Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_03889
Subject:
NM_001006666.2
Aligned Length:
1163
Identities:
269
Gaps:
871

Alignment

Query    1  ATGAAGCCTCACTTCAGAAACACAGTGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGCCTCACTTCAGAAACACAGTGGAGCGAATGTATCGAGACACATTCTCCTACAACTTTTATAATAGACC  74

Query   75  CATCCTTTCTCGTCGGAATACCGTCTGGCTGTGCTACGAAGTGAAAACAAAGGGTCCCTCAAGGCCCCCTTTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct   75  CATCCTTTCTCGTCGGAATACCGTCTGGCTGTGCTACGAAGTGAAAACAAAGGGTCCCTCAAGGCCCCGTTTGG  148

Query  149  ACGCAAAGATCTTTCGAGGCCAGGTGTATTCCGAACTTAAGTACCACCCAGAGATGAGATTCTTCCACTGGTTC  222
            ||||||||||||||||||||||||||                    |||||        .||||.||     ||
Sbjct  149  ACGCAAAGATCTTTCGAGGCCAGGTG--------------------CCCAG--------GTCTTTCA-----TC  189

Query  223  AGCAAGTGGAGGAAGCTGCATCGTGACCAGGAGTATGAGGTCACCTGGTACATATCCTGGAGCCCCTGCACAAA  296
            ||           |||..|||                  .|||..||.|       |.|.||||||        
Sbjct  190  AG-----------AGCCCCAT------------------TTCAAGTGCT-------CAGTAGCCCC--------  219

Query  297  GTGTACAAGGGATATGGCCACGTTCCTGGCCGA-------GGAC-CCGAAGGTTACCCTGACCATCTTTGTTGC  362
                        |.|||||| ||.|  |.||.|       |||| .||.||||        |||     ||   
Sbjct  220  ------------TTTGGCCA-GTGC--GCCCCACCACATGGGACAGCGCAGGT--------CCA-----GT---  262

Query  363  CCGCCTCTACTACTTCTGGGACCCAGATTACCAGGAGGCGCTTCGCAGCCTGTGTCAGAA-AAG--AGACGGTC  433
             .|||||              |||||.|.||            |||||.|.|    .||| |||  ||||   |
Sbjct  263  -GGCCTC--------------CCCAGCTGAC------------CGCAGGCAG----GGAACAAGGCAGAC---C  302

Query  434  CGCGTGCCACCATGAAGATCATGAATTATGACGAATTTCAGCACTGTTGGAGCAAGTTCGTGTACAGCCAAAGA  507
            |                                                                         
Sbjct  303  C-------------------------------------------------------------------------  303

Query  508  GAGCTATTTGAGCCTTGGAATAATCTGCCTAAATATTATATATTACTGCACATCATGCTGGGGGAGATTCTCAG  581
                                                                                      
Sbjct  304  --------------------------------------------------------------------------  303

Query  582  ACACTCGATGGATCCACCCACATTCACTTTCAACTTTAACAATGAACCTTGGGTCAGAGGACGGCATGAGACTT  655
                                                                                      
Sbjct  304  --------------------------------------------------------------------------  303

Query  656  ACCTGTGTTATGAGGTGGAGCGCATGCACAATGACACCTGGGTCCTGCTGAACCAGCGCAGGGGCTTTCTATGC  729
                                                                                      
Sbjct  304  --------------------------------------------------------------------------  303

Query  730  AACCAGGCTCCACATAAACACGGTTTCCTTGAAGGCCGCCATGCAGAGCTGTGCTTCCTGGACGTGATTCCCTT  803
                                                                                      
Sbjct  304  --------------------------------------------------------------------------  303

Query  804  TTGGAAGCTGGACCTGGACCAGGACTACAGGGTTACCTGCTTCACCTCCTGGAGCCCCTGCTTCAGCTGTGCCC  877
                                                                                      
Sbjct  304  --------------------------------------------------------------------------  303

Query  878  AGGAAATGGCTAAATTCATTTCAAAAAACAAACACGTGAGCCTGTGCATCTTCACTGCCCGCATCTATGATGAT  951
                                                                                      
Sbjct  304  --------------------------------------------------------------------------  303

Query  952  CAAGGAAGATGTCAGGAGGGGCTGCGCACCCTGGCCGAGGCTGGGGCCAAAATTTCAATAATGACATACAGTGA  1025
                                                                                      
Sbjct  304  --------------------------------------------------------------------------  303

Query 1026  ATTTAAGCACTGCTGGGACACCTTTGTGGACCACCAGGGATGTCCCTTCCAGCCCTGGGATGGACTAGATGAGC  1099
                                                                                      
Sbjct  304  --------------------------------------------------------------------------  303

Query 1100  ACAGCCAAGACCTGAGTGGGAGGCTGCGGGCCATTCTCCAGAATCAGGAAAAC  1152
                                                                 
Sbjct  304  -----------------------------------------------------  303

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