Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_04159
Subject:
XM_011532262.3
Aligned Length:
1141
Identities:
869
Gaps:
263

Alignment

Query    1  ATGGAGGGGAACAGGGATGAGGCTGAGAAATGTGTCGAGATCGCCCGGGAGGCCCTGAACGCCGGCAACCGCGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GAAGGCCCAGCGCTTCCTGCAGAAGGCCGAGAAGCTCTACCCACTGCCCTCGGCCCGCGCACTATTGGAAATAA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TTATGAAAAATGGAAGCACGGCTGGAAATAGCCCTCATTGCCGAAAACCATCAGGTAGTGGCGATCAAAGCAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCTAATTGCACAAAGGACA---GCACATCTGGTAGTGGTGAAGGTGGAAAAGGCTATACCAAAGAC-CAAGTAG  292
                        |.|||.|   |.|||| ||.|| ||| ||.||||||    .||.||||.||.|| ||     
Sbjct    1  ------------ATGGATATTGGAACAT-TGATA-TGG-GATGGTGGA----CCTGTACCTAACACACA-----  50

Query  293  ATGGAGTTCTCAGCATAAACAAATGTAAAAATTACTATGAAGTACTTGGAGTTACGAAAGATGCTGGTGATGAA  366
                         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   51  -------------CATAAACAAATGTAAAAATTACTATGAAGTACTTGGAGTTACGAAAGATGCTGGTGATGAA  111

Query  367  GATTTGAAAAAAGCTTATAGAAAGCTTGCTTTGAAGTTTCATCCAGACAAAAACCATGCACCTGGAGCAACAGA  440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  112  GATTTGAAAAAAGCTTATAGAAAGCTTGCTTTGAAGTTTCATCCAGACAAAAACCATGCACCTGGAGCAACAGA  185

Query  441  TGCTTTTAAAAAGATTGGAAATGCTTATGCTGTTTTAAGTAATCCAGAAAAGCGAAAACAGTATGACCTCACGG  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  186  TGCTTTTAAAAAGATTGGAAATGCTTATGCTGTTTTAAGTAATCCAGAAAAGCGAAAACAGTATGACCTCACGG  259

Query  515  GCAATGAAGAACAAGCATGTAACCACCAAAACAATGGCAGATTTAATTTCCATAGAGGTTGTGAAGCTGATATA  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  260  GCAATGAAGAACAAGCATGTAACCACCAAAACAATGGCAGATTTAATTTCCATAGAGGTTGTGAAGCTGATATA  333

Query  589  ACTCCAGAAGACTTGTTTAATATATTTTTTGGGGGTGGATTTCCTTCAGGTAGTGTACATTCTTTTTCAAATGG  662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  334  ACTCCAGAAGACTTGTTTAATATATTTTTTGGGGGTGGATTTCCTTCAGGTAGTGTACATTCTTTTTCAAATGG  407

Query  663  AAGAGCTGGTTATAGCCAACAACATCAGCATCGACATAGTGGACATGAAAGAGAAGAGGAAAGAGGAGATGGAG  736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  408  AAGAGCTGGTTATAGCCAACAACATCAGCATCGACATAGTGGACATGAAAGAGAAGAGGAAAGAGGAGATGGAG  481

Query  737  GTTTTTCTGTGTTTATCCAGCTGATGCCCATAATTGTATTGATCCTCGTGTCATTATTAAGCCAGTTGATGGTC  810
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  482  GTTTTTCTGTGTTTATCCAGCTGATGCCCATAATTGTATTGATCCTCGTGTCATTATTAAGCCAGTTGATGGTC  555

Query  811  TCTAATCCTCCTTATTCCTTATATCCCAGATCTGGAACTGGGCAAACTATTAAAATGCAAACAGAAAACTTGGG  884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  556  TCTAATCCTCCTTATTCCTTATATCCCAGATCTGGAACTGGGCAAACTATTAAAATGCAAACAGAAAACTTGGG  629

Query  885  TGTTGTTTATTATGTCAACAAGGACTTCAAAAATGAATATAAAGGAATGTTATTACAAAAGGTAGAAAAGAGTG  958
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  630  TGTTGTTTATTATGTCAACAAGGACTTCAAAAATGAATATAAAGGAATGTTATTACAAAAGGTAGAAAAGAGTG  703

Query  959  TGGAGGAAGATTATGTGACTAATATTCGAAATAACTGCTGGAAAGAAAGACAACAAAAAACAGATATGCAGTAT  1032
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  704  TGGAGGAAGATTATGTGACTAATATTCGAAATAACTGCTGGAAAGAAAGACAACAAAAAACAGATATGCAGTAT  777

Query 1033  GCAGCAAAAGTATACCGTGATGATCGACTCCGAAGGAAGGCAGATGCCTTGAGCATGGACAACTGTAAAGAATT  1106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  778  GCAGCAAAAGTATACCGTGATGATCGACTCCGAAGGAAGGCAGATGCCTTGAGCATGGACAACTGTAAAGAATT  851

Query 1107  AGAGCGGCTTACCAGTCTTTATAAAGGAGGA  1137
            |||||||||||||||||||||||||||||||
Sbjct  852  AGAGCGGCTTACCAGTCTTTATAAAGGAGGA  882

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