Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_03953
- Subject:
- NR_135247.2
- Aligned Length:
- 4148
- Identities:
- 519
- Gaps:
- 3629
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGGAAGTGGAACCTGGCTCTGGGGAGAAGCCGCGTGAGATCCGCGCGGGTGCTAGCTAGTCCTTTCTCGTCG 74
Query 1 -----------------------------------------------ATGCCCATGAAGGGCCGCTTCCCCATC 27
|||||||||||||||||||||||||||
Sbjct 75 CTGCTCGGCTCGCGGCCCGTGGGGTCGGCCCCGCCACCGTTGCCGCCATGCCCATGAAGGGCCGCTTCCCCATC 148
Query 28 CGCCGCACCCTGCAATATCTGAGCCAGGGGAACGTGGTGTTCAAGGACTCCGTGAAGGTCATGACAGTGAATTA 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCCGCACCCTGCAATATCTGAGCCAGGGGAACGTGGTGTTCAAGGACTCCGTGAAGGTCATGACAGTGAATTA 222
Query 102 CAACACGCATGGGGAGCTGGGCGAGGGCGCCAGGAAGTTTGTGTTTTTCAACATACCTCAGATTCAATACAAAA 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAACACGCATGGGGAGCTGGGCGAGGGCGCCAGGAAGTTTGTGTTTTTCAACATACCTCAGATTCAATACAAAA 296
Query 176 ACCCTTGGGTGCAGATCATGATGTTTAAGAACATGACGCCGTCACCCTTCCTGCGATTCTACTTAGATTCTGGG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ACCCTTGGGTGCAGATCATGATGTTTAAGAACATGACGCCGTCACCCTTCCTGCGATTCTACTTAGATTCTGGG 370
Query 250 GAGCAGGTCCTGGTGGATGTGGAGACCAAGAGCAATAAGGAGATCATGGAGCACATCAGAAAAATCTTGGGGAA 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAGCAGGTCCTGGTGGATGTGGAGACCAAGAGCAATAAGGAGATCATGGAGCACATCAGAAAAATCTTGGGGAA 444
Query 324 GAATGAGGAAACCCTCAGGGAAGAGGAGGAGGAGAAAAAGCAGCTTTCTCACCCAGCCAACTTCGGCCCTCGAA 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAATGAGGAAACCCTCAGGGAAGAGGAGGAGGAGAAAAAGCAGCTTTCTCACCCAGCCAACTTCGGCCCTCGAA 518
Query 398 AGTACTGCCTGCGGGAGTGCATCTGTGAAGTGGAAGGGCAGGTGCCCTGCCCCAGCCTGGTGCCATTACCCAAG 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGTACTGCCTGCGGGAGTGCATCTGTGAAGTGGAAGGGCAGGTGCCCTGCCCCAGCCTGGTGCCATTACCCAAG 592
Query 472 GAGATGAGGGGGAAGTACAAAGCCGCTCTGAAAGCCGATGCCCAGGAC-------------------------- 519
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAGATGAGGGGGAAGTACAAAGCCGCTCTGAAAGCCGATGCCCAGGACTAAGGCCCACGGTCACTGTGGGCTGG 666
Query 520 -------------------------------------------------------------------------- 519
Sbjct 667 GGTGATGGTGTCTGACCAGTGGGGAGATTGGAATGGGATTACTTTGGCCCAGGGAAGCCCCTGGTTCTGTCCCT 740
Query 520 -------------------------------------------------------------------------- 519
Sbjct 741 GGAGACTCTGGAAATCCTTTTGCATTAAAAGGACTTTACACACCTGTGTAAAAGGATGTGGGAGAGGAGGGTCT 814
Query 520 -------------------------------------------------------------------------- 519
Sbjct 815 GAAGCTGAGCTGCTAAATGAATATCCCTGCTCTGCTGGTCAATAAAACGCTTCCTAATAGCAGCTTGGCGTGTA 888
Query 520 -------------------------------------------------------------------------- 519
Sbjct 889 TCTGGTCCTAGTGAAGAGGAAGGCCTGTGTAGCAGAAAGGCTTTGGGCCTGAGAGGTTAAGGCCACAGCCTGTT 962
Query 520 -------------------------------------------------------------------------- 519
Sbjct 963 GACACCTGTTTTGGTCCTGCGACCCTTTACTGGTCTCCGCTGGCTTTGAATCTTCCTCTGGGCTCTACTCTGGA 1036
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1037 GAACATAAGGGCTGCTGTGGTTGAGTCTGGCTAGCACTGTCTGTGGTTGGCAGTGTGTACACCCCTCCGTTCAG 1110
