Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_04162
• Subject: NM_001115116.2
• Aligned Length: 1618
• Identities: 983
• Gaps: 617

Alignment

Query    1  ATGGCCTCCGCGGGCAGCACCGCTCGGCGGGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAGAAGGGAGAGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCCTCCGCGGGCAGCACCGCTCGGCGGGCGGGCTCCGGAAGCTGGCACTCAGAAAGGGGAGAAGGGAGAGG  74

Query   75  TGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGCTCGGCCGCAGCCAACTCCAAGTGGCTCCATGCAGCAGGCGAACAAAGTCTCCTTGAAGGCCACCTGGACTG  148

Query  149  ACGCGGAGTCCAAGCAGCCCAGCCAGCCCCTGCCCGACCTCGCAGACCACCTCAGTGCGCAGGCGACTGCCCTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACGCGGAGTCCAAGCAGCCCAGCCAGCCCCTGCCCGACCTCGCAGACCACCTCAGTGCGCAGGCGACTGCCCTC  222

Query  223  GCCAGGCCGCGCCGCCCTGCCTCGCTCACCCCGCCCCGCGCTGACCCCAGCCCCAGCAAGGAGTCCGACCAGAC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCAGGCCGCGCCGCCCTGCCTCGCTCACCCCGCCCCGCGCTGACCCCAGCCCCAGCAAGGAGTCCGACCAGAC  296

Query  297  GGCAATCGACCAGACGGCGATCGGGAGCTACTACCAGCTGTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGCAATCGACCAGACGGCGATCGGGAGCTACTACCAGCTGTTCGCAGCGGCTGTGGGCAACGTGGAATGGCTGC  370

Query  371  GATTCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCGACGACAAGGGCTTCACTGCCATCCACTTCGCCGCC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GATTCTGTCTGAACCAGAGCCTCAGGGAAATCCCCACCGACGACAAGGGCTTCACTGCCATCCACTTCGCCGCC  444

Query  445  CAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCTGCTGACCAACAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAATGGGGCAAGCTTGCATGCCTGCAGGTCCTGGTAGAGGAGTACAAGTTTCCCGTGGACCTGCTGACCAACAA  518

Query  519  TAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACACCACCGTGGCCCTCCCCTGCATCTACTACCTGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TAGCCAGACACCCCTGCACCTCGTCATCCACAGGGACAACACCACCGTGGCCCTCCCCTGCATCTACTACCTGC  592

Query  593  TGGAGAAAGGCGCAGACCTCAATGCTCAGACATGCAACGGCTCCACGCCCCTGCACCTGGCAGCCCGTGACGGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGGAGAAAGGCGCAGACCTCAATGCTCAGACATGCAACGGCTCCACGCCCCTGCACCTGGCAGCCCGTGACGGC  666

Query  667  TTGCTGGACTGTGTGAAGGTCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTGCTGGACTGTGTGAAGGTCCTGGTGCAGAGTGGCGCCAACGTCCATGCCCAAGATGCCATGGGCTACAAACC  740

Query  741  CATTGACTTCTGCAAAATATGGAACCACCGTGCCTGTGCCCGGTTCTTGAAGGATGCCATGTGGAAAAAGGACA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CATTGACTTCTGCAAAATATGGAACCACCGTGCCTGTGCCCGGTTCTTGAAGGATGCCATGTGGAAAAAGGACA  814

Query  815  AGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGATGTTCAAGAGCCAGCTGACCCTCATGGAGCACAACTAC  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGAAGGACTTTGCCCGTGAGATGACGAAAATGAAGATGTTCAAGAGCCAGCTGACCCTCATGGAGCACAACTAC  888

Query  889  CTGATTGAGTATCAAGGTCAAGGA---------------------TGC--------AGTG--------------  919
            |||||||||||||||    ||.||                     |||        ||||              
Sbjct  889  CTGATTGAGTATCAA----AAAGAGCACAAAATTCTCAGAGAAGCTGCTATCAGAAAGTGGCTCCACGGCAAGC  958

Query  920  TGCACTTCCCA--------TTTG--------------------------------CCTTTTCCCCCATCACACC  953
            ||||   ||||        |.||                                |||    |.|||..||.||
Sbjct  959  TGCA---CCCAGGCCACTCTCTGGTCTCCAATACCAAGCAAGCCCGGGCCACCGCCCT----CTCCAAGACCCC  1025

Query  954  AGAGACTCTCCTATGG--------------CAGGACATTTCTCTACTATCAGACTGTGGAT------------T  1001
            ||||      |.|.||              |||||..||.|.|..||      ||||||||            |
Sbjct 1026  AGAG------CAACGGGAATCGCAGCGTTCCAGGAGCTTCCACCCCT------CTGTGGATGCACGCCTGCAAT  1087

Query 1002  CCTTT-----------GGAGAAG---AAG----------GGAATTGTCTTTC----------------------  1029
            .|.||           |||||.|   |||          ||||  |.|   |                      
Sbjct 1088  GCATTCCACAGCCCACGGAGATGCCCAAGCCCATCTACAGGAA--GCC---CACGGTCAAGCGGCCCACAATGT  1156

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1157  GGAATGTTAGCAACAACCCCGCCAGACCCCCCACCACCCAGATCAGCCACTCGCAGGGCATCCGCCTGGGCGTG  1230

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1231  CATCCAGACCCCACTCCGGAGCACGACTTCAGCAGCTTCCTGGAGGTGAGGCCTGATGGGCACGGCGGTGCGCG  1304

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1305  GCTGCACACAGTGGACGGCCACTGGGTGGCGCCCGTGCCGCGGCTGCCTTTTGAGGTGCTGCTGCGCATGCTGT  1378

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1379  ACCCACGTGTATGGCCATACAGAATGAAGGTGCCCCAGGGCTTTTACCCCATCAGCATGAGGGAAGTGCCCAGG  1452

Query 1030  --------------------------------------------------------------------------  1029
                                                                                      
Sbjct 1453  AAGCGGCACCTGGGTGACAACACCTTCTGGACCGACACTCTGGCCATGAACCTGCGTGACACATTCGATGAAGC  1526

Query 1030  ----------------------------------------------------------------  1029
                                                                            
Sbjct 1527  CTTCCTGGCAGCTGTGCGATCTCATCAAGGACTCCCCACCCTGCCCTCCCCACAAACCAACCCA  1590