Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04170
- Subject:
- XR_001783192.1
- Aligned Length:
- 4289
- Identities:
- 658
- Gaps:
- 3576
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGCCGGCGTGCGCCTGCGCTCCAGCGGGCTGCGCGGAGGCGGCAAGGCGGCGCTGGGGGGCTGGCTCGGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCGGCGGCTGTTGCGGATGGGAGCGGGCCGGTTTGGCGCGCCTATGGAGCGCCAGGGCAGGGCTGCCGCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCAGCCGCGGTCGGCGAGTCTGCGGACTCGGAAGCGCGGAGGCGGGACCCGCTGAGGCGCCGGGCGAGTAGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGCGCCGTCGGGGTCCGGGGAGGCGGAGAGTGTGAGACGGGAGCGGCCCGGCTCTCTAGGCGGCTCCACCTCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCGGCCGCCCGCGCGCCGAAGGCCTCCGGAAGAGGCGGCCGCTTTTTCCATGGTTTGGCTTGGATATTGGAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACCTTGGTCAAGCTGGTTTATTTTGAACCTAAAGACATCACTGCTGAAGAAGAAAAGGAGGAAGTGGAGAGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAAAAGCATCCGGAAGTACCTGACCTCCAATGTGGCTTACGGATCCACAGGCATTCGGGACGTGCACCTTGAG 518
Query 1 ------------------------------------------------------------------ATGCCTGC 8
||||||||
Sbjct 519 CTGAAGGACCTGACTCTGTGTGGACGCAAAGGCAATCTGCACTTTATACGCTTTCCCACCCATGACATGCCTGC 592
Query 9 TTTTATTCAAATGGGCAGAGATAAAAACTTCTCGAGTCTCCACACTGTCTTTTGTGCCACTGGAGGTGGAGCGT 82
|||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||.|.|
Sbjct 593 TTTTATTCAGATGGGCAGAGATAAAAACTTCTCAAGTCTCCACACTGTCTTTTGTGCCACTGGAGGTGGATCAT 666
Query 83 ACAAATTTGAGCAGGATTTTCTCACAATAGGTGATCTTCAGCTTTGCAAACTGGATGAACTAGATTGCTTGATC 156
||||||||||||||||||||||||||||||||||.|||||||||.|.|||||||||||||||||||||||.||.
Sbjct 667 ACAAATTTGAGCAGGATTTTCTCACAATAGGTGACCTTCAGCTTCGAAAACTGGATGAACTAGATTGCTTAATA 740
Query 157 AAAGGAATTTTATACATTGACTCAGTCGGATTCAATGGACGGTCACAGTGCTATTACTTTGAAAACCCTGCTGA 230
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 741 AAAGGAATTTTATACATTGACTCAGTTGGATTCAATGGACGGTCACAGTGCTATTATTTTGAAAACCCTGCTGA 814
Query 231 TTCTGAAAAGTGTCAGAAGTTACCATTTGATTTGAAAAATCCGTATCCTCTGCTTCTGGTGAACATTGGCTCAG 304
|||||||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||.|||||||
Sbjct 815 TTCTGAAAAATGTCAGAAGTTACCATTTGATTTAAAAAATCCATATCCTCTGCTTCTGGTGAACATCGGCTCAG 888
Query 305 GGGTTAGCATCTTAGCAGTATATTCCAAAGATAATTACAAACGGGTCACAGGTACTAGTCTTGGAGGAGGAACT 378
|||||||||||||||||||.|||||||||||||||||.||..||||||||||.||.||||||||||||||||||
Sbjct 889 GGGTTAGCATCTTAGCAGTGTATTCCAAAGATAATTATAAGAGGGTCACAGGCACCAGTCTTGGAGGAGGAACT 962
Query 379 TTTTTTGGTCTCTGCTGTCTTCTTACTGGCTGTACCACTTTTGAAGAAGCTCTTGAAATGGCATCTCGTGGAGA 452
||.|||||||||||||||||||||||||||||||..||||||||||||||||||||.|||||||||||||||||
Sbjct 963 TTCTTTGGTCTCTGCTGTCTTCTTACTGGCTGTAGTACTTTTGAAGAAGCTCTTGAGATGGCATCTCGTGGAGA 1036
Query 453 TAGCACCAAAGTGGATAAACTAGTACGAGATATTTATGGAGGGGACTATGAGAGGTTTGGACTGCCAGGCTGGG 526
|||||||||||||||.|||.||||.|||||.|||||||||||.|||||||||||||||||..||||||||||||
Sbjct 1037 TAGCACCAAAGTGGACAAATTAGTTCGAGACATTTATGGAGGAGACTATGAGAGGTTTGGCTTGCCAGGCTGGG 1110
Query 527 CTGTGGCTTCAAGCTTTGGAAACATGATGAGCAAGGAGAAGCGAGAGGCTGTCAGTAAAGAGGACCTGGCCAGA 600
|||||||||||||
Sbjct 1111 CTGTGGCTTCAAG------------------------------------------------------------- 1123
