Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04001
Subject:
NM_001305018.1
Aligned Length:
1133
Identities:
433
Gaps:
700

Alignment

Query    1  ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACCGATCCGTCGCTGGGGCTGACAGTCCCCATGGCGCCGCCTCTGGCCCCGCTCCCTCCCCGGGACCCAAA  74

Query   75  CGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTCCCGGGAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGGGGCGGGATCCGAGTGGAGAAAGCCCGGGGCCGTGAGCTTCGCCGACGTGGCCGTGTACTTCTCCCGGGAGG  148

Query  149  AGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGGGC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGCCACCTGGGC  222

Query  223  GCGCTCGGTGAGAGCCCCACCTGCTTGCCTGGGCCCTGCGCCTCCACAGGCCCTGCCGCGCCTCTGGGAGCTGC  296
            ||||||                                                                    
Sbjct  223  GCGCTC--------------------------------------------------------------------  228

Query  297  GTGTGGAGTTGGGGGCCCCGGGGCCGGGCAGGCGGCCTCCTCGCAGCGTGGGGTTTGCGTTCTTCTCCCCCAGG  370
                                                                                    ||
Sbjct  229  ------------------------------------------------------------------------GG  230

Query  371  AGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCGAACTGTGGGATCCGGCTGCCCAGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  231  AGTCGGAGGCAGCAAGCCGGCGCTCATCTCCTGGGTGGAGGAGAAGGCCGAACTGTGGGATCCGGCTGCCCAGG  304

Query  445  ATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACCCAGCAGATTCCAGAAACAAGGAAGAGGAAAGACAAAGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  305  ATCCGGAGGTGGCGAAGTGTCCGACAGAAGCGGACCCAGCAGATTCCAGAAACAAGGAAGAGGAAAGACAAAGG  378

Query  519  GAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGC-------------------  573
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct  379  GAAGGGACGGGAGCCCTGGAGAAGCCCGACCCTGTGGCCGCCGGGTCTCCTGGGCTGAAGGCTCCCCAAGCCCC  452

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  453  CTTTGCCGGGTTGGAGCAGCTGTCCAAGGCCCGGCGCCGGAGTCGCCCCCGCTTTTTTGCCCACCCCCCTGTCC  526

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  527  CCCGAGCTGACCAGCGTCACGGCTGCTACGTGTGCGGGAAGAGCTTCGCCTGGCGCTCCACACTGGTGGAGCAC  600

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  601  ATTTACAGCCACAGGGGCGAGAAGCCCTTCCACTGCGCAGACTGCGGCAAGGGCTTCGGCCACGCTTCCTCCCT  674

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  675  GAGCAAACACCGGGCCATCCATCGTGGGGAGCGGCCCCACCGCTGTCCCGAGTGTGGTCGGGCCTTCATGCGCC  748

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  749  GCACGGCGCTGACTTCTCACCTGCGCGTTCACACTGGCGAGAAGCCCTACCGCTGCCCGCAGTGTGGCCGCTGC  822

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  823  TTCGGCCTGAAGACCGGCATGGCCAAGCACCAATGGGTCCATCGGCCCGGGGGCGAGGGGCGTAGGGGCCGGCG  896

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  897  CCCTGGGGGGCTGTCTGTGACCCTGACTCCTGTCCGCGGGGACCTGGACCCGCCTGTGGGCTTCCAGCTGTATC  970

Query  574  -----------------------  573
                                   
Sbjct  971  CAGAGATATTCCAGGAATGTGGG  993