Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_04177
• Subject: XR_386375.3
• Aligned Length: 1358
• Identities: 598
• Gaps: 664

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGAGCAGAGTGCCCGCCACCTCTTCTGTCCCACCCGGTCGCGAGCGCGCGTGCGCGCGCGCGTTAGGACCCA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCGGGGTAGCCGCGGGACCCTGGAGTGGGCGTGACCTCCATTGTGACGCCACGGGGCGGGGCTTCCTCTGGCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGACTGAGGGACAGAAAGACCGACTGGCGCGGCGTGGCTGGTAAGGGACGCGGATTCAGCTCACTTTGGTTGCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTTCGCTGTCGGGCGGAGCCTCCCTGAGGAACGTGAAGACTTGGGGTCCAGGTCGGGATGGTGGCTGACTGCGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGGATAGCGGCGGCCATGTGGAGGTGACAGTCAGCTTGCGGACTCAGAGAGCCCAAAGGAGCTTGGCCCAGGTG  370

Query    1  -------------------------------------ATGGAGGCCGAGGGCCTGGACTGGCTCCTGGTGCCAC  37
                                                 |||||.||.||.|||.|||..|||||.|||||.||.|
Sbjct  371  GATATCGCTGGTTGGCAGCGCGGCCTCGGTGCTGGCGATGGAAGCGGAAGGCTTGGGATGGCTTCTGGTCCCGC  444

Query   38  TGCACCAGCTGGTGTCCTGGGGCGCGGCCGCGGCCATGGTCTTCGGAGGGGTGGTGCCCTACGTCCCGCAGTAT  111
            |||||||||||||.|||||||..||.||.|.|||||||||||||||||||||.||.||.|||.|.||.||.||.
Sbjct  445  TGCACCAGCTGGTTTCCTGGGTGGCCGCTGGGGCCATGGTCTTCGGAGGGGTAGTACCGTACATACCCCAATAC  518

Query  112  CGGGACATTCGCAGGACGCAGAACGCCGACGGCTTCTCCACCTACGTGTGCCTGGTGCTGCTGGTGGCCAACAT  185
            .|||||||.||.|||||.|||||.||||||||.|||||||||.|.||||||||||||||..||||||||||.||
Sbjct  519  AGGGACATCCGGAGGACTCAGAATGCCGACGGTTTCTCCACCCATGTGTGCCTGGTGCTATTGGTGGCCAATAT  592

Query  186  TTTGCGGATACTCTTCTGGTTTGGAAGGCGCTTTGAGTCCCCGCTGCTGTGGCAGAGCGCCATCATGATCCTGA  259
            |||.|||||||||||.|||||.|||||||.|||.|||||||||||.||||||||||||....||||||||||.|
Sbjct  593  TTTACGGATACTCTTTTGGTTCGGAAGGCACTTCGAGTCCCCGCTCCTGTGGCAGAGCATAGTCATGATCCTTA  666

Query  260  CCATGCTGCTGATGCTGAAGCTGTGCACCGAGGTCCGTGTGGCCAACGAGCTCAACGCCAGGCGCCGCTCCTTT  333
            |.|||.||||.|||||||||||.||||||||||||||.||||||||.|||||.|||..||.|||||||||||||
Sbjct  667  CGATGTTGCTCATGCTGAAGCTCTGCACCGAGGTCCGCGTGGCCAATGAGCTGAACATCAAGCGCCGCTCCTTT  740

Query  334  ACAGCTGCAGATAGCAAGGATGAAGAAGTCAAGGTTGCCCCCAGGCGGTCCTTCCTGGACTTCGACCCCCACCA  407
            .||||..||||.||.||||||||||||.|||..||..|||||||||||.|||.|||||||||.||.||.|||||
Sbjct  741  GCAGCCACAGACAGTAAGGATGAAGAACTCAGAGTGCCCCCCAGGCGGCCCTACCTGGACTTTGATCCTCACCA  814

Query  408  CTTCTGGCAGTGGAGCAGCTTCTCGGACTACGTGCAGTGCGTCCTGGCCTTCACGGGCGTGGCGGGCTACATCA  481
            |||||||||.||||||||||||||.|||||.||||||||.||||||||||||||||||||||||||||||||||
Sbjct  815  CTTCTGGCACTGGAGCAGCTTCTCAGACTATGTGCAGTGTGTCCTGGCCTTCACGGGCGTGGCGGGCTACATCA  888

Query  482  CCTACCTGTCCATTGACTCCGCCCTGTTTGTGGAGACCCTGGGCTTCCTGGCTGTGCTGACCGAAGCCATGCTG  555
            |||||||||||||.|||||.||.||||||||||||||.|||||||||||||||||||||||.||||||||||||
Sbjct  889  CCTACCTGTCCATCGACTCGGCTCTGTTTGTGGAGACGCTGGGCTTCCTGGCTGTGCTGACTGAAGCCATGCTG  962

Query  556  GGTGTGCCCCAGCTTTACCGCAACCACCGCCACCAGTCCACGGAGGGCATG-----------------------  606
            ||.|||||.|||||.|||||.|||.||.||||||..|||||||||||||||                       
Sbjct  963  GGGGTGCCACAGCTGTACCGAAACTACTGCCACCGCTCCACGGAGGGCATGAGCGGGACTCGCCATGACCTACC  1036

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1037  AAAGCTACAATGTCTGGCAGACGAGGATAGACTGTGTCTGGAGACATCTGTCTAGCACAGGACGGTTCCCATAG  1110

Query  607  -----------------------------------------AGCATCAAGATGGTGCTCATGTGGACCAGTGGT  639
                                                     |||.||||||||||||||||||||||.||||||
Sbjct 1111  ACCATTGGAAAGTCTTGAAGAAAACAGCGTTTATTCAGCGCAGCCTCAAGATGGTGCTCATGTGGACAAGTGGT  1184

Query  640  GACGCCTTCAAGACGGCCTACTTCCTGCTGAAGGGTGCCCCTCTGCAGTTCTCCGTGTGCGGCCTGCTGCAGGT  713
            |||.||||||||||||||||||||.||||.||.||.||.||||||||||||||.|                   
Sbjct 1185  GACACCTTCAAGACGGCCTACTTCTTGCTCAACGGCGCACCTCTGCAGTTCTCAG-------------------  1239

Query  714  GCTGGTGGACCTGGCCATCCTGGGGCAGGCCTACGCCTTCGCCCGCCACCCCCAGAAGCCGGCGCCCCACGCCG  787
                                                                                      
Sbjct 1240  --------------------------------------------------------------------------  1239

Query  788  TGCACCCCACTGGCACCAAGGCCCTC  813
                                      
Sbjct 1240  --------------------------  1239