Query 601 GCGACTTTGATCACCATCACCAACAACATTGGCTCAATAGCAAGAATGTGTGCCCTTAATGAAAACATTAACCA 674
|||||||||||
Sbjct 1124 ---------------------------------------------------------------AACATTAACCA 1134
Query 675 GGTGGTATTTGTTGGAAATTTCTTGAGAATTAATACGATCGCCATGCGGCTTTTGGCATATGCTTTGGATTATT 748
|||.||||||||.||.||||||.|||||.|.||.|||||.||.|||||||||.||||.|||||..|||||||.|
Sbjct 1135 GGTCGTATTTGTCGGCAATTTCCTGAGAGTCAACACGATTGCTATGCGGCTTCTGGCGTATGCGCTGGATTACT 1208
Query 749 GGTCCAAGGGGCAGTTGAAAGCACTTTTTTCGGAACACGAGGGTTATTTTGGAGCTGTTGGAGCACTCCTTGAG 822
||||||||||||||.||||||||||.|||||.||.||||||||.|||||||||||.||||||||||||||.|||
Sbjct 1209 GGTCCAAGGGGCAGCTGAAAGCACTGTTTTCCGAGCACGAGGGATATTTTGGAGCCGTTGGAGCACTCCTCGAG 1282
Query 823 CTGTTGAAGATCCCG----------------------------------------------------------- 837
|||||||||||.||.
Sbjct 1283 CTGTTGAAGATACCCTGACTTACCGAGAGGACTTCCTGAAACCTGCCACAGAGACATCTGTGGATTTTTTTGTT 1356
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1357 TTGTTTTGTTAAGAGACTCAAGTTTTATGATCGTGTACTACTCAAATCAGAGCAAGAAACAAATGTATTTTTCT 1430
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1431 AAGACATCAAGATAAATTCTTAAAATTTTGTCTAAGGACACCCCATCCCACCCCCGTCTAGGCAGTATGAGGAT 1504
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1505 TTGCTGTTTATAGGGTATTCTCAGGGCAGCGTTATTAACCCCTGAGGTGCTTTGGAATCCCAGCATCACCCACT 1578
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1579 TGGGCATACGTGGAGCTTTCTGGACTCCCACCAGCAGCTGACTGCTTGTCCTGTTGAAATGTATGTGAGAATCT 1652
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1653 AACCGCTTTCATCAGTATGCCTTGGAGGTCATCTTTCTTTGCGCGCTGGATCATGTTTAGCCTATGTTAACATA 1726
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1727 CTGAAAATGGGTTATTTCAAGCTTCTGAAAACTTGGCAGGATTGTTCTGCATCTGATGTTAAGAGATGGCCTGC 1800
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1801 ATTGTAGCTGAAGGCAAGGGTGGGCCTGTTCACAGCAGCCTTGGAGCTGGAATGGAGACCTCGAGCTCTGGCTG 1874
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1875 GGAAGGATTCTGCCATTCAGCCATGGGTTCTGGTGCCAGCTCTGGGGCAACAGAAGGCTCTTGTTGGTTTGGAC 1948
Query 838 -------------------------------------------------------------------------- 837
Sbjct 1949 TATGGGAACTAGGATTGGATTTGGCTGGCTAGCCTGCTTGATGGTTCTCAGTTCCCACAGGGATATAGTTGGCT 2022
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2023 TTTATTACATACTTTGGCCCATTAGGACTAAGGGTTCCATTGTGCTGGCAGCACAGTACACGGGGTGTTGCAGG 2096
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2097 GATGGTAGTTTTCCCTCCTGCTAATCCCTGCTTTGCTTCTGAGAGATCCTCAAAACTGCACTTTTATTAGAAAG 2170
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2171 TTTCTCCATCTGGGGCAGGGCTGTGTTCTTCCCTGCCATCCCTCAGGTGACTCCTATTTGACAGTTGTGACCAG 2244
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2245 TGCTTTGTATTCATGGTTCTGTCTTCCTACATTGAAGCTCCTCCCACAGTGTTAGACGAACAAGCCTCAGGATC 2318
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2319 ACAGAGCCCAACAGGATGTGTGGTGCTGTTGTGACCCACACCATCACTGTCTATTTCTTTCCTCAGTTGTGCTC 2392
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2393 AGCCCAGGGTCATTCTGGGGATGGGTTCTATTTCCTTTAAATAGTGTCTCGGGTGGTGAGGGCTAACCTCAAAC 2466
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2467 TCGACATTAATACTGTATAGCTGAGGCTGGCCTTTGAACTGCAGATCTAGTTGCCTTCACCTCCGAAGTGCTGG 2540
