Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_03932
• Subject: XM_006534197.3
• Aligned Length: 1189
• Identities: 677
• Gaps: 422

Alignment

Query    1  ATGCTCCCCTCTTTGCAGGAGTCGATGGATGGAGATGAAAAGGAACTAGAGAGCAGCGAAGAGGGAGGCTCAGC  74
            ||||||||.|||||||||||.|||.|||||||.|||||||||||.||.|||||||||||||||||.|||||.||
Sbjct    1  ATGCTCCCGTCTTTGCAGGAATCGCTGGATGGGGATGAAAAGGAGCTGGAGAGCAGCGAAGAGGGTGGCTCCGC  74

Query   75  CGAGGAGCGGAGACTCGAGCCGCCGTCCAGCAGCCACTACTGTCTTTACAGCTATCGCGGAAGCAGATTGGCAC  148
            .|||||||||||||||||||||||..||||||||||||||||.||.|||||||..|||||||||||||||.|||
Sbjct   75  GGAGGAGCGGAGACTCGAGCCGCCTCCCAGCAGCCACTACTGCCTGTACAGCTTCCGCGGAAGCAGATTGACAC  148

Query  149  AGCAACGAGGGGACAGTGAGGACGGAAGCCCAAGTGGCACAAATGCAGAAACTCCCTCTGGTGATGATTTCAGC  222
            ||.|.||||||||.|||||.||.|||.|..||.||||||.||||||||||||.|||||||||||||||||||||
Sbjct  149  AGAATCGAGGGGATAGTGATGATGGACGTTCAGGTGGCATAAATGCAGAAACCCCCTCTGGTGATGATTTCAGC  222

Query  223  CTCTCCTTGGCAGATACTAATCTACCATCCGAAGTGGAGCCAGAGCTGCGCAGTTTCATTGCTAAGCGTCTTT-  295
            ||||||||||..|||||||||||||||||.|||||||||||.||.||.||||||||||||||||||||||||| 
Sbjct  223  CTCTCCTTGGTGGATACTAATCTACCATCTGAAGTGGAGCCGGAACTTCGCAGTTTCATTGCTAAGCGTCTTTC  296

Query  296  CAAGAGGTGCAGTCTTTGAAGGGCTGGGTAATGTTGCATCTGTGGAGCTAAAAATTCCAGGTTACCGAGTTGGT  369
            |||| ||.||.||||||||||||||||||||||||||||||||.|||||.|.||||||||||||||||||||||
Sbjct  297  CAAG-GGAGCGGTCTTTGAAGGGCTGGGTAATGTTGCATCTGTAGAGCTGAGAATTCCAGGTTACCGAGTTGGT  369

Query  370  TGTTATTACTGCCTTTTCCAAAATGAAAAACTGCTTCCTGAAACAGTAACGATAGACTCTGAACGTAACCCTTC  443
            |||||||||||||||||||||.|.|||||||||||||||||||.||.|.|.||.||.|||||||.|||||||||
Sbjct  370  TGTTATTACTGCCTTTTCCAACAGGAAAAACTGCTTCCTGAAATAGCAGCAATGGAATCTGAACATAACCCTTC  443

Query  444  AGAATATGTGGTCTGTTTTTTAGGAGGGTCTGAAAAAGGACTTGAGCTTTTCAGGCTTGAATTGGACAAGTACA  517
            .||||||||||||||.||.||||||||.||||||||||||||.||||||||||||||||||.||||||||||.|
Sbjct  444  TGAATATGTGGTCTGCTTCTTAGGAGGCTCTGAAAAAGGACTGGAGCTTTTCAGGCTTGAACTGGACAAGTATA  517

Query  518  TTCAAGGGCTGAAAAATAACATGAATTGTGAGGCAAGGGGCCTGGAGAGTCACATAAAATCCTATCTGAGCAGC  591
            |||||||||||||.|||||||||||||||||||.||||.|.||||.||.|.|..||||.||||||||||..|||
Sbjct  518  TTCAAGGGCTGAAGAATAACATGAATTGTGAGGAAAGGAGTCTGGGGAATGATGTAAAGTCCTATCTGAATAGC  591

Query  592  TGGTTTGAGGATGTTGTATGCCCAATCCAAAGGGTTGTTCTTCTCTTTCAGGAAAAGCTTACCTTTCTGCTACA  665
            ||||.|||||||||.||.||.||.|||||||||||.|||||.|||||||||||.||.||.|||||||||||.||
Sbjct  592  TGGTATGAGGATGTGGTGTGTCCCATCCAAAGGGTGGTTCTCCTCTTTCAGGAGAAACTGACCTTTCTGCTCCA  665

Query  666  TGCTGCTTTGAGTTACACTCCTGTTGAAGTTAAAGAATCAGATGAAAAAACAAAGAGAGACATTAACAGGTTTC  739
            ||||                                                                      
Sbjct  666  TGCT----------------------------------------------------------------------  669

Query  740  TGAGTGTGGCCAGTCTTCAAGGACTTATTCATGAAGGCACCATGACTTCTTTGTGCATGGCCATGACAGAGGAG  813
                                                                                      
Sbjct  670  --------------------------------------------------------------------------  669

Query  814  CAGCATAAGTCTGTGGTCATCGATTGCAGCAGCTCCCAGCCTCAGTTCTGCAATGCAGGAAGTAACCGGTTTTG  887
                                                                      ||||.|||||.|||||
Sbjct  670  ----------------------------------------------------------GAAGCAACCGTTTTTG  685

Query  888  TGAGGATTGGATGCAAGCTTTTTTAAATGGTGCCAAAGGAGGTAACCCTTTTCTTTTCCGACAAGTACTGGAGA  961
            ||||||.||||||||||||||.|||.|.|||||..|||..||||||||||||||||||.|||||||.|||||.|
Sbjct  686  TGAGGACTGGATGCAAGCTTTCTTACACGGTGCTGAAGCCGGTAACCCTTTTCTTTTCAGACAAGTCCTGGAAA  759

Query  962  ACTTTAAACTAAAGGCCATACAAGACACAAACAATTTGAAGAGATTTATCCGACAGGCAGAAATGAATCATTAT  1035
            |||||||||                                                                 
Sbjct  760  ACTTTAAAC-----------------------------------------------------------------  768

Query 1036  GCTTTGTTTAAATGTTACATGTTCCTAAAGAACTGTGGTAGTGGAGATATACTTTTGAAGATTGTTAAAGTGGA  1109
                                                                                      
Sbjct  769  --------------------------------------------------------------------------  768

Query 1110  ACATGAAGAAATGCCTGAAGCCAAAAATGTGATAGCTGTCCTTGAAGAATTCATGAAAGAAGCTCTTGACCAAA  1183
                                                                                      
Sbjct  769  --------------------------------------------------------------------------  768

Query 1184  GTTTT  1188
                 
Sbjct  769  -----  768