Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04033
- Subject:
- NR_036570.1
- Aligned Length:
- 3051
- Identities:
- 882
- Gaps:
- 2095
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCAGAGCACACCGGACTGCGTTTTTTCCGAACGCCAGCAGCAGGGTCAGAAGGGAGGTAGTCGCCCTCCGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCCTGGCGTGGATTCCGAGCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCCGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTACCAGGTAAAGCCCTATCACGGGGTCGGCGCCCCTCTCCGTGTGGAGCCCACCTGCATGTACTGGCTCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACATGCACGGCAGGAGCGGCGGCCCAGCACTCGGCACTGGCCACTTGCAGACAAGAAGACAAGAAAATGATTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAACAAAACGACCACTGAAAACAATGCCGGTGGCAAAACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCAAAGAAAGGGTCCCAAGTGGTACATCGTCATAGCTGGAAACAGTCAGAGCCACCAGCCAATGATCTTTTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATGCTGCGAAAGCTGCCAAAAGTGACATGCAGTGTGGCCATGAGGTCTGCCGGAAGTGACTTGTTGGTGTTATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCTGAGTTAAAATGTGAAGGGATTTTTTTTTTTCAGATTACTGAGAGTCTTCAGTTACTAGATCCAGACACGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGACTGCAGAGAAAGGCTGTGTGCATCCGCTGTCTACTCCACTGTCTCCTCTGCAGAGGCGGATTTCCCTGACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGACCATGTTGCAGGCCCACAGCTGCCTACAGAACCGTCCCAAAATATGGCAAAGAAACCTATTCTGAGCGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAGGGTCTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTGGACTCATCCTAAAGTGCTGGCCTCTCATTCCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCTGTGCACACCTCACGGCAAGGGCCAGCCTGTTTCCTCCCGGTCACCTCCAAATCTTGCTGCTTTTAATTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTCAGAGAAGGGAATCAGCCACTTTGTGCTCACCACCTCTGGGGAAGGTGTGAGAGGAGAGAAGGAAGTGGCT 962
Query 1 ---------------------------------ATGAGAACAGAGGCACAGGTGCCGGCCCTGCAGCCCCCAGA 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTTTGGCTGCTGACAACATGAAGACTTCCTGCGATGAGAACAGAGGCACAGGTGCCGGCCCTGCAGCCCCCAGA 1036
Query 42 ACCTGGACTGGAGGGGGCCATGGGGCACCGGACCCTGGTCCTGCCCTGGGTGCTGCTGACCTTGTGTGTCACTG 115
|||.||||||||||||||||||||||.|||||||||||.||||||||||||||||||||||.||.|||||||||
Sbjct 1037 ACCCGGACTGGAGGGGGCCATGGGGCGCCGGACCCTGGCCCTGCCCTGGGTGCTGCTGACCCTGCGTGTCACTG 1110
Query 116 CGGGGACCCCGGAGGTGTGGGTTCAAGTTCGGATGGAGGCCACCGAGCTCTCGTCCTTCACCATCCGTTGTGGG 189
|.|||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGGGACCCCGGAGGTGTGAGTACAAGTTCGGATGGAGGCCACCGAGCTCTCGTCCTTCACCATCCGTTGTGGG 1184
Query 190 TTCCTGGGGTCTGGCTCCATCTCCCTGGTGACTGTGAGCTGGGGGGGCCCCAACGGTGCTGGGGGGACCACGCT 263
|||||||.|||||||||||||||||||||||||||||||.|||||||||||.|.||||||||||||||||||||
Sbjct 1185 TTCCTGGAGTCTGGCTCCATCTCCCTGGTGACTGTGAGCAGGGGGGGCCCCGATGGTGCTGGGGGGACCACGCT 1258
Query 264 GGCTGTGTTGCACCCAGAACGTGGCATCCGGCAATGGGCCCCTGCTCGCCAGGCCCGCTGGGAAACCCAGAGCA 337
|||||||||||||||.||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGCTGTGTTGCACCCGGAACTTGGCATCCAGCAATGGGCCCCTGCTCGCCAGGCCCGCTGGGAAACCCAGAGCA 1332
Query 338 GCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTGCGCCAACACCACCTTCTGCTGCAAGTTTGCG 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCATCTCTCTCATCCTGGAAGGCTCTGGGGCCAGCAGCCCCTGCGCCAACACCACCTTCTGCTGCAAGTTTGCG 1406
Query 412 TCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGCCCAGCTCAGACCCAGGGCTCTCTGCCCCGCC 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1407 TCCTTCCCTGAGGGCTCCTGGGAGGCCTGTGGGAGCCTCCCGCCCAGCTCAGACCCAGGGCTCTCTGTCCCGCC 1480
Query 486 GACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTGGGGGTCTCAGGAGTCCTCCTCTTTGGCTGTG 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||
Sbjct 1481 GACTCCTGCCCCCATTCTGCGGGCAGACCTGGCCGGGATCTTGGGGGTCTCAGGAGTCCTTCTCTTTGACTGTG 1554