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1111 TTCCTTGGGGGTATTTTTCAGAAATCCAAAGGCAACCCTTCGTGCAGTGCTCACTTTTTTAAGTACAGTTGATT 1184
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1185 ACCCTTGCCTGCTGGGGGGCCTAGCCATGGGCCAGAGATGGAGGAGCCCCAGTGGCTGACAGGCCAGCCTCACT 1258
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1259 CAGGCACGTACCTGCTGACCAGTCAGCCACTGCCAACCCATGGCCCAGCCACTGTGTGCATTAGCAGGGAGGTT 1332
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1333 TGTAGGCCATGGAGGAAATGAGGAGACACCACCTAGTGGAGACATTGGGGCCCTGCTGGGGGGATGGTGTCTAT 1406
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1407 AGCTGGCTCTGCTGGCTCCCTCAGGCCCTGCTTACCAAGCTCTGGAGGAGGGAGTGCTGCATTACTGAGCACCT 1480
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1481 TCCTTGTTCTTTCCTCATAGGACACTGATGTTACTGTCACTTTAGTTATGCTAAAGTGGAGGTTTCAGCCTCCA 1554
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1555 GAAGACAGCAGAGCCTTCTAGGGTCACCTTAAGAATAGGTTTAGCTAGGCTGGGTGTGGTGGCTCATGCCTGTA 1628
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1629 ATCCCAGCACTTTGGGAGGCTGATGTGGGCGGATAGTTGAGCCCAGGAGTTCGAGACCAGCCTGGGCAACATGG 1702
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1703 CAAGACCTTGTCTCTACAAAAAGTACAAAAATTAGATGGGTGTGGTGTTTCGCGTCTGTAGTCCCAGCTATTTG 1776
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1777 GGAAGCTGAGGTGGGAGGATCTCGAGCCTGCGAGATCAAGGCTGCAGTGAATCATGATCGTGCGCTACTGCACT 1850
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1851 CCAGCCTGGGCCACAGAGCAAGACTGTCTCAAGAAAAAAAATTTTTTAAATAAGTTTAATTATAAAGTGAAGGA 1924
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1925 CCAGTTGGACCACGGACCCCTAGAAACTCAGCCAAGGAGACCTGACTTTATCTGAGACAGGAAGGCAGTGGTTA 1998
Query 520 -------------------------------------------------------------------------- 519
Sbjct 1999 AAAGAATTAAAAAAGGACAGTGGTGCTTGACAGAGCAGGACTGAAGTTTTCATTCCTCTACCTGCTGGGGCCTT 2072
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2073 GGTCAAGTCCTAAAAGCTTTCCAGGTCTGTAACTGGTTTTGTCTGTAAAATGGGGAAAAGGTTACCTTTTCTGC 2146
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2147 CACATGAAGTAGCTGGCTGGTGAAATGATGTCATACTACGATGTGTTTCATTAACTGTTGGAGATTATCACATT 2220
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2221 AAATTGAGCAGATTTGGATCTTTTACATTTGATGCTCAAGTTTGATTCTGTACCAGATCTGGGTTTGGGGTGAT 2294
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2295 GGCTTGTCGGGGGTGGGAGGGGAAGGTGGGCAGAGACTGATGTATAATGGACAGGTGTTCCTTGAGTGACAGAC 2368
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2369 TTACAAAGGGAGTGTTTAATTGAAATCTAGCATCTTGTCTCTCTGCTATCAGCATTTTGGCTGGGTGGAAAAAG 2442
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2443 CTCTCCTCCACAGAGAGCCCTCCCATGTCTGCTGGTTTCAGTTCCCCACCCAACTGACTGAAGTCTTGACCTTG 2516
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2517 ATACCACCTGCCTGGGCGTTCTACTTGGCTGCAAGGGCTCTTCAGAAAGCACCTAGTTCCTTTTGGCTTTCATC 2590
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2591 TGCAGTGTAGGTCTCCATAGCTAGTGACACACAAAGCCTTATGAGAGTATTCCTTCCCTCTAGGGCCCAAAGAG 2664
