Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04020
- Subject:
- NR_144937.2
- Aligned Length:
- 1938
- Identities:
- 665
- Gaps:
- 1264
Alignment
Query 1 -----------------------ATGT---CTTTC----AAGAGGGAAGG--AGACGATTGGAGTCAACTCAAT 42
.||| ||||| ||.|...|||| |||| ||| .||.||
Sbjct 1 ACACTAAGTGAAGCTTCTCCATTCTGTAAGCTTTCCGGGAACATCCAAGGCAAGAC---TGG----CACCCA-- 65
Query 43 GTGCTCA--AAAAAAGAAGAGTCGGGGACCTCCTAGCCAGTTACATTCCAGAGGATGAGGCGCTGATGCTTCGG 114
||.|| |.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66 --GCACAGCAGAAAAGAAGAGTCGGGGACCTCCTAGCCAGTTACATTCCAGAGGATGAGGCGCTGATGCTTCGG 137
Query 115 GATGGACGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGCCCACCG 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 138 GATGGACGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGCCCACCG 211
Query 189 TGCAGGCAAGAAACATCTGTCCAGCTTGCAGCTTTTCTATGGCAAGAAGCAGCCGGGAAAGGAAAGAAAGCAGA 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 TGCAGGCAAGAAACATCTGTCCAGCTTGCAGCTTTTCTATGGCAAGAAGCAGCCGGGAAAGGAAAGAAAGCAGA 285
Query 263 ATCCAAAACATCAGAATGAATTGAGAAGGGAAGAAACCAAAGCTGAGGCTCCTCTGCTAACTCAGACACGACTT 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 ATCCAAAACATCAGAATGAATTGAGAAGGGAAGAAACCAAAGCTGAGGCTCCTCTGCTAACTCAGACACGACTT 359
Query 337 ATCACCCAGAGTGCTCTGCACAGAGCTCCCCACTATAACAGTTGCTGCCGCCGGAAGTACAGACCAGAAGCCCC 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 360 ATCACCCAGAGTGCTCTGCACAGAGCTCCCCACTATAACAGTTGCTGCCGCCGGAAGTA-----CAGAAGCCCC 428
Query 411 TGGTCCCTCTGTCTCCCTTTCCCCTATGCCACCCTCAGAGGTCAAACTCCAAAGTGGGAAGATCAGTAGGGAAC 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429 TGGTCCCTCTGTCTCCCTTTCCCCTATGCCACCCTCAGAGGTCAAACTCCAAAGTGGGAAGATCAGTAGGGAAC 502
Query 485 CTGAACCTGCGGCTGGCCCACAGGCCGAGGAGTCAGCAACTGTCTCAGCCCCTGCACCCATGAGCCCCACAAGA 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 503 CTGAACCTGCGGCTGGCCCACAGGCCGAGGAGTCAGCAACTGTCTCAGCCCCTGCACCCATGAGCCCCACAAGA 576
Query 559 AGACGAGCCCTGGACCATTATCTCACCCTTCGAAGCTCTGGATGGATCCCAGATGGACGAGGTCGATGGGTAAA 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 577 AGACGAGCCCTGGACCATTATCTCACCCTTCGAAGCTCTGGATGGATCCCAGATGGACGAGGTCGATGGGTAAA 650
Query 633 AGATGAAAATGTTGAGTTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGAC---------------- 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 AGATGAAAATGTTGAGTTTGACTCTGATGAGGAGGAACCACCTGATCTCCCCTTGGACTGATACCCTTTTCCCA 724
Query 691 -------------------------------------------------------------------------- 690
Sbjct 725 TTCATTCACAAATAAATTACAATGGGTGCTGAGAACTTAACTTTCCTTAAGTCTGGTTCCTTGTTGGATCTCAG 798
Query 691 -------------------------------------------------------------------------- 690
Sbjct 799 GATTTCAGATCTGTTCATTCTCATTCCAACTACTCCTTGCCTGCAAGGTACACAGCTCTCCACACTCCTTTTTT 872
Query 691 -------------------------------------------------------------------------- 690
Sbjct 873 TTTTTTTTTTTTTTTTGAGGCAGAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGGCACGATCTCGGCTCAC 946
Query 691 -------------------------------------------------------------------------- 690
Sbjct 947 TGCAAGCTCTGCCTCCCAGGTTCACGCCTTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCG 1020
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1021 CCACCATGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGAT 1094
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1095 CTCCTGACCTCGTGATCCGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCACCCAGC 1168
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1169 CACGGCTATCCATACTTCTAACCCCTCCCCCACCTCCTACCAAAGCCATGCCAAGCGTCAGCTGCATCAGCCTG 1242
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1243 GTGCCCTATTAATAAGACTGTCAAAAAGAGGTCTTTGCCCTTCATGTTGTCTGCCTGCTTCTCCACTACCACTC 1316
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1317 AAAGTCCTTTCCCCCTTCAAATCACATAAGGACTGCAGGTAGGCACTAGGGGGACCTGGCCACATCTGGAAACA 1390
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1391 GGGCTGTGGCTAAGTTCCCTGTGAAAGTAGAAGAGTCAAAAGGCATTGGCAGGGTTATGGGGAACACCAAGGGA 1464
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1465 GGGAACACCCCCACCTCCTCCTAGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTG 1538
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1539 GTGAACTGGCAGTAACCCTTGGGGGTTAGCGCCAAGATTCTCACCCCAAAGCCCAAGGAAGGAGGCAGGCAAAA 1612
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1613 TGGATAGAAGGGCTTTTATTTACAGGAAAGGAGGACAGATGAGGATTTAAGTGTCCAGTGCTCCCAGCGCTAGT 1686
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1687 TGGTAAAGGGAAATGCAGTGTTATCTCTTCTTTTGCTGGCGACCTGTAAAGGAGCAATATTAAACATAAGTGTT 1760
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1761 TGTTCCAGCTCCTGCTTTCTGCAAAGGCACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGT 1834
Query 691 -------------------------------------------------------------------------- 690
Sbjct 1835 GTCTTAGGCCACCTTACAGGCCCATCCCACATTAACAAAACAAAACAAGAAACCACACCACAAATAAAATTACG 1908
Query 691 -------------- 690
Sbjct 1909 ATACCTCTAAACAA 1922
