTCAAGTCTCTCAGCCTAGAAGGGATTGAAATT 1184
Query 1066 TCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCCAGTACTG 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCAAATATCCAACAAAGGATGTTTAGACCTCTTATGAATCTCTCTCACATATATTTTAAGAAATTCCAGTACTG 1258
Query 1140 TGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAA 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGGTATGCACCACATGTTCGCAGCTGTAAACCAAACACTGATGGAATTTCATCTCTAGAGAATCTCTTGGCAA 1332
Query 1214 GCATTATTCAGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATG 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCATTATTCAGAGAGTATTTGTCTGGGTTGTATCTGCAGTTACCTGCTTTGGAAACATTTTTGTCATTTGCATG 1406
Query 1288 CGACCTTATATCAGGTCTGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGACTGCTTAAT 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CGACCTTATATCAGGTCTGAGAACAAGCTGTATGCCATGTCAATCATTTCTCTCTGCTGTGCCGACTGCTTAAT 1480
Query 1362 GGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATGCGCAGCTGT 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGGAATATATTTATTCGTGATCGGAGGCTTTGACCTAAAGTTTCGTGGAGAATACAATAAGCATGCGCAGCTGT 1554
Query 1436 GGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTTACTGTTA 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGCCATTCTGTCCACAGAAGTATCAGTTTTACTGTTA 1628
Query 1510 ACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAAC 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ACATTTCTGACATTGGAAAAATACATCTGCATTGTCTATCCTTTTAGATGTGTGAGACCTGGAAAATGCAGAAC 1702
Query 1584 AATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTT 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AATTACAGTTCTGATTCTCATTTGGATTACTGGTTTTATAGTGGCTTTCATTCCATTGAGCAATAAGGAATTTT 1776
Query 1658 TCAAAAACTACTATGGCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAG 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCAAAAACTACTATGGCACCAATGGAGTATGCTTCCCTCTTCATTCAGAAGATACAGAAAGTATTGGAGCCCAG 1850
Query 1732 ATTTATTCAGTGGCAATTTTTCTTGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTATGGAAGCAT 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ATTTATTCAGTGGCAATTTTTCTTGGTATTAATTTGGCCGCATTTATCATCATAGTTTTTTCCTATGGAAGCAT 1924
Query 1806 GTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGATGATCCTTG 1879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GTTTTATAGTGTTCATCAAAGTGCCATAACAGCAACTGAAATACGGAATCAAGTTAAAAAAGAGATGATCCTTG 1998
Query 1880 CCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATTTCTTTCA 1953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCAAACGTTTTTTCTTTATAGTATTTACTGATGCATTATGCTGGATACCCATTTTTGTAGTGAAATTTCTTTCA 2072
Query 1954 CTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTT 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CTGCTTCAGGTAGAAATACCAGGTACCATAACCTCTTGGGTAGTGATTTTTATTCTGCCCATTAACAGTGCTTT 2146
Query 2028 GAACCCAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGAC 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GAACCCAATTCTCTATACTCTGACCACAAGACCATTTAAAGAAATGATTCATCGGTTTTGGTATAACTACAGAC 2220
Query 2102 AAAGAAAATCTATGGACAGCAAAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTG 2175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AAAGAAAATCTATGGACAGCAAAGGTCAGAAAACATATGCTCCATCATTCATCTGGGTGGAAATGTGGCCACTG 2294
Query 2176 CAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGATTTCTCAATC 2249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CAGGAGATGCCACCTGAGTTAATGAAGCCGGACCTTTTCACATACCCCTGTGAAATGTCACTGATTTCTCAATC 2368
Query 2250 AACGAGACTCAATTCCTATTCA---------------------------------------------------- 2271
||||||||||||||||||||||
Sbjct 2369 AACGAGACTCAATTCCTATTCATGACTGACTCTGAAATTCATTTCTTCGCAGAGAATACTGTGGGGGTGCTTCA 2442
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2443 TGAGGGATTTACTGGTATGAAATGAATACCACAAAATTAATTTATAATAATAGCTAAGATAAATATTTTACAAG 2516
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2517 GACATGAGGAAAAATAAAAATGACTAATGCTCTTACAAAGGGAAGTAATTATATCAATAATGTATATATATTAG 2590
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2591 TAGACATTTTGCATAAGAAATTAAGAGAAATCTACTTCAGTAACATTCATTCATTTTTCTAACATGCATTTATT 2664
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2665 GAGTACCCACTACTATGTGCATAGCATTGCAATATAGTCCTGGAAGTAGACAGTGCAGAACCTTTCAATCTGTA 2738
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2739 GATGGTGTTTAATGACAAAAGACTATACAAAGTCCATCTGCAGTTCCTAGTTTAAAGTAGAGCTTTACCTGTCA 2812
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2813 TGTGCATCAGCAAGAATCATAGGCACTTTTAAATAAAGGTTTAAAGTTTTGGAATACTCAGTGTATTTGCATCA 2886
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2887 TAGAAAATGTCTGACTGTTTGCAAAATAATATTCTGTTTTAAGAATCCATCTTACCTCTCTTTAAGTTTCCATA 2960
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 2961 CACTTGAGAGCCAACACAACATATTTATTACTAAAAAGATGCTTTGCTAGAAACTCAAAAACAGCACTTCTTTT 3034
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3035 GGCACTTCCTGCCCAGTTTTCTCTTTGCTTTAAATGAACATCATCATATGGAATTGGAATAGGAGAGTATGAGT 3108
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3109 ACGGCAGAGAAGTGGATCAGAAAAACTAGAATGAGGATAAACATTTACATTAGTGGAAACTCCTGAAATAAATC 3182
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3183 CTTGTATTGTCAGTTAACTGATTTTCAACAAGGATGCCAAGACAAAAAGGCTTTTCAACAAACCGTGCTGTTTT 3256
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3257 AAGAACAGACCTAAGTGGTTTAATTCACCCACTTTAGATGGGTGAATGTTATGGTGTGTGAAATATCTCAGTAA 3330
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3331 AGCAGTTAAAAGGAAAAAGAGCTGGAATGCACTGATTCAGGAACTTAATTTCAGGAAGGAAAGGTCTGTATGTA 3404
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3405 CACATTTCACTTTAAGCAGAAAATCTTTCTTCAAGAAATGACTTTACTTTCTCTTTGCACTGCCAGCACGTGAG 3478
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3479 ATACTAACTTTTTAACTAGTTGTTCTTCTCTAGTCTCTACGTTATTAGAATTTTTTGCTTTCATAATGTGAAAC 3552
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3553 CTTTAAGCAGGAGAAGAAAATGTTTTCAGATAGTTTCAAATACACCAAAAATGTTTGAAACACAAAAATACTGG 3626
Query 2272 -------------------------------------------------------------------------- 2271
Sbjct 3627 AATCAAACCATAATGCACTTATTGAATATATAGTTGTATAGATTTGTTCTGAAAATAAATTATCTGAAATTTAA 3700
Query 2272 ---------- 2271
Sbjct 3701 CTATTAAAAA 3710
