Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_04228
• Subject: XR_923033.1
• Aligned Length: 1463
• Identities: 1088
• Gaps: 375

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCCGGGACTCTCCCTGCAGGTGACTGACGGCGCCGGCCGCCCCTGCCCGTCGCCCGCCCGCTGCTGCCGCCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCGGGGTGTGGAGCCCGGCCGCTGCTCGCGGGCTGAGTGTCTGTCGCTGCTGCCGCCTCCACCCAGCCTCCGC  148

Query    1  -ATGGACCTCTTCGGGGACCTGCCGGAGCCCGAGCGCTCGCCGCGCCCGGCTGCCGGGAAAGAAGCTCAGAAAG  73
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CATGGACCTCTTCGGGGACCTGCCGGAGCCCGAGCGCTCGCCGCGCCCGGCTGCCGGGAAAGAAGCTCAGAAAG  222

Query   74  GACCCCTGCTCTTTGATGACCTCCCTCCGGCCAGCAGTACTGACTCAGGATCAGGGGGACCTTTGCTTTTTGAT  147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACCCCTGCTCTTTGATGACCTCCCTCCGGCCAGCAGTACTGACTCAGGATCAGGGGGACCTTTGCTTTTTGAT  296

Query  148  GATCTCCCACCCGCTAGCAGTGGCGATTCAGGTTCTCTTGCCACATCAATATCCCAGATGGTAAAGACTGAAGG  221
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GATCTCCCACCCGCTAGCAGTGGCGATTCAGGTTCTCTTGCCACATCAATATCCCAGATGGTAAAGACTGAAGG  370

Query  222  GAAAGGAGCAAAGAGAAAAACCTCCGAGGAAGAGAAGAATGGCAGTGAAGAGCTTGTGGAAAAGAAAGTTTGTA  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAAAGGAGCAAAGAGAAAAACCTCCGAGGAAGAGAAGAATGGCAGTGAAGAGCTTGTGGAAAAGAAAGTTTGTA  444

Query  296  AAGCCTCTTCGGTGATCTTTGGTCTGAAGGGCTATGTGGCTGAGCGGAAGGGTGAGAGGGAGGAGATGCAGGAT  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAGCCTCTTCGGTGATCTTTGGTCTGAAGGGCTATGTGGCTGAGCGGAAGGGTGAGAGGGAGGAGATGCAGGAT  518

Query  370  GCCCACGTCATCCTGAACGACATCACCGAGGAGTGTAGGCCCCCATCGTCCCTCATTACTCGGGTTTCATATTT  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCCACGTCATCCTGAACGACATCACCGAGGAGTGTAGGCCCCCATCGTCCCTCATTACTCGGGTTTCATATTT  592

Query  444  TGCTGTTTTTGATGGACATGGAGGAATTCGAGCCTCAAAATTTGCTGCACAGAATTTGCATCAAAACTTAATCA  517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGCTGTTTTTGATGGACATGGAGGAATTCGAGCCTCAAAATTTGCTGCACAGAATTTGCATCAAAACTTAATCA  666

Query  518  GAAAATTTCCTAAAGGAGATGTAATCAGTGTAGAGAAAACCGTGAAGAGATGCCTTTTGGACACTTTCAAGCAT  591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAAAATTTCCTAAAGGAGATGTAATCAGTGTAGAGAAAACCGTGAAGAGATGCCTTTTGGACACTTTCAAGCAT  740

Query  592  ACTGATGAAGAGTTCCTTAAACAAGCTTCCAGCCAGAAGCCTGCCTGGAAAGATGGGTCCACTGCCACGTGTGT  665
            |||||||||||||||||||||||||||||||||||                                       
Sbjct  741  ACTGATGAAGAGTTCCTTAAACAAGCTTCCAGCCA---------------------------------------  775

Query  666  TCTGGCTGTAGACAACATTCTTTATATTGCCAACCTCGGAGATAGTCGGGCAATCTTGTGTCGTTATAATGAGG  739
                                                             |||||||||||||||||||||||||
Sbjct  776  -------------------------------------------------GCAATCTTGTGTCGTTATAATGAGG  800

Query  740  AGAGTCAAAAACATGCAGCCTTAAGCCTCAGCAAAGAGCATAATCCAACTCAGTATGAAGAGCGGATGAGGATA  813
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  801  AGAGTCAAAAACATGCAGCCTTAAGCCTCAGCAAAGAGCATAATCCAACTCAGTATGAAGAGCGGATGAGGATA  874

Query  814  CAGAAGGCTGGAGGAAACGTCAGGGATGGGCGTGTTTTGGGCGTGCTAGAGGTGTCACGCTCCATTGGGGACGG  887
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  875  CAGAAGGCTGGAGGAAACGTCAGGGATGGGCGTGTTTTGGGCGTGCTAGAGGTGTCACGCTCCATTGGGGACGG  948

Query  888  GCAGTACAAGCGCTGCGGTGTCACCTCTGTGCCCGACATCAGACGCTGCCAGCTGACCCCCAATGACAGGTTCA  961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  949  GCAGTACAAGCGCTGCGGTGTCACCTCTGTGCCCGACATCAGACGCTGCCAGCTGACCCCCAATGACAGGTTCA  1022

Query  962  TTTTGTTGGCCTGTGATGGGCTCTTCAAGGTCTTTACCCCAGAAGAAGCCGTGAACTTCATCTTGTCCTGTCTC  1035
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1023  TTTTGTTGGCCTGTGATGGGCTCTTCAAGGTCTTTACCCCAGAAGAAGCCGTGAACTTCATCTTGTCCTGTCTC  1096

Query 1036  GAGGATGAAAAGATCCAGACCCGGGAAGGGAAGTCCGCAGCCGACGCCCGCTACGAAGCAGCCTGCAACAGGCT  1109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1097  GAGGATGAAAAGATCCAGACCCGGGAAGGGAAGTCCGCAGCCGACGCCCGCTACGAAGCAGCCTGCAACAGGCT  1170

Query 1110  GGCCAACAAGGCGGTGCAGCGGGGCTCGGCCGACAACGTCACTGTGATGGTGGTGCGGATAGGGCAC-------  1176
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct 1171  GGCCAACAAGGCGGTGCAGCGGGGCTCGGCCGACAACGTCACTGTGATGGTGGTGCGGATAGGGCACTGAGGGG  1244

Query 1177  --------------------------------------------------------------------------  1176
                                                                                      
Sbjct 1245  TGGCGCGCGGCCAGGAGCACGCATGGTATTGACTTAAAAGGTTCATTTTGTGTGTGTGCACATTGTGTGTTTTG  1318

Query 1177  ---------------------------------------------------------  1176
                                                                     
Sbjct 1319  TGTACTCCTGTGGGACTCCCATGGTTGTAAATAAAGGTTTCTCTTTTTTTTTCCTAG  1375