Query 560 TCTACCTCCTTCATCTGCTGCGCCGACATAAGCACCGCCCTGCCCCTAGGCTCCAGCCGTCCCGCACCAGCCCC 633
.|||||||||||||||||||.|||||||.|||||||||||||||||||||||||||||.||||.|||||||.||
Sbjct 1555 GCTACCTCCTTCATCTGCTGTGCCGACAGAAGCACCGCCCTGCCCCTAGGCTCCAGCCATCCCACACCAGCTCC 1628
Query 634 CAGGCACCGAGAGCACGAGCATGGGCACCAAGCCAGGCCTCCCAGGCTGCTCTTCACGTCCCTTATGCCACTAT 707
.||||||.|||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1629 TAGGCACTGAGAGCACGAGCATGGGCACCCAGCCAGGCCTCCCAGGCTGCTCTCCACGTCCCTTATGCCACTAT 1702
Query 708 CAACACCAGCTGCCGCCCAGCTACTTTGGACACAGCTCACCCCC-ATGGGGGGCCGTCCTGG--TGGGCGTCAC 778
|||||||||||||.|||||||||||||||||||||||||||||| |..|||||||||||||| |.|
Sbjct 1703 CAACACCAGCTGCTGCCCAGCTACTTTGGACACAGCTCACCCCCGACAGGGGGCCGTCCTGGCATAG------- 1769
Query 779 TCCCCACCCACGCT-----GCACACCGGCCCC----AGGG-------------------CCCTGCC----GCCT 820
|.|||| |.||.||.|..|| |||| |..|||| .|||
Sbjct 1770 --------CGCGCTGGCTAGGACTCCAGTACCGTGAAGGGAGGCAGTGAGAGCAGACATCTGTGCCTCATTCCT 1835
Query 821 G----------------------------GGCCTCCACACCCATC-----CCTGC---ACGTGG--CAGCTTTG 856
| |||.|||.|| ..||| ||||| |.|.|| || |
Sbjct 1836 GATCTCAAGGGGAAAGCAAGAACAAGGGAGGCTTCCTCA-GGATCTCGAACCTGCGGAAGGAGGACCA-----G 1903
Query 857 TCTCTGT-----TGAGAA-------TGGACTCTAC-GCTCAGGCAG--------GGGAG-------AGG----C 898
|||.||| ||..|| ||||| .||| |.|||||.|| ||.|| ||| |
Sbjct 1904 TCTGTGTACTTCTGCCAAGTCCAGCTGGAC-ATACAGATCAGGGAGGCTGTCGTGGCAGTCCATCAAGGGGACC 1976
Query 899 CTCCTCA-----------------------------CACTGGTC------CCGGCCT---CA-CTCT-----TT 928
|.||||| |||.||.| ||.|||| || |||| |.
Sbjct 1977 CACCTCACCATCACCCAGGCCCTCAGGCAGCCCCTCCACAGGGCCCCTCTCCTGCCTGGACAGCTCTGCTGGTC 2050
Query 929 TCCCTGACCCTCGGGG--GCCCAGGGCCATGGAAGGACCCTT-------------------------------- 968
||||.|.|||..||.| |..||.||||||||...|.|||.|
Sbjct 2051 TCCCCGTCCCCTGGAGAAGAACAAGGCCATGGGTCGGCCCCTGCTGCTGCCCCTGCTGCTCCTGCTGCAGCCGC 2124
Query 969 -AGGAGTTC---------GA------------------------------------------------------ 978
||.|.||| ||
Sbjct 2125 CAGCATTTCTGCAGCCTGGATTATGTGAACCGGCTCTTTCTGAACTGGACAGAGGGTCAGGAGAGCGGCTTCCT 2198
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2199 CAGGATCTCAAACCTGCGGAAGGAGGACCAGTCTGTGTATTTCTGCCGAGTCGAGCTGGACACCCGGAGATCAG 2272
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2273 GGAGGCAGCAGTTGCAGTCCATCAAGGGGACCAAACTCACCATCACCCAGGCTGTCACAACCACCACCACCTGG 2346
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2347 AGGCCCAGCAGCACAACCACCATAGCCGGCCTCAGGGTCACAGAAAGCAAAGGGCACTCAGAATCATGGCACCT 2420
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2421 AAGTCTGGACACTGCCATCAGGGTTGCATTGGCTGTCGCTGTGCTCAAAACTGTCATTTTGGGACTGCTGTGCC 2494
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2495 TCCTCCTCCTGTGGTGGAGGAGAAGGAAAGGTAGCAGGGCGCCAAGCAGTGACTTCTGACCAACAGAGTGTGGG 2568
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2569 GAGAAGGGATGTGTATTAGCCCCGGAGGACGTGATGTGAGACCCGCTTGTGAGTCCTCCACACTCGTTCCCCAT 2642
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2643 TGGCAAGATACATGGAGAGCACCCTGAGGACCTTTAAAAGGCAAAGCCGCAAGGCAGAAGGAGGCTGGGTCCCT 2716
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2717 GAATCACCGACTGGAGGAGAGTTACCTACAAGAGCCTTCATCCAGGAGCATCCACACTGCAATGATATAGGAAT 2790
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2791 GAGGTCTGAACTCCACTGAATTAAACCACTGGCATTTGGGGGCTGTTTATTATAGCAGTGCAAAGAGTTCCTTT 2864
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2865 ATCCTCCCCAAGGATGGAAAAATACAATTTATTTTGCTTACCATACACCCCTTTTCTCCTCGTCCACATTTTCC 2938
Query 979 -------------------------------------------------------------------------- 978
Sbjct 2939 AATCTGTATGGTGGCTGTCTTCTATGGCAGAAGGTTTTGGGGAATAAATAGCGTGAAATGCTGCTGACAAAAAA 3012
Query 979 ----------------- 978
Sbjct 3013 AAAAAAAAAAAAAAAAA 3029