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2541 ATTATAGGTGTGCGCCACTAGTAAACTCCATAAATACAAAGGGTTTGTTTCAGAGCCTCATCTTTTCCAGTTCT 2614
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2615 CACCTGCTTCCCTGGCTGCTGTCTACACTCTGACAGTTCCACTTTCAAGCTCAACTGAGTCTCGCCAAGCTGTC 2688
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2689 TTCCTGTTGATTCCAGCACTATTTGCAGAAATACACACATTCCACCTCACAACCACTTCTGAACTGGGAGCCAC 2762
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2763 TTGCAGTGTCTGTTAGAACCATCTTGTCTTTTCTTAGCTGTCCAATCCAGGTCATTGTTTTGATAGCCTAAAGC 2836
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2837 TCCACTTCACTTCTCCCACTCAGAAAGGAAGGTTTGTGGCCCTGGAGCACAAAGTAGCTTGAACTAAGATGGGA 2910
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2911 GGAGGCTGGCCTACGCAAAGAGGTAATGTCTTGTGGGCATCAGTGGCTGGGTCTAGGGGGTGCTTGAAGATACC 2984
Query 838 -------------------------------------------------------------------------- 837
Sbjct 2985 TAGTTTGGTTTTAGAACGCCTGGTTTTGAGAACCCCTAAAGCACGGGTCATTTGGGTCAGAGACAACGCAGAGG 3058
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3059 ATGTATTTATTTGTGGGAGGAGTTAGTGAACCCCAGAGCACAAGAAAATAATAATAATCGGCAGTGAAGGAGCA 3132
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3133 GGTTACAGGGAAAACAACCTGGGGTACAGGGATCCGGGAGTCCAAGAGCAAACGGTTATAGAGATGGGTTACAA 3206
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3207 GGTTGCTTGGAGGTAGCTCCAGGGTTACGTGTGCCTTGGTGAAGCCATGGGCTAAAGCTGAGTTCAGAGCCGCT 3280
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3281 CACCACCTGGCATTAGGGTTAGGGCAAGTTCTGGGAATGTGGCAGACTGTCAAAGGACAAAGCTATATACATCA 3354
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3355 AGCCACCACAAATGCAATGCATGGTGTGGTGTGGCCTGATGCCTTTCCCCCATCAGTGTGCCACACCTTACCTC 3428
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3429 GCCCTAGTGCAAAAGTTGACAGGTCCAAATACAAAGTATTTCAAAATTTGCTCTTTATTTACACGTTTGGGTCG 3502
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3503 ATTACATGCATGTTTTATTTTTAAACAAGTGATTAGCAAAAAATGCATTAAAGTTTTAAAATAGCAATTAAATA 3576
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3577 TACAAAAATATAGCTTACAAAAACCAATGTTTAAAAATATTCTGCTGCAGAATTCTTAGTGTACAAACACGTCT 3650
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3651 ATGAAACCTGAGGCTCAGCATTTCATAAACCTTTTTTGAGGGAGTTATATCTAGTAAATAAGCCCCATAGGGCT 3724
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3725 AAACGACAAGACTAAAGTGCCATTCCTCCACCTTCCTGGACATGTCCTCAGACAGAGGCAATGGCCCCAAGCCG 3798
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3799 TCACATTCTCCACCACAGCCTGGAAGGAGAGGCATGGACGGCGCTGAGGGTTCAACCACATGAGTCCCTTAACA 3872
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3873 CTGGTGAGGTCATGATCTGAGCTACAGCGTGTCTTTGAAACAGCAGGGGTAGCTTTTCCTGATCCTGTGAACAA 3946
Query 838 -------------------------------------------------------------------------- 837
Sbjct 3947 AGGAACGAAGAATTTGGATACGTGCTGAGCTAACTGGAATAAAAGCATCTTGAAATAATTTGGGTTCTAAAGCT 4020
Query 838 -------------------------------------------------------------------------- 837
Sbjct 4021 GAACTTGAAAACTGATAGGTCCTGTTAATCTTATTTAAAAAACCTTTACCTGGCATTTTAGGTCCCTACCTCTA 4094
Query 838 ----------------------------------------------------------------------- 837
Sbjct 4095 AGATTAAGTTAAATACTTTGATGGTCCCATTTAAGCAATTTTTTAAAAATAAAAATTTATTTTTATGTGTA 4165