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2665 GCTGCTAACCAGCAGGAATGTCCTGAACCAAAAGGAGTGGTGACCATTCTCTAGACAGAATAAATGTCTGGTCC 2738
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2739 CTAATGGGACAGATAACTAGGGTTTGAGTTCAGGCTTGACACAGGAGCAATGGGCAGTGAGGTGGACAGCCCAG 2812
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2813 ACCCTGAAAGGACGTGTGGAGACAGCAGCAGTCCTGTGGTGCAGTTACTGCCTGTGTGGCCAGCTTCACAGGCA 2886
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2887 GCAGATAATTTGTGGAAATAAACATTATTTTCTTTTTTTGTTCCCTGTAGGCTACTTGATCCTGGATAGTTTCT 2960
Query 520 -------------------------------------------------------------------------- 519
Sbjct 2961 CTTTAAACCTTTGTCTTTCCCTATTTTGTTTAGTAGTGATGAAAGATGGGTTTAAAATATACAGAAATGGGAGA 3034
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3035 AAATTAATTAGAGAAAATGTGAGGATTTTATAATTGATAACATGTTCTTAATTTTACTTGCACAAGCAGTGTTC 3108
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3109 ACAGCCTTATTCTGAAGTGACCACTTTTCTTCTCTTTGAGGCACTACCTGGCAGCACCATCTAAACCTGTATCA 3182
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3183 TCTGCTGTGGTCCCAGTTACTCAGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGGTTGAGGCTGGAGTG 3256
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3257 AGCCATGACTGTACCACTGCATTCCAGCCTGGGTGACGGAGTGAGGCCCTATCTGCCTGCCAGTGAGTTCTGTC 3330
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3331 ATGCATCAGACTTTGGACCTCAGAATTTTCACCTGGAACATGAGAGGTGTGTGGTTTGCGCTATAGACTGGCTC 3404
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3405 CGGTGATCTGGCCATTATACTCTGCTGTCTCCATCTTGAGGATGTAGGGGATTATGCTGTCTATCGAAACATTG 3478
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3479 CCAATGAGACCAGTAAAAAAAAGTTCTTCTGTTATGTTGGAGCTCATCAGCCTGAGTGCCGGCAGGCGAACGAG 3552
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3553 GATCCGGGCCAATCTATAAAAGGGAGTGTCATTAGAAAAGGAGACTGTTTGATGCCCTTCAACCACAGCTCAGC 3626
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3627 AAAGGCTCCTGGGGTCCCGTCTGTATTGCACAGAATCAAACCAAACGGATCCACCATCCACCCACCTCTCTTTT 3700
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3701 CTGATTTCAACAGTTCCTCTTATAGAAATTTATCATGAGAAAAAACCAAATGAGTACAAAATGTATGTACAGAT 3774
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3775 GTGTTCCCTTCACTCTTGTTTATTCCAACTCTCCTCACCCCCACCACCAAGAGAAAACCTGGAAATTCATCAAC 3848
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3849 AGAGGACAGACTAAAGTAGGAGTCTTCATATGATGAACTGCTAGAGACTCATTTAAAAAACGATAATACAAACC 3922
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3923 TGTATTTACTGACCAGGAAAGACATCCATGACATATTGCTCAATAAAAGTTTAAAAGGAGATTATAAAACAGCA 3996
Query 520 -------------------------------------------------------------------------- 519
Sbjct 3997 AGTATAGATGTGTATATAAAGTATTGGGAAAATGTTCACCACGCTAACAGTTGGGCTCTGGGTATTGGGATTTG 4070
Query 520 -------------------------------------------------------------------------- 519
Sbjct 4071 AGGTGATTTTTTCTTATTTTTTGTACTGCTCTAATTTCCAGTGTTCATTTAGCATTATAAATAAAGCAGTAAAA 4144
Query 520 ---- 519
Sbjct 4145 TAGC 4148
