Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_04236
- Subject:
- XR_002956647.1
- Aligned Length:
- 1500
- Identities:
- 553
- Gaps:
- 933
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACCACTAATTGAGGGAGTGAGGAAGAGAGCAGCTCGCTTCTAACTGGACTGCACGTTGGTGACAGCGTCCCAAG 74
Query 1 ----------------------------------------------------------ATGACCCTTGCTGCCT 16
||||||||||||||||
Sbjct 75 CTGGTGACAGACCCACTCTGTAACTTTCAGCTAGATTCAGCCACCAGATCCCAGAAACATGACCCTTGCTGCCT 148
Query 17 ACAAAGAGAAGATGAAGGAGCTCCCGCTGGTGTCCTTGTTCTGCTCCTGCTTCCTGGCCGATCCCCTGAATAAG 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ACAAAGAGAAGATGAAGGAGCTCCCGCTGGTGTCCTTGTTCTGCTCCTGCTTCCTGGCCGATCCCCTGAATAAG 222
Query 91 TCGTCCTACAAATATGAAGGCTGGTGTGGGAGACAGTGTAGGAGGAAGGATGAAAGCCAGCGGAAAGACAGTGC 164
||||||||||||||||||
Sbjct 223 TCGTCCTACAAATATGAA-------------------------------------------------------- 240
Query 165 TGACTGGAGAGAAAGAAGAGCTCAGGCAGACACGGTGGACCTGAATTGGTGCGTCATTTCCGACATGGAAGTCA 238
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 -------------------------GCAGACACGGTGGACCTGAATTGGTGCGTCATTTCCGACATGGAAGTCA 289
Query 239 TCGAGCTGAACAAATGCACCTCGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGGGTTCCC 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 290 TCGAGCTGAACAAATGCACCTCGGGCCAATCCTTTGAAGTCATCCTGAAGCCACCCTCCTTTGATGGGGTTCCC 363
Query 313 GAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATCCAGAAGAAACTAGAAGCGGCTGA 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 GAGTTCAACGCCTCCCTGCCAAGGCGGCGAGACCCATCCCTGGAAGAGATCCAGAAGAAACTAGAAGCGGCTGA 437
Query 387 GGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCTGAAACACCTAGCAGAGAAACGGGAACATGAGAGAGAGGTGA 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 438 GGAGCGAAGGAAGTACCAGGAAGCGGAGCTCCTGAAACACCTAGCAGAGAAACGGGAACATGAGAGAGAGGTGA 511
Query 461 TCCAAAAGGCCATTGAGGAAAACAACAACTTCATCAAGATGGCTAAGGAAAAACTGGCCCAGAAGATGGAATCC 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 512 TCCAAAAGGCCATTGAGGAAAACAACAACTTCATCAAGATGGCTAAGGAAAAACTGGCCCAGAAGATGGAATCC 585
Query 535 AACAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGCAAGAGAAGGACAAGCACGCC----- 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|.|....||
Sbjct 586 AACAAGGAGAACAGGGAGGCCCACCTCGCCGCCATGTTGGAACGGCTGCAAGAGAAGGTGAGGGGTCCCTGGCT 659
Query 604 ---GAGGAGGTGC---GGAAA-----------------AACAAGGA-----------GCTGA-----------A 632
||||||.|.| |||.| |.||||.| ||||| |
Sbjct 660 AGAGAGGAGTTTCCTGGGACATGCTGTTTTCCTTCTGCAGCAAGTATGCGGGGACCTGCTGATCATCTCAGGGA 733
Query 633 GGAAGAGGCCTC----------CAGG------------------------------------------------ 648
|||||..||||| ||||
Sbjct 734 GGAAGCAGCCTCAGGCAAAAATCAGGATCTTTTTCTTAGGCAGGATCTTTAGAGAGTTCCGAAGGATGATCAGG 807
Query 649 -------------------------------------------------------------------------- 648
Sbjct 808 GAAGTCAGAGGCAAGAAATAGGAACCAGACTCAGGGTTTCCTTGGGGGATATTCTGCACAGTTACACAATTAAA 881
Query 649 -------------------------------------------------------------------------- 648
Sbjct 882 ATCCTTCATTGCCTTAGGGAGCATATATGTCTGATTTTCTAGAAGAAGCCTGTCTAATACAAAGGAGTAGAGAT 955
Query 649 -------------------------------------------------------------------------- 648
Sbjct 956 AGACAAGCAGGTATGCATTCCTAGCTTCATCCCTGAATGGATTGATTTGATGGAAGGAAAGATGCTTTCTTGAG 1029
Query 649 -------------------------------------------------------------------------- 648
Sbjct 1030 CTCTTGGCTCTAAGTCACGGGTATGATGAGCTGAGATTCCCACTGAGCAGGAAACATGATTCTCTCTAAACCTC 1103
Query 649 -------------------------------------------------------------------------- 648
Sbjct 1104 TTGACACAGACCCAGTGAGTCACAGGTCTTTCCAATATGTTGCCTTTTGTCAATAAATGGAACGGTGTCACCTA 1177
Query 649 -------------------------------------------------------------------------- 648
Sbjct 1178 AATATGAGAAACATGAGGCCGGGGTTGGTTCTGTGTGTCAGCAGAATACCGGCCCGTTCTGCTGAGAACACGCT 1251
Query 649 -------------------------------------------------------------------------- 648
Sbjct 1252 GGCCTCATTTCCTGAGTCTCAAGGCCGCCCCAGTTTCTCCTGCAGCTCCTGGGAGAGCTCCAGCTCTGTGTTTT 1325
Query 649 -------------------------------------------------------------------------- 648
Sbjct 1326 ATTTCCAGGAACCGCCTGCTGCGCGGTGACTCCCGGGACCTGATCGGTGGCCTCGTCCCATGGACAAGCACGCC 1399
Query 649 -------------------- 648
Sbjct 1400 GAGGAGGTGCGGAAAAACAA 1